RNA–Protein interactions for RNA: ENST00000265663.12

NSMF-201, Transcript of NMDA receptor synaptonuclear signaling and neuronal migration factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NSMF, Length 2,981 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMF-201ENST00000265663 NISCHQ9Y2I1 1504 aa39.34■■■■□ 3.89
NSMF-201ENST00000265663 SHROOM4Q9ULL8 1493 aa34.48■■■■□ 3.11
NSMF-201ENST00000265663 SUPT5HO00267 1087 aaKnown RBP33.84■■■■□ 3.01
NSMF-201ENST00000265663 DCAF8L2P0C7V8 631 aa33.7■■■□□ 2.99
NSMF-201ENST00000265663 HRCP23327 699 aa33.55■■■□□ 2.96
NSMF-201ENST00000265663 ZCCHC6Q5VYS8 1495 aaKnown RBP33.2■■■□□ 2.91
NSMF-201ENST00000265663 PELP1Q8IZL8 1130 aaKnown RBP33.15■■■□□ 2.9
NSMF-201ENST00000265663 CCDC180Q9P1Z9 1646 aa33.05■■■□□ 2.88
NSMF-201ENST00000265663 PPARGC1BQ86YN6 1023 aaKnown RBP33.04■■■□□ 2.88
NSMF-201ENST00000265663 PCGF6Q9BYE7 350 aa32.77■■■□□ 2.84
NSMF-201ENST00000265663 CHIC1Q5VXU3 224 aa32.49■■■□□ 2.79
NSMF-201ENST00000265663 MYO15BQ96JP2 1530 aa32.37■■■□□ 2.77
NSMF-201ENST00000265663 SCAF1Q9H7N4 1312 aaKnown RBP32.14■■■□□ 2.74
NSMF-201ENST00000265663 MYT1Q01538 1121 aa31.98■■■□□ 2.71
NSMF-201ENST00000265663 LOC105371045A0A1W2PR82 267 aa31.89■■■□□ 2.69
NSMF-201ENST00000265663 DCAF1Q9Y4B6 1507 aa31.86■■■□□ 2.69
NSMF-201ENST00000265663 SCRIBQ14160 1630 aa31.64■■■□□ 2.66
NSMF-201ENST00000265663 EHMT2Q96KQ7 1210 aa31.5■■■□□ 2.63
NSMF-201ENST00000265663 ABCC9O60706 1549 aa31.42■■■□□ 2.62
NSMF-201ENST00000265663 FAM9AQ8IZU1 332 aaPredicted RBP31.42■■■□□ 2.62
NSMF-201ENST00000265663 TRIM26Q12899 539 aaPredicted RBP31.38■■■□□ 2.61
NSMF-201ENST00000265663 RSF1Q96T23 1441 aaPredicted RBP31.3■■■□□ 2.6
NSMF-201ENST00000265663 TRIM41Q8WV44 630 aa31.26■■■□□ 2.59
NSMF-201ENST00000265663 ZEB1P37275 1124 aaPredicted RBP31.25■■■□□ 2.59
NSMF-201ENST00000265663 ACIN1Q9UKV3 1341 aaKnown RBP31.13■■■□□ 2.57
NSMF-201ENST00000265663 NEUROD1Q13562 356 aa31.08■■■□□ 2.57
NSMF-201ENST00000265663 RB1CC1Q8TDY2 1594 aa31.05■■■□□ 2.56
NSMF-201ENST00000265663 GTF3C3Q9Y5Q9 886 aa31.01■■■□□ 2.55
NSMF-201ENST00000265663 CECR2Q9BXF3 1484 aa30.99■■■□□ 2.55
NSMF-201ENST00000265663 MROH2BQ7Z745 1585 aa30.77■■■□□ 2.52
NSMF-201ENST00000265663 NACADO15069 1562 aa30.72■■■□□ 2.51
NSMF-201ENST00000265663 CENPBP07199 599 aaPredicted RBP30.69■■■□□ 2.5
NSMF-201ENST00000265663 WIZO95785 1651 aa30.62■■■□□ 2.49
NSMF-201ENST00000265663 TTBK1Q5TCY1 1321 aaPredicted RBP30.42■■■□□ 2.46
NSMF-201ENST00000265663 DIEXFQ68CQ4 756 aaKnown RBP30.35■■■□□ 2.45
NSMF-201ENST00000265663 PABPN1Q86U42 306 aaKnown RBP eCLIP30.33■■■□□ 2.457e-9■■■□□ 15.8
NSMF-201ENST00000265663 BAZ1AQ9NRL2 1556 aaPredicted RBP30.17■■■□□ 2.42
NSMF-201ENST00000265663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.16■■■□□ 2.42
NSMF-201ENST00000265663 YTHDC1Q96MU7 727 aaKnown RBP30.13■■■□□ 2.41
NSMF-201ENST00000265663 ABCC8Q09428 1581 aa30.12■■■□□ 2.41
NSMF-201ENST00000265663 CCER1Q8TC90 406 aaPredicted RBP30.11■■■□□ 2.41
NSMF-201ENST00000265663 BCL11AQ9H165 835 aa30.06■■■□□ 2.4
NSMF-201ENST00000265663 CCDC88BA6NC98 1476 aa30■■■□□ 2.39
NSMF-201ENST00000265663 SMARCA4P51532 1647 aa29.93■■■□□ 2.38
NSMF-201ENST00000265663 UBTFP17480 764 aaKnown RBP29.91■■■□□ 2.38
NSMF-201ENST00000265663 TOP2AP11388 1531 aaKnown RBP29.89■■■□□ 2.38
NSMF-201ENST00000265663 SOGA1O94964 1423 aa29.88■■■□□ 2.37
NSMF-201ENST00000265663 UNC13AQ9UPW8 1703 aa29.85■■■□□ 2.37
NSMF-201ENST00000265663 EIF4G1Q04637 1599 aaKnown RBP29.83■■■□□ 2.37
NSMF-201ENST00000265663 SMARCA2P51531 1590 aa29.81■■■□□ 2.36
NSMF-201ENST00000265663 RANGAP1P46060 587 aaPredicted RBP29.76■■■□□ 2.35
NSMF-201ENST00000265663 RUSC2Q8N2Y8 1516 aa29.75■■■□□ 2.35
NSMF-201ENST00000265663 CSRNP3Q8WYN3 585 aa29.69■■■□□ 2.34
NSMF-201ENST00000265663 ANP32EQ9BTT0 268 aa29.67■■■□□ 2.34
NSMF-201ENST00000265663 CEP162Q5TB80 1403 aa29.66■■■□□ 2.34
NSMF-201ENST00000265663 ZNF316A6NFI3 1004 aaPredicted RBP29.55■■■□□ 2.32
NSMF-201ENST00000265663 MIER1Q8N108 512 aa29.52■■■□□ 2.32
NSMF-201ENST00000265663 BICRAQ9NZM4 1560 aa29.52■■■□□ 2.32
NSMF-201ENST00000265663 WRNQ14191 1432 aaPredicted RBP eCLIP29.47■■■□□ 2.31
NSMF-201ENST00000265663 TNIKQ9UKE5 1360 aa29.44■■■□□ 2.3
NSMF-201ENST00000265663 HNRNPUL2Q1KMD3 747 aaKnown RBP29.38■■■□□ 2.29
NSMF-201ENST00000265663 TSHZ2Q9NRE2 1034 aa29.32■■■□□ 2.28
NSMF-201ENST00000265663 GOLGA3Q08378 1498 aa29.3■■■□□ 2.28
NSMF-201ENST00000265663 SUPT16HQ9Y5B9 1047 aaKnown RBP29.29■■■□□ 2.28
NSMF-201ENST00000265663 BAZ1BQ9UIG0 1483 aaKnown RBP29.28■■■□□ 2.28
NSMF-201ENST00000265663 EEA1Q15075 1411 aa29.26■■■□□ 2.27
NSMF-201ENST00000265663 ATAD2BQ9ULI0 1458 aa29.26■■■□□ 2.27
NSMF-201ENST00000265663 SYNJ1O43426 1573 aa29.25■■■□□ 2.27
NSMF-201ENST00000265663 PRKCSHP14314 528 aaPredicted RBP29.22■■■□□ 2.27
NSMF-201ENST00000265663 APLP2Q06481 763 aa29.18■■■□□ 2.26
NSMF-201ENST00000265663 CLIP1P30622 1438 aa29.12■■■□□ 2.25
NSMF-201ENST00000265663 CEP164Q9UPV0 1460 aa29.08■■■□□ 2.25
NSMF-201ENST00000265663 RAPGEF2Q9Y4G8 1499 aa29.06■■■□□ 2.24
NSMF-201ENST00000265663 PEG3Q9GZU2 1588 aa29.05■■■□□ 2.24
NSMF-201ENST00000265663 CLSPNQ9HAW4 1339 aa28.98■■■□□ 2.23
NSMF-201ENST00000265663 VPS8Q8N3P4 1428 aa28.86■■■□□ 2.21
NSMF-201ENST00000265663 KIF21BO75037 1637 aa28.84■■■□□ 2.21
NSMF-201ENST00000265663 BCANQ96GW7 911 aa28.82■■■□□ 2.2
NSMF-201ENST00000265663 ITGAEP38570 1179 aa28.75■■■□□ 2.19
NSMF-201ENST00000265663 KANK4Q5T7N3 995 aaPredicted RBP28.72■■■□□ 2.19
NSMF-201ENST00000265663 TOP2BQ02880 1626 aa28.7■■■□□ 2.18
NSMF-201ENST00000265663 RBM19Q9Y4C8 960 aaKnown RBP28.61■■■□□ 2.17
NSMF-201ENST00000265663 CUX1P39880 1505 aa28.59■■■□□ 2.17
NSMF-201ENST00000265663 NCAPD3P42695 1498 aa28.53■■■□□ 2.16
NSMF-201ENST00000265663 KIF27Q86VH2 1401 aa28.52■■■□□ 2.16
NSMF-201ENST00000265663 ATP1B4Q9UN42 357 aaPredicted RBP28.52■■■□□ 2.16
NSMF-201ENST00000265663 PRXQ9BXM0 1461 aa28.5■■■□□ 2.15
NSMF-201ENST00000265663 ARAP1Q96P48 1450 aa28.5■■■□□ 2.15
NSMF-201ENST00000265663 FKBP8Q14318 412 aa28.5■■■□□ 2.15
NSMF-201ENST00000265663 ERICH6Q7L0X2 663 aa28.48■■■□□ 2.15
NSMF-201ENST00000265663 P3H3Q8IVL6 736 aa28.48■■■□□ 2.15
NSMF-201ENST00000265663 BIVM-ERCC5R4GMW8 1640 aa28.48■■■□□ 2.15
NSMF-201ENST00000265663 HMGXB3Q12766 1538 aa28.4■■■□□ 2.14
NSMF-201ENST00000265663 MSH5O43196 834 aa28.39■■■□□ 2.14
NSMF-201ENST00000265663 CUX2O14529 1486 aa28.38■■■□□ 2.13
NSMF-201ENST00000265663 CFTRP13569 1480 aa28.38■■■□□ 2.13
NSMF-201ENST00000265663 ERICH3Q5RHP9 1530 aa28.36■■■□□ 2.13
NSMF-201ENST00000265663 KCNH8Q96L42 1107 aa28.32■■■□□ 2.12
NSMF-201ENST00000265663 DHX57Q6P158 1386 aaKnown RBP28.31■■■□□ 2.12
NSMF-201ENST00000265663 ARHGAP35Q9NRY4 1499 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms