Protein–RNA interactions for Protein: Q8N145

LGI3, Leucine-rich repeat LGI family member 3, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI3Q8N145 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.31■■□□□ 1
LGI3Q8N145 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
LGI3Q8N145 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.31■■□□□ 1
LGI3Q8N145 BX255925.1-201ENST00000566954 1854 ntBASIC21.3■■□□□ 1
LGI3Q8N145 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
LGI3Q8N145 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
LGI3Q8N145 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LGI3Q8N145 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.3■■□□□ 1
LGI3Q8N145 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LGI3Q8N145 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LGI3Q8N145 AC010864.1-201ENST00000609407 1511 ntBASIC21.29■■□□□ 1
LGI3Q8N145 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LGI3Q8N145 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LGI3Q8N145 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
LGI3Q8N145 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
LGI3Q8N145 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
LGI3Q8N145 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.28■■□□□ 1
LGI3Q8N145 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.28■■□□□ 1
LGI3Q8N145 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.28■■□□□ 1
LGI3Q8N145 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.27■■□□□ 1
LGI3Q8N145 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.27■■□□□ 1
LGI3Q8N145 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.27■■□□□ 1
LGI3Q8N145 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LGI3Q8N145 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.27■■□□□ 1
LGI3Q8N145 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.27■■□□□ 1
LGI3Q8N145 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
LGI3Q8N145 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.27■■□□□ 1
LGI3Q8N145 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LGI3Q8N145 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LGI3Q8N145 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LGI3Q8N145 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LGI3Q8N145 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LGI3Q8N145 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.25■□□□□ 0.99
LGI3Q8N145 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
LGI3Q8N145 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LGI3Q8N145 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
LGI3Q8N145 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.24■□□□□ 0.99
LGI3Q8N145 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.23■□□□□ 0.99
LGI3Q8N145 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LGI3Q8N145 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LGI3Q8N145 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.23■□□□□ 0.99
LGI3Q8N145 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
LGI3Q8N145 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LGI3Q8N145 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LGI3Q8N145 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.22■□□□□ 0.99
LGI3Q8N145 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LGI3Q8N145 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
LGI3Q8N145 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.21■□□□□ 0.99
LGI3Q8N145 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LGI3Q8N145 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.2■□□□□ 0.98
LGI3Q8N145 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC21.2■□□□□ 0.98
LGI3Q8N145 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LGI3Q8N145 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.2■□□□□ 0.98
LGI3Q8N145 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LGI3Q8N145 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LGI3Q8N145 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LGI3Q8N145 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LGI3Q8N145 AP004833.2-201ENST00000532228 1454 ntBASIC21.18■□□□□ 0.98
LGI3Q8N145 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LGI3Q8N145 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LGI3Q8N145 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
LGI3Q8N145 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LGI3Q8N145 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LGI3Q8N145 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LGI3Q8N145 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LGI3Q8N145 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LGI3Q8N145 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.16■□□□□ 0.98
LGI3Q8N145 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
LGI3Q8N145 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.16■□□□□ 0.98
LGI3Q8N145 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LGI3Q8N145 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LGI3Q8N145 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LGI3Q8N145 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
LGI3Q8N145 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LGI3Q8N145 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
LGI3Q8N145 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
LGI3Q8N145 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.14■□□□□ 0.98
LGI3Q8N145 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LGI3Q8N145 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
LGI3Q8N145 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.13■□□□□ 0.97
LGI3Q8N145 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LGI3Q8N145 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LGI3Q8N145 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LGI3Q8N145 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.12■□□□□ 0.97
LGI3Q8N145 AC135731.1-201ENST00000569415 2548 ntBASIC21.12■□□□□ 0.97
LGI3Q8N145 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LGI3Q8N145 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
LGI3Q8N145 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LGI3Q8N145 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LGI3Q8N145 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.1■□□□□ 0.97
LGI3Q8N145 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LGI3Q8N145 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
LGI3Q8N145 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.09■□□□□ 0.97
LGI3Q8N145 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
LGI3Q8N145 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.09■□□□□ 0.97
LGI3Q8N145 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
LGI3Q8N145 LINC01003-201ENST00000564834 1764 ntBASIC21.09■□□□□ 0.97
LGI3Q8N145 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
LGI3Q8N145 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LGI3Q8N145 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms