Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NANOGP1Q8N7R0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NANOGP1Q8N7R0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.16■■□□□ 1.3
NANOGP1Q8N7R0 WASH5P-204ENST00000632292 975 ntBASIC23.16■■□□□ 1.3
NANOGP1Q8N7R0 AC010864.1-201ENST00000609407 1511 ntBASIC23.16■■□□□ 1.3
NANOGP1Q8N7R0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NANOGP1Q8N7R0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.16■■□□□ 1.3
NANOGP1Q8N7R0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
NANOGP1Q8N7R0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.15■■□□□ 1.3
NANOGP1Q8N7R0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
NANOGP1Q8N7R0 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NANOGP1Q8N7R0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NANOGP1Q8N7R0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
NANOGP1Q8N7R0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NANOGP1Q8N7R0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
NANOGP1Q8N7R0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.14■■□□□ 1.3
NANOGP1Q8N7R0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.14■■□□□ 1.3
NANOGP1Q8N7R0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
NANOGP1Q8N7R0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.14■■□□□ 1.29
NANOGP1Q8N7R0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NANOGP1Q8N7R0 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC23.13■■□□□ 1.29
NANOGP1Q8N7R0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.13■■□□□ 1.29
NANOGP1Q8N7R0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NANOGP1Q8N7R0 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NANOGP1Q8N7R0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
NANOGP1Q8N7R0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.12■■□□□ 1.29
NANOGP1Q8N7R0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
NANOGP1Q8N7R0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NANOGP1Q8N7R0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
NANOGP1Q8N7R0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
NANOGP1Q8N7R0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.1■■□□□ 1.29
NANOGP1Q8N7R0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
NANOGP1Q8N7R0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NANOGP1Q8N7R0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
NANOGP1Q8N7R0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.08■■□□□ 1.29
NANOGP1Q8N7R0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NANOGP1Q8N7R0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NANOGP1Q8N7R0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
NANOGP1Q8N7R0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NANOGP1Q8N7R0 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NANOGP1Q8N7R0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.06■■□□□ 1.28
NANOGP1Q8N7R0 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NANOGP1Q8N7R0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
NANOGP1Q8N7R0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
NANOGP1Q8N7R0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NANOGP1Q8N7R0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
NANOGP1Q8N7R0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
NANOGP1Q8N7R0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
NANOGP1Q8N7R0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NANOGP1Q8N7R0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
NANOGP1Q8N7R0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NANOGP1Q8N7R0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NANOGP1Q8N7R0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.03■■□□□ 1.28
NANOGP1Q8N7R0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NANOGP1Q8N7R0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NANOGP1Q8N7R0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
NANOGP1Q8N7R0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
NANOGP1Q8N7R0 AP004833.2-201ENST00000532228 1454 ntBASIC23.02■■□□□ 1.28
NANOGP1Q8N7R0 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NANOGP1Q8N7R0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NANOGP1Q8N7R0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NANOGP1Q8N7R0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
NANOGP1Q8N7R0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.01■■□□□ 1.27
NANOGP1Q8N7R0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23■■□□□ 1.27
NANOGP1Q8N7R0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23■■□□□ 1.27
NANOGP1Q8N7R0 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC22.99■■□□□ 1.27
NANOGP1Q8N7R0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NANOGP1Q8N7R0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NANOGP1Q8N7R0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.99■■□□□ 1.27
NANOGP1Q8N7R0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NANOGP1Q8N7R0 LINC01003-201ENST00000564834 1764 ntBASIC22.99■■□□□ 1.27
NANOGP1Q8N7R0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.98■■□□□ 1.27
NANOGP1Q8N7R0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NANOGP1Q8N7R0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.98■■□□□ 1.27
NANOGP1Q8N7R0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
NANOGP1Q8N7R0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.97■■□□□ 1.27
NANOGP1Q8N7R0 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC22.97■■□□□ 1.27
NANOGP1Q8N7R0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.97■■□□□ 1.27
NANOGP1Q8N7R0 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
NANOGP1Q8N7R0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.96■■□□□ 1.27
NANOGP1Q8N7R0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
NANOGP1Q8N7R0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
NANOGP1Q8N7R0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
NANOGP1Q8N7R0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.96■■□□□ 1.27
NANOGP1Q8N7R0 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NANOGP1Q8N7R0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
NANOGP1Q8N7R0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
NANOGP1Q8N7R0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
NANOGP1Q8N7R0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.95■■□□□ 1.26
NANOGP1Q8N7R0 AL449106.1-201ENST00000608517 1980 ntBASIC22.94■■□□□ 1.26
NANOGP1Q8N7R0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.94■■□□□ 1.26
NANOGP1Q8N7R0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC22.94■■□□□ 1.26
NANOGP1Q8N7R0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.94■■□□□ 1.26
NANOGP1Q8N7R0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
NANOGP1Q8N7R0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.93■■□□□ 1.26
NANOGP1Q8N7R0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
NANOGP1Q8N7R0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC22.92■■□□□ 1.26
NANOGP1Q8N7R0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NANOGP1Q8N7R0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.26
NANOGP1Q8N7R0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms