RNA–Protein interactions for RNA: ENST00000371475.8

NSMF-206, Transcript of NMDA receptor synaptonuclear signaling and neuronal migration factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NSMF, Length 2,987 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMF-206ENST00000371475 NISCHQ9Y2I1 1504 aa40.37■■■■■ 4.05
NSMF-206ENST00000371475 SHROOM4Q9ULL8 1493 aa35.31■■■■□ 3.24
NSMF-206ENST00000371475 DCAF8L2P0C7V8 631 aa34.69■■■■□ 3.14
NSMF-206ENST00000371475 SUPT5HO00267 1087 aaKnown RBP34.57■■■■□ 3.13
NSMF-206ENST00000371475 ZCCHC6Q5VYS8 1495 aaKnown RBP34.03■■■■□ 3.04
NSMF-206ENST00000371475 CCDC180Q9P1Z9 1646 aa33.94■■■■□ 3.02
NSMF-206ENST00000371475 HRCP23327 699 aa33.55■■■□□ 2.96
NSMF-206ENST00000371475 PELP1Q8IZL8 1130 aaKnown RBP33.15■■■□□ 2.9
NSMF-206ENST00000371475 CHIC1Q5VXU3 224 aa33.11■■■□□ 2.89
NSMF-206ENST00000371475 PPARGC1BQ86YN6 1023 aaKnown RBP33.04■■■□□ 2.88
NSMF-206ENST00000371475 MYO15BQ96JP2 1530 aa32.94■■■□□ 2.86
NSMF-206ENST00000371475 PCGF6Q9BYE7 350 aa32.77■■■□□ 2.84
NSMF-206ENST00000371475 DCAF1Q9Y4B6 1507 aa32.66■■■□□ 2.82
NSMF-206ENST00000371475 LOC105371045A0A1W2PR82 267 aa32.52■■■□□ 2.8
NSMF-206ENST00000371475 SCRIBQ14160 1630 aa32.52■■■□□ 2.8
NSMF-206ENST00000371475 ABCC9O60706 1549 aa32.5■■■□□ 2.79
NSMF-206ENST00000371475 EHMT2Q96KQ7 1210 aa32.23■■■□□ 2.75
NSMF-206ENST00000371475 SCAF1Q9H7N4 1312 aaKnown RBP32.14■■■□□ 2.74
NSMF-206ENST00000371475 FAM9AQ8IZU1 332 aaPredicted RBP32.12■■■□□ 2.73
NSMF-206ENST00000371475 RSF1Q96T23 1441 aaPredicted RBP32.08■■■□□ 2.73
NSMF-206ENST00000371475 MYT1Q01538 1121 aa31.98■■■□□ 2.71
NSMF-206ENST00000371475 TRIM41Q8WV44 630 aa31.91■■■□□ 2.7
NSMF-206ENST00000371475 CECR2Q9BXF3 1484 aa31.86■■■□□ 2.69
NSMF-206ENST00000371475 RB1CC1Q8TDY2 1594 aa31.78■■■□□ 2.68
NSMF-206ENST00000371475 NACADO15069 1562 aa31.6■■■□□ 2.65
NSMF-206ENST00000371475 MROH2BQ7Z745 1585 aa31.6■■■□□ 2.65
NSMF-206ENST00000371475 WIZO95785 1651 aa31.43■■■□□ 2.62
NSMF-206ENST00000371475 TRIM26Q12899 539 aaPredicted RBP31.38■■■□□ 2.61
NSMF-206ENST00000371475 PABPN1Q86U42 306 aaKnown RBP eCLIP31.37■■■□□ 2.617e-9■■■□□ 15.8
NSMF-206ENST00000371475 ZEB1P37275 1124 aaPredicted RBP31.25■■■□□ 2.59
NSMF-206ENST00000371475 ACIN1Q9UKV3 1341 aaKnown RBP31.13■■■□□ 2.57
NSMF-206ENST00000371475 NEUROD1Q13562 356 aa31.08■■■□□ 2.57
NSMF-206ENST00000371475 TTBK1Q5TCY1 1321 aaPredicted RBP31.06■■■□□ 2.56
NSMF-206ENST00000371475 GTF3C3Q9Y5Q9 886 aa31.01■■■□□ 2.55
NSMF-206ENST00000371475 BAZ1AQ9NRL2 1556 aaPredicted RBP30.95■■■□□ 2.54
NSMF-206ENST00000371475 ABCC8Q09428 1581 aa30.86■■■□□ 2.53
NSMF-206ENST00000371475 CCDC88BA6NC98 1476 aa30.79■■■□□ 2.52
NSMF-206ENST00000371475 UNC13AQ9UPW8 1703 aa30.79■■■□□ 2.52
NSMF-206ENST00000371475 SMARCA4P51532 1647 aa30.74■■■□□ 2.51
NSMF-206ENST00000371475 CENPBP07199 599 aaPredicted RBP30.69■■■□□ 2.5
NSMF-206ENST00000371475 TOP2AP11388 1531 aaKnown RBP30.64■■■□□ 2.5
NSMF-206ENST00000371475 SOGA1O94964 1423 aa30.58■■■□□ 2.49
NSMF-206ENST00000371475 SMARCA2P51531 1590 aa30.57■■■□□ 2.48
NSMF-206ENST00000371475 UBTFP17480 764 aaKnown RBP30.56■■■□□ 2.48
NSMF-206ENST00000371475 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.53■■■□□ 2.48
NSMF-206ENST00000371475 EIF4G1Q04637 1599 aaKnown RBP30.52■■■□□ 2.48
NSMF-206ENST00000371475 RANGAP1P46060 587 aaPredicted RBP30.5■■■□□ 2.47
NSMF-206ENST00000371475 RUSC2Q8N2Y8 1516 aa30.49■■■□□ 2.47
NSMF-206ENST00000371475 BICRAQ9NZM4 1560 aa30.46■■■□□ 2.47
NSMF-206ENST00000371475 CSRNP3Q8WYN3 585 aa30.36■■■□□ 2.45
NSMF-206ENST00000371475 DIEXFQ68CQ4 756 aaKnown RBP30.35■■■□□ 2.45
NSMF-206ENST00000371475 CCER1Q8TC90 406 aaPredicted RBP30.31■■■□□ 2.44
NSMF-206ENST00000371475 CEP162Q5TB80 1403 aa30.24■■■□□ 2.43
NSMF-206ENST00000371475 WRNQ14191 1432 aaPredicted RBP eCLIP30.18■■■□□ 2.42
NSMF-206ENST00000371475 YTHDC1Q96MU7 727 aaKnown RBP30.13■■■□□ 2.41
NSMF-206ENST00000371475 ATAD2BQ9ULI0 1458 aa30.11■■■□□ 2.41
NSMF-206ENST00000371475 BAZ1BQ9UIG0 1483 aaKnown RBP30.09■■■□□ 2.41
NSMF-206ENST00000371475 BCL11AQ9H165 835 aa30.06■■■□□ 2.4
NSMF-206ENST00000371475 TNIKQ9UKE5 1360 aa30.02■■■□□ 2.4
NSMF-206ENST00000371475 SYNJ1O43426 1573 aa29.98■■■□□ 2.39
NSMF-206ENST00000371475 HNRNPUL2Q1KMD3 747 aaKnown RBP29.94■■■□□ 2.38
NSMF-206ENST00000371475 GOLGA3Q08378 1498 aa29.89■■■□□ 2.37
NSMF-206ENST00000371475 PEG3Q9GZU2 1588 aa29.84■■■□□ 2.37
NSMF-206ENST00000371475 EEA1Q15075 1411 aa29.83■■■□□ 2.37
NSMF-206ENST00000371475 RAPGEF2Q9Y4G8 1499 aa29.75■■■□□ 2.35
NSMF-206ENST00000371475 CLIP1P30622 1438 aa29.73■■■□□ 2.35
NSMF-206ENST00000371475 APLP2Q06481 763 aa29.72■■■□□ 2.35
NSMF-206ENST00000371475 CEP164Q9UPV0 1460 aa29.69■■■□□ 2.34
NSMF-206ENST00000371475 ANP32EQ9BTT0 268 aa29.67■■■□□ 2.34
NSMF-206ENST00000371475 ZNF316A6NFI3 1004 aaPredicted RBP29.55■■■□□ 2.32
NSMF-206ENST00000371475 MIER1Q8N108 512 aa29.52■■■□□ 2.32
NSMF-206ENST00000371475 KIF21BO75037 1637 aa29.43■■■□□ 2.3
NSMF-206ENST00000371475 VPS8Q8N3P4 1428 aa29.42■■■□□ 2.3
NSMF-206ENST00000371475 TOP2BQ02880 1626 aa29.4■■■□□ 2.3
NSMF-206ENST00000371475 NCAPD3P42695 1498 aa29.38■■■□□ 2.29
NSMF-206ENST00000371475 KANK4Q5T7N3 995 aaPredicted RBP29.37■■■□□ 2.29
NSMF-206ENST00000371475 ITGAEP38570 1179 aa29.37■■■□□ 2.29
NSMF-206ENST00000371475 CUX1P39880 1505 aa29.35■■■□□ 2.29
NSMF-206ENST00000371475 TSHZ2Q9NRE2 1034 aa29.32■■■□□ 2.28
NSMF-206ENST00000371475 SUPT16HQ9Y5B9 1047 aaKnown RBP29.29■■■□□ 2.28
NSMF-206ENST00000371475 P3H3Q8IVL6 736 aa29.24■■■□□ 2.27
NSMF-206ENST00000371475 ATP1B4Q9UN42 357 aaPredicted RBP29.22■■■□□ 2.27
NSMF-206ENST00000371475 PRKCSHP14314 528 aaPredicted RBP29.22■■■□□ 2.27
NSMF-206ENST00000371475 KIF27Q86VH2 1401 aa29.21■■■□□ 2.27
NSMF-206ENST00000371475 HMGXB3Q12766 1538 aa29.2■■■□□ 2.26
NSMF-206ENST00000371475 CFTRP13569 1480 aa29.18■■■□□ 2.26
NSMF-206ENST00000371475 PRXQ9BXM0 1461 aa29.18■■■□□ 2.26
NSMF-206ENST00000371475 BIVM-ERCC5R4GMW8 1640 aa29.17■■■□□ 2.26
NSMF-206ENST00000371475 ARAP1Q96P48 1450 aa29.14■■■□□ 2.26
NSMF-206ENST00000371475 CUX2O14529 1486 aa29.13■■■□□ 2.25
NSMF-206ENST00000371475 CADPSQ9ULU8 1353 aa29.03■■■□□ 2.24
NSMF-206ENST00000371475 IGF1RP08069 1367 aa28.99■■■□□ 2.23
NSMF-206ENST00000371475 CLSPNQ9HAW4 1339 aa28.98■■■□□ 2.23
NSMF-206ENST00000371475 ERICH3Q5RHP9 1530 aa28.96■■■□□ 2.23
NSMF-206ENST00000371475 DNAJC5BQ9UF47 199 aa28.94■■■□□ 2.22
NSMF-206ENST00000371475 ARHGAP35Q9NRY4 1499 aa28.93■■■□□ 2.22
NSMF-206ENST00000371475 FGD5Q6ZNL6 1462 aa28.93■■■□□ 2.22
NSMF-206ENST00000371475 CARMIL1Q5VZK9 1371 aa28.92■■■□□ 2.22
NSMF-206ENST00000371475 CC2D2AQ9P2K1 1620 aa28.91■■■□□ 2.22
NSMF-206ENST00000371475 NESP48681 1621 aa28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms