RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 NISCHQ9Y2I1 1504 aa37.37■■■■□ 3.57
CCDC144NL-202ENST00000539177 ABCC9O60706 1549 aa34.2■■■■□ 3.06
CCDC144NL-202ENST00000539177 CCDC180Q9P1Z9 1646 aa33.79■■■■□ 3
CCDC144NL-202ENST00000539177 DNAJC5BQ9UF47 199 aa32.37■■■□□ 2.77
CCDC144NL-202ENST00000539177 RB1CC1Q8TDY2 1594 aa32.33■■■□□ 2.77
CCDC144NL-202ENST00000539177 NACADO15069 1562 aa31.96■■■□□ 2.71
CCDC144NL-202ENST00000539177 UNC13AQ9UPW8 1703 aa31.78■■■□□ 2.68
CCDC144NL-202ENST00000539177 DCAF8L2P0C7V8 631 aa31.75■■■□□ 2.67
CCDC144NL-202ENST00000539177 PABPN1Q86U42 306 aaKnown RBP eCLIP31.72■■■□□ 2.67
CCDC144NL-202ENST00000539177 BICRAQ9NZM4 1560 aa31.43■■■□□ 2.62
CCDC144NL-202ENST00000539177 MYO15BQ96JP2 1530 aa31.31■■■□□ 2.6
CCDC144NL-202ENST00000539177 ZCCHC6Q5VYS8 1495 aaKnown RBP30.9■■■□□ 2.54
CCDC144NL-202ENST00000539177 CC2D2AQ9P2K1 1620 aa30.88■■■□□ 2.53
CCDC144NL-202ENST00000539177 SHROOM4Q9ULL8 1493 aa30.83■■■□□ 2.53
CCDC144NL-202ENST00000539177 SCRIBQ14160 1630 aa30.83■■■□□ 2.53
CCDC144NL-202ENST00000539177 CECR2Q9BXF3 1484 aa30.8■■■□□ 2.52
CCDC144NL-202ENST00000539177 DCAF1Q9Y4B6 1507 aa30.78■■■□□ 2.52
CCDC144NL-202ENST00000539177 EIF4G1Q04637 1599 aaKnown RBP30.69■■■□□ 2.5
CCDC144NL-202ENST00000539177 DNAJC5Q9H3Z4 198 aa29.97■■■□□ 2.39
CCDC144NL-202ENST00000539177 CUX2O14529 1486 aa29.56■■■□□ 2.32
CCDC144NL-202ENST00000539177 ERCC6Q03468 1493 aa29.54■■■□□ 2.32
CCDC144NL-202ENST00000539177 NCAPD3P42695 1498 aa29.46■■■□□ 2.31
CCDC144NL-202ENST00000539177 ATAD2BQ9ULI0 1458 aa29.36■■■□□ 2.29
CCDC144NL-202ENST00000539177 SMARCA4P51532 1647 aa29.31■■■□□ 2.28
CCDC144NL-202ENST00000539177 SMARCA2P51531 1590 aa29.27■■■□□ 2.28
CCDC144NL-202ENST00000539177 HMGXB3Q12766 1538 aa29.27■■■□□ 2.28
CCDC144NL-202ENST00000539177 NESP48681 1621 aa29.27■■■□□ 2.28
CCDC144NL-202ENST00000539177 BAZ1BQ9UIG0 1483 aaKnown RBP29.1■■■□□ 2.25
CCDC144NL-202ENST00000539177 THOC2Q8NI27 1593 aaKnown RBP29.08■■■□□ 2.25
CCDC144NL-202ENST00000539177 BAZ1AQ9NRL2 1556 aaPredicted RBP29.05■■■□□ 2.24
CCDC144NL-202ENST00000539177 KIF21AQ7Z4S6 1674 aa28.97■■■□□ 2.23
CCDC144NL-202ENST00000539177 PEG3Q9GZU2 1588 aa28.95■■■□□ 2.22
CCDC144NL-202ENST00000539177 LAMC3Q9Y6N6 1575 aa28.95■■■□□ 2.22
CCDC144NL-202ENST00000539177 MROH2BQ7Z745 1585 aa28.84■■■□□ 2.21
CCDC144NL-202ENST00000539177 PDS5BQ9NTI5 1447 aa28.73■■■□□ 2.19
CCDC144NL-202ENST00000539177 TRIM41Q8WV44 630 aa28.6■■■□□ 2.17
CCDC144NL-202ENST00000539177 MRC2Q9UBG0 1479 aa28.57■■■□□ 2.16
CCDC144NL-202ENST00000539177 CADPSQ9ULU8 1353 aa28.55■■■□□ 2.16
CCDC144NL-202ENST00000539177 WIZO95785 1651 aa28.54■■■□□ 2.16
CCDC144NL-202ENST00000539177 WDR62O43379 1518 aa28.52■■■□□ 2.16
CCDC144NL-202ENST00000539177 CEP164Q9UPV0 1460 aa28.38■■■□□ 2.13
CCDC144NL-202ENST00000539177 FANCD2Q9BXW9 1451 aa28.3■■■□□ 2.12
CCDC144NL-202ENST00000539177 CFTRP13569 1480 aa28.16■■■□□ 2.1
CCDC144NL-202ENST00000539177 URB2Q14146 1524 aaKnown RBP28.12■■■□□ 2.09
CCDC144NL-202ENST00000539177 OSCARQ8IYS5 282 aa28.1■■■□□ 2.09
CCDC144NL-202ENST00000539177 TOP2AP11388 1531 aaKnown RBP28.08■■■□□ 2.08
CCDC144NL-202ENST00000539177 PRDM2Q13029 1718 aa28.06■■■□□ 2.08
CCDC144NL-202ENST00000539177 RSF1Q96T23 1441 aaPredicted RBP28.01■■■□□ 2.08
CCDC144NL-202ENST00000539177 RIMBP3CA6NJZ7 1639 aa27.95■■■□□ 2.06
CCDC144NL-202ENST00000539177 RIMBP3BA6NNM3 1639 aa27.95■■■□□ 2.06
CCDC144NL-202ENST00000539177 RIMBP3Q9UFD9 1639 aa27.95■■■□□ 2.06
CCDC144NL-202ENST00000539177 ZNF608Q9ULD9 1512 aaPredicted RBP27.85■■■□□ 2.05
CCDC144NL-202ENST00000539177 IFT140Q96RY7 1462 aa27.79■■■□□ 2.04
CCDC144NL-202ENST00000539177 ARHGEF11O15085 1522 aa27.75■■■□□ 2.03
CCDC144NL-202ENST00000539177 EIF4G3O43432 1585 aaKnown RBP27.73■■■□□ 2.03
CCDC144NL-202ENST00000539177 TOPBP1Q92547 1522 aa27.73■■■□□ 2.03
CCDC144NL-202ENST00000539177 CCDC88BA6NC98 1476 aa27.73■■■□□ 2.03
CCDC144NL-202ENST00000539177 CHD1O14646 1710 aa27.67■■■□□ 2.02
CCDC144NL-202ENST00000539177 DNMBPQ6XZF7 1577 aa27.6■■■□□ 2.01
CCDC144NL-202ENST00000539177 ABCC8Q09428 1581 aa27.56■■■□□ 2
CCDC144NL-202ENST00000539177 TARBP1Q13395 1621 aaKnown RBP27.54■■■□□ 2
CCDC144NL-202ENST00000539177 CYB5RLQ6IPT4 315 aa27.52■■■□□ 2
CCDC144NL-202ENST00000539177 AQRO60306 1485 aaKnown RBP eCLIP27.51■■■□□ 22e-7■■■■■ 31
CCDC144NL-202ENST00000539177 ARAP1Q96P48 1450 aa27.45■■□□□ 1.99
CCDC144NL-202ENST00000539177 FBLN2P98095 1184 aa27.42■■□□□ 1.98
CCDC144NL-202ENST00000539177 POLA1P09884 1462 aaPredicted RBP27.41■■□□□ 1.98
CCDC144NL-202ENST00000539177 TRHP20396 242 aaPredicted RBP27.38■■□□□ 1.97
CCDC144NL-202ENST00000539177 RAD54L2Q9Y4B4 1467 aa27.34■■□□□ 1.97
CCDC144NL-202ENST00000539177 TDRD9Q8NDG6 1382 aaKnown RBP27.26■■□□□ 1.95
CCDC144NL-202ENST00000539177 SNAPC4Q5SXM2 1469 aa27.25■■□□□ 1.95
CCDC144NL-202ENST00000539177 SOGA1O94964 1423 aa27.24■■□□□ 1.95
CCDC144NL-202ENST00000539177 CLASP1Q7Z460 1538 aa27.22■■□□□ 1.95
CCDC144NL-202ENST00000539177 FGD5Q6ZNL6 1462 aa27.2■■□□□ 1.95
CCDC144NL-202ENST00000539177 WDR97A6NE52 1622 aa27.18■■□□□ 1.94
CCDC144NL-202ENST00000539177 SYNJ1O43426 1573 aa27.18■■□□□ 1.94
CCDC144NL-202ENST00000539177 CUX1P39880 1505 aa27.11■■□□□ 1.93
CCDC144NL-202ENST00000539177 MAGI1Q96QZ7 1491 aaPredicted RBP27.11■■□□□ 1.93
CCDC144NL-202ENST00000539177 CHMP7Q8WUX9 453 aaPredicted RBP27.1■■□□□ 1.93
CCDC144NL-202ENST00000539177 PBRM1Q86U86 1689 aa27.1■■□□□ 1.93
CCDC144NL-202ENST00000539177 GRIN2BQ13224 1484 aa27.06■■□□□ 1.92
CCDC144NL-202ENST00000539177 SYNJ2O15056 1496 aa27.03■■□□□ 1.92
CCDC144NL-202ENST00000539177 GAPVD1Q14C86 1478 aa26.93■■□□□ 1.9
CCDC144NL-202ENST00000539177 ABCA5Q8WWZ7 1642 aa26.9■■□□□ 1.9
CCDC144NL-202ENST00000539177 AEBP2Q6ZN18 517 aaPredicted RBP26.88■■□□□ 1.89
CCDC144NL-202ENST00000539177 ABCA10Q8WWZ4 1543 aa26.82■■□□□ 1.88
CCDC144NL-202ENST00000539177 ERCC6L2Q5T890 1561 aa26.82■■□□□ 1.88
CCDC144NL-202ENST00000539177 GRIN2AQ12879 1464 aa26.74■■□□□ 1.87
CCDC144NL-202ENST00000539177 ADAMTS12P58397 1594 aa26.74■■□□□ 1.87
CCDC144NL-202ENST00000539177 CEP170Q5SW79 1584 aa26.72■■□□□ 1.87
CCDC144NL-202ENST00000539177 SHROOM2Q13796 1616 aa26.64■■□□□ 1.85
CCDC144NL-202ENST00000539177 NUP160Q12769 1436 aa26.63■■□□□ 1.85
CCDC144NL-202ENST00000539177 BIVM-ERCC5R4GMW8 1640 aa26.61■■□□□ 1.85
CCDC144NL-202ENST00000539177 KIF13AQ9H1H9 1805 aa26.61■■□□□ 1.85
CCDC144NL-202ENST00000539177 WRNQ14191 1432 aaPredicted RBP eCLIP26.6■■□□□ 1.85
CCDC144NL-202ENST00000539177 TOP2BQ02880 1626 aa26.57■■□□□ 1.84
CCDC144NL-202ENST00000539177 FHAD1B1AJZ9 1412 aa26.54■■□□□ 1.84
CCDC144NL-202ENST00000539177 SUPT5HO00267 1087 aaKnown RBP26.52■■□□□ 1.84
CCDC144NL-202ENST00000539177 ERICH3Q5RHP9 1530 aa26.49■■□□□ 1.83
CCDC144NL-202ENST00000539177 PRG4Q92954 1404 aaPredicted RBP26.43■■□□□ 1.82
CCDC144NL-202ENST00000539177 RUSC2Q8N2Y8 1516 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms