RNA–Protein interactions for RNA: ENST00000296953.6

CREBRF-201, Transcript of CREB3 regulatory factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CREBRF, Length 7,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CREBRF-201ENST00000296953 DCAF1Q9Y4B6 1507 aa5.74□□□□□ -1.49
CREBRF-201ENST00000296953 TTBK1Q5TCY1 1321 aaPredicted RBP5.73□□□□□ -1.49
CREBRF-201ENST00000296953 APLP2Q06481 763 aa5.66□□□□□ -1.5
CREBRF-201ENST00000296953 NISCHQ9Y2I1 1504 aa5.61□□□□□ -1.51
CREBRF-201ENST00000296953 SHROOM4Q9ULL8 1493 aa5.48□□□□□ -1.53
CREBRF-201ENST00000296953 PELP1Q8IZL8 1130 aaKnown RBP5.47□□□□□ -1.53
CREBRF-201ENST00000296953 MYO15BQ96JP2 1530 aa5.41□□□□□ -1.54
CREBRF-201ENST00000296953 MYT1Q01538 1121 aa5.38□□□□□ -1.55
CREBRF-201ENST00000296953 EIF4G1Q04637 1599 aaKnown RBP5.36□□□□□ -1.55
CREBRF-201ENST00000296953 CCDC180Q9P1Z9 1646 aa5.35□□□□□ -1.55
CREBRF-201ENST00000296953 SCRIBQ14160 1630 aa5.27□□□□□ -1.57
CREBRF-201ENST00000296953 CUX2O14529 1486 aa5.16□□□□□ -1.58
CREBRF-201ENST00000296953 WRNQ14191 1432 aaPredicted RBP eCLIP5.14□□□□□ -1.59
CREBRF-201ENST00000296953 HRCP23327 699 aa5.14□□□□□ -1.59
CREBRF-201ENST00000296953 ZCCHC6Q5VYS8 1495 aaKnown RBP5.11□□□□□ -1.59
CREBRF-201ENST00000296953 DAXXQ9UER7 740 aaPredicted RBP5.09□□□□□ -1.59
CREBRF-201ENST00000296953 LAMC1P11047 1609 aa5.04□□□□□ -1.6
CREBRF-201ENST00000296953 NCAPD3P42695 1498 aa5.04□□□□□ -1.6
CREBRF-201ENST00000296953 ZEB1P37275 1124 aaPredicted RBP4.97□□□□□ -1.61
CREBRF-201ENST00000296953 PRKCSHP14314 528 aaPredicted RBP4.94□□□□□ -1.62
CREBRF-201ENST00000296953 CLSPNQ9HAW4 1339 aa4.9□□□□□ -1.63
CREBRF-201ENST00000296953 C11orf95C9JLR9 678 aaPredicted RBP4.89□□□□□ -1.63
CREBRF-201ENST00000296953 ZMYM4Q5VZL5 1548 aa4.89□□□□□ -1.63
CREBRF-201ENST00000296953 KDM5BQ9UGL1 1544 aa4.88□□□□□ -1.63
CREBRF-201ENST00000296953 AEBP2Q6ZN18 517 aaPredicted RBP4.87□□□□□ -1.63
CREBRF-201ENST00000296953 PEG3Q9GZU2 1588 aa4.86□□□□□ -1.63
CREBRF-201ENST00000296953 ABCC9O60706 1549 aa4.86□□□□□ -1.63
CREBRF-201ENST00000296953 YEATS2Q9ULM3 1422 aa4.84□□□□□ -1.63
CREBRF-201ENST00000296953 SLC24A1O60721 1099 aa4.82□□□□□ -1.64
CREBRF-201ENST00000296953 ABCA5Q8WWZ7 1642 aa4.82□□□□□ -1.64
CREBRF-201ENST00000296953 ARHGAP31Q2M1Z3 1444 aa4.82□□□□□ -1.64
CREBRF-201ENST00000296953 CHRM1P11229 460 aaPredicted RBP4.82□□□□□ -1.64
CREBRF-201ENST00000296953 MAP3K1Q13233 1512 aa4.81□□□□□ -1.64
CREBRF-201ENST00000296953 SCAF1Q9H7N4 1312 aaKnown RBP4.8□□□□□ -1.64
CREBRF-201ENST00000296953 UBE2Q2Q8WVN8 375 aa4.77□□□□□ -1.65
CREBRF-201ENST00000296953 PLA2R1Q13018 1463 aa4.77□□□□□ -1.65
CREBRF-201ENST00000296953 CENPBP07199 599 aaPredicted RBP4.76□□□□□ -1.65
CREBRF-201ENST00000296953 TRIM41Q8WV44 630 aa4.76□□□□□ -1.65
CREBRF-201ENST00000296953 CCDC144AA2RUR9 1427 aa4.76□□□□□ -1.65
CREBRF-201ENST00000296953 RNF123Q5XPI4 1314 aa4.74□□□□□ -1.65
CREBRF-201ENST00000296953 ARXQ96QS3 562 aa4.73□□□□□ -1.65
CREBRF-201ENST00000296953 NCBP3Q53F19 620 aaKnown RBP4.73□□□□□ -1.65
CREBRF-201ENST00000296953 INSRP06213 1382 aa4.73□□□□□ -1.65
CREBRF-201ENST00000296953 WASHC2CQ9Y4E1 1318 aa4.72□□□□□ -1.65
CREBRF-201ENST00000296953 CEP170BQ9Y4F5 1589 aaPredicted RBP4.72□□□□□ -1.65
CREBRF-201ENST00000296953 SCAF11Q99590 1463 aaKnown RBP4.71□□□□□ -1.65
CREBRF-201ENST00000296953 VGFO15240 615 aaPredicted RBP4.71□□□□□ -1.65
CREBRF-201ENST00000296953 CECR2Q9BXF3 1484 aa4.71□□□□□ -1.66
CREBRF-201ENST00000296953 MYT1LQ9UL68 1186 aa4.71□□□□□ -1.66
CREBRF-201ENST00000296953 SCAPERQ9BY12 1400 aa4.7□□□□□ -1.66
CREBRF-201ENST00000296953 CHIC1Q5VXU3 224 aa4.69□□□□□ -1.66
CREBRF-201ENST00000296953 POLR1AO95602 1720 aaPredicted RBP4.69□□□□□ -1.66
CREBRF-201ENST00000296953 CENPJQ9HC77 1338 aaPredicted RBP4.69□□□□□ -1.66
CREBRF-201ENST00000296953 DISP1Q96F81 1524 aa4.68□□□□□ -1.66
CREBRF-201ENST00000296953 GAPVD1Q14C86 1478 aa4.68□□□□□ -1.66
CREBRF-201ENST00000296953 SMARCA2P51531 1590 aa4.68□□□□□ -1.66
CREBRF-201ENST00000296953 MYOM3Q5VTT5 1437 aa4.68□□□□□ -1.66
CREBRF-201ENST00000296953 WASHC2AQ641Q2 1341 aa4.68□□□□□ -1.66
CREBRF-201ENST00000296953 ERICH6BQ5W0A0 696 aa4.67□□□□□ -1.66
CREBRF-201ENST00000296953 RAD50Q92878 1312 aa4.65□□□□□ -1.66
CREBRF-201ENST00000296953 CFAP65Q6ZU64 1925 aaKnown RBP4.64□□□□□ -1.67
CREBRF-201ENST00000296953 IGF1RP08069 1367 aa4.64□□□□□ -1.67
CREBRF-201ENST00000296953 CCER1Q8TC90 406 aaPredicted RBP4.64□□□□□ -1.67
CREBRF-201ENST00000296953 PPRC1Q5VV67 1664 aaKnown RBP4.63□□□□□ -1.67
CREBRF-201ENST00000296953 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.63□□□□□ -1.678e-6■■□□□ 13
CREBRF-201ENST00000296953 ERICH6Q7L0X2 663 aa4.62□□□□□ -1.67
CREBRF-201ENST00000296953 THOC2Q8NI27 1593 aaKnown RBP4.62□□□□□ -1.67
CREBRF-201ENST00000296953 FANCIQ9NVI1 1328 aa4.61□□□□□ -1.67
CREBRF-201ENST00000296953 FAM9AQ8IZU1 332 aaPredicted RBP4.6□□□□□ -1.67
CREBRF-201ENST00000296953 NACADO15069 1562 aa4.6□□□□□ -1.67
CREBRF-201ENST00000296953 KIF21BO75037 1637 aa4.6□□□□□ -1.67
CREBRF-201ENST00000296953 RB1CC1Q8TDY2 1594 aa4.6□□□□□ -1.67
CREBRF-201ENST00000296953 TRIM26Q12899 539 aaPredicted RBP4.6□□□□□ -1.67
CREBRF-201ENST00000296953 UHRF1BP1LA0JNW5 1464 aa4.6□□□□□ -1.67
CREBRF-201ENST00000296953 NCOA2Q15596 1464 aa4.58□□□□□ -1.68
CREBRF-201ENST00000296953 SHROOM2Q13796 1616 aa4.58□□□□□ -1.68
CREBRF-201ENST00000296953 PTPRGP23470 1445 aa4.58□□□□□ -1.68
CREBRF-201ENST00000296953 MMP14P50281 582 aa4.58□□□□□ -1.68
CREBRF-201ENST00000296953 ARID3AQ99856 593 aa4.58□□□□□ -1.68
CREBRF-201ENST00000296953 ARHGEF11O15085 1522 aa4.57□□□□□ -1.68
CREBRF-201ENST00000296953 SYNJ1O43426 1573 aa4.57□□□□□ -1.68
CREBRF-201ENST00000296953 YTHDC1Q96MU7 727 aaKnown RBP4.57□□□□□ -1.68
CREBRF-201ENST00000296953 ACIN1Q9UKV3 1341 aaKnown RBP4.57□□□□□ -1.68
CREBRF-201ENST00000296953 IBTKQ9P2D0 1353 aaPredicted RBP4.56□□□□□ -1.68
CREBRF-201ENST00000296953 VIRMAQ69YN4 1812 aaKnown RBP4.56□□□□□ -1.68
CREBRF-201ENST00000296953 MKL1Q969V6 931 aa4.55□□□□□ -1.68
CREBRF-201ENST00000296953 SLC20A2Q08357 652 aa4.54□□□□□ -1.68
CREBRF-201ENST00000296953 EEA1Q15075 1411 aa4.54□□□□□ -1.68
CREBRF-201ENST00000296953 AKNAQ7Z591 1439 aa4.54□□□□□ -1.68
CREBRF-201ENST00000296953 RRBP1Q9P2E9 1410 aaKnown RBP4.53□□□□□ -1.68
CREBRF-201ENST00000296953 BCL11AQ9H165 835 aa4.52□□□□□ -1.69
CREBRF-201ENST00000296953 ZMYM3Q14202 1370 aa4.52□□□□□ -1.69
CREBRF-201ENST00000296953 KIAA1107Q9UPP5 1409 aa4.52□□□□□ -1.69
CREBRF-201ENST00000296953 BAZ1BQ9UIG0 1483 aaKnown RBP4.52□□□□□ -1.69
CREBRF-201ENST00000296953 ARHGEF12Q9NZN5 1544 aa4.51□□□□□ -1.69
CREBRF-201ENST00000296953 DENND4BO75064 1496 aaPredicted RBP4.5□□□□□ -1.69
CREBRF-201ENST00000296953 E9PCH4 1651 aa4.5□□□□□ -1.69
CREBRF-201ENST00000296953 HMGXB3Q12766 1538 aa4.5□□□□□ -1.69
CREBRF-201ENST00000296953 RSPH4AQ5TD94 716 aa4.5□□□□□ -1.69
CREBRF-201ENST00000296953 MAPKBP1O60336 1514 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms