Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 FAM213B-203ENST00000378427 2689 ntAPPRIS ALT2 TSL 222.53■■□□□ 1.22e-6■■■■□ 24.3
NKRFO15226 FKBP2-206ENST00000541388 705 ntTSL 522.22■■□□□ 1.152e-6■■■■□ 24.3
NKRFO15226 FAM213B-212ENST00000484099 2577 ntTSL 222.18■■□□□ 1.142e-6■■■■□ 24.3
NKRFO15226 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.092e-6■■■■□ 24.3
NKRFO15226 CTDSP2-207ENST00000551594 900 ntTSL 321.35■■□□□ 1.012e-6■■■■□ 24.3
NKRFO15226 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.932e-6■■■■□ 24.3
NKRFO15226 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.92e-6■■■■□ 24.3
NKRFO15226 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.5■□□□□ 0.872e-6■■■■□ 24.3
NKRFO15226 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.862e-6■■■■□ 24.3
NKRFO15226 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.582e-6■■■■□ 24.3
NKRFO15226 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.562e-6■■■■□ 24.3
NKRFO15226 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.541e-11■■■■□ 24.3
NKRFO15226 FAM213B-209ENST00000476686 2506 ntTSL 1 (best)18.26■□□□□ 0.512e-6■■■■□ 24.3
NKRFO15226 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.482e-6■■■■□ 24.3
NKRFO15226 FAT1-208ENST00000509647 1852 ntTSL 1 (best)17.75■□□□□ 0.431e-11■■■■□ 24.3
NKRFO15226 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.412e-6■■■■□ 24.3
NKRFO15226 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.392e-6■■■■□ 24.3
NKRFO15226 PTK7-216ENST00000489707 1935 ntTSL 1 (best)17.07■□□□□ 0.322e-6■■■■□ 24.3
NKRFO15226 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.212e-6■■■■□ 24.3
NKRFO15226 HMGCR-208ENST00000509431 421 ntTSL 216.33■□□□□ 0.22e-6■■■■□ 24.3
NKRFO15226 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.32■□□□□ 0.22e-6■■■■□ 24.3
NKRFO15226 PEMT-205ENST00000421096 662 ntTSL 316.12■□□□□ 0.172e-6■■■■□ 24.3
NKRFO15226 PTK7-208ENST00000470019 4016 ntTSL 515.9■□□□□ 0.142e-6■■■■□ 24.3
NKRFO15226 PTK7-201ENST00000230418 3958 ntTSL 1 (best)15.62■□□□□ 0.092e-6■■■■□ 24.3
NKRFO15226 AZIN1-207ENST00000520402 660 ntTSL 415.45■□□□□ 0.061e-11■■■■□ 24.3
NKRFO15226 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC15.28■□□□□ 0.042e-6■■■■□ 24.3
NKRFO15226 PTK7-215ENST00000487673 5282 ntTSL 215.2■□□□□ 0.022e-6■■■■□ 24.3
NKRFO15226 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 02e-6■■■■□ 24.3
NKRFO15226 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC15.04■□□□□ -02e-6■■■■□ 24.3
NKRFO15226 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.97□□□□□ -0.012e-6■■■■□ 24.3
NKRFO15226 PTK7-214ENST00000481946 807 ntTSL 314.86□□□□□ -0.032e-6■■■■□ 24.3
NKRFO15226 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC14.39□□□□□ -0.112e-6■■■■□ 24.3
NKRFO15226 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.292e-6■■■■□ 24.3
NKRFO15226 PTK7-209ENST00000470471 854 ntTSL 212.88□□□□□ -0.352e-6■■■■□ 24.3
NKRFO15226 PTK7-213ENST00000481273 3436 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.462e-6■■■■□ 24.3
NKRFO15226 MAT2A-203ENST00000465151 583 ntTSL 211.63□□□□□ -0.553e-22■■■■□ 24.3
NKRFO15226 AZIN1-203ENST00000517581 576 ntTSL 410.95□□□□□ -0.661e-11■■■■□ 24.3
NKRFO15226 XPR1-202ENST00000367590 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.672e-6■■■■□ 24.3
NKRFO15226 HMGCR-201ENST00000287936 4585 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.692e-6■■■■□ 24.3
NKRFO15226 MAT2A-201ENST00000306434 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.713e-22■■■■□ 24.3
NKRFO15226 AZIN1-206ENST00000518940 574 ntTSL 310.45□□□□□ -0.741e-11■■■■□ 24.3
NKRFO15226 AZIN1-202ENST00000347770 2857 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.781e-11■■■■□ 24.3
NKRFO15226 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.891e-11■■■■□ 24.3
NKRFO15226 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC9.19□□□□□ -0.942e-6■■■■□ 24.3
NKRFO15226 AZIN1-204ENST00000518353 773 ntTSL 58.26□□□□□ -1.091e-11■■■■□ 24.3
NKRFO15226 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC8.25□□□□□ -1.091e-11■■■■□ 24.3
NKRFO15226 MAT2A-204ENST00000469221 691 ntTSL 27.94□□□□□ -1.143e-22■■■■□ 24.3
NKRFO15226 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.142e-6■■■■□ 24.3
NKRFO15226 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.523e-6■■■■□ 24.3
NKRFO15226 SSU72-203ENST00000378725 619 ntTSL 221.4■■□□□ 1.023e-6■■■■□ 24.3
NKRFO15226 SSU72-202ENST00000359060 4176 ntTSL 2 BASIC12.17□□□□□ -0.463e-6■■■■□ 24.3
NKRFO15226 HDAC11-207ENST00000405478 799 ntTSL 531.14■■■□□ 2.583e-7■■■■□ 24.1
NKRFO15226 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.483e-7■■■■□ 24.1
NKRFO15226 TCEA2-201ENST00000339217 953 ntTSL 330.45■■■□□ 2.473e-7■■■■□ 24.1
NKRFO15226 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.38■■■□□ 2.453e-7■■■■□ 24.1
NKRFO15226 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC29.66■■■□□ 2.343e-7■■■■□ 24.1
NKRFO15226 TCEA2-216ENST00000487164 1060 ntTSL 1 (best)28.15■■■□□ 2.13e-7■■■■□ 24.1
NKRFO15226 KMT5C-202ENST00000402499 888 ntTSL 226.85■■□□□ 1.893e-7■■■■□ 24.1
NKRFO15226 NECAB3-212ENST00000485976 1016 ntTSL 526.11■■□□□ 1.773e-7■■■■□ 24.1
NKRFO15226 NECAB3-207ENST00000478237 827 ntTSL 226.11■■□□□ 1.773e-7■■■■□ 24.1
NKRFO15226 KMT5C-208ENST00000498738 713 ntTSL 525.68■■□□□ 1.73e-7■■■■□ 24.1
NKRFO15226 SDCBP-209ENST00000522243 556 ntTSL 524.07■■□□□ 1.443e-7■■■■□ 24.1
NKRFO15226 HDAC11-217ENST00000475818 1271 ntTSL 323.99■■□□□ 1.433e-7■■■■□ 24.1
NKRFO15226 NECAB3-209ENST00000483813 1277 ntTSL 523.2■■□□□ 1.33e-7■■■■□ 24.1
NKRFO15226 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.97■■□□□ 1.273e-7■■■■□ 24.1
NKRFO15226 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC22.81■■□□□ 1.243e-7■■■■□ 24.1
NKRFO15226 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.78■■□□□ 1.243e-7■■■■□ 24.1
NKRFO15226 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.223e-7■■■■□ 24.1
NKRFO15226 HDAC11-212ENST00000434848 520 ntTSL 422.61■■□□□ 1.213e-7■■■■□ 24.1
NKRFO15226 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC22.61■■□□□ 1.213e-7■■■■□ 24.1
NKRFO15226 HDAC11-218ENST00000487585 610 ntTSL 422.61■■□□□ 1.213e-7■■■■□ 24.1
NKRFO15226 HDAC11-216ENST00000458642 574 ntTSL 521.74■■□□□ 1.073e-7■■■■□ 24.1
NKRFO15226 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.023e-7■■■■□ 24.1
NKRFO15226 KMT5C-210ENST00000589338 1601 ntTSL 1 (best)21.41■■□□□ 1.023e-7■■■■□ 24.1
NKRFO15226 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.993e-7■■■■□ 24.1
NKRFO15226 HDAC11-215ENST00000455904 731 ntTSL 221.01■□□□□ 0.953e-7■■■■□ 24.1
NKRFO15226 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.01■□□□□ 0.953e-7■■■■□ 24.1
NKRFO15226 NECAB3-218ENST00000606525 2010 ntTSL 220.8■□□□□ 0.923e-7■■■■□ 24.1
NKRFO15226 TCEA2-205ENST00000415602 726 ntTSL 320.79■□□□□ 0.923e-7■■■■□ 24.1
NKRFO15226 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.93e-7■■■■□ 24.1
NKRFO15226 NECAB3-216ENST00000498353 597 ntTSL 320.44■□□□□ 0.863e-7■■■■□ 24.1
NKRFO15226 HDAC11-220ENST00000498532 565 ntTSL 420.29■□□□□ 0.843e-7■■■■□ 24.1
NKRFO15226 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.86■□□□□ 0.773e-7■■■■□ 24.1
NKRFO15226 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.713e-7■■■■□ 24.1
NKRFO15226 NECAB3-204ENST00000463246 766 ntTSL 319.24■□□□□ 0.673e-7■■■■□ 24.1
NKRFO15226 KMT5C-205ENST00000464185 2235 ntTSL 1 (best)19.24■□□□□ 0.673e-7■■■■□ 24.1
NKRFO15226 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.663e-7■■■■□ 24.1
NKRFO15226 KMT5C-203ENST00000445196 2077 ntTSL 518.91■□□□□ 0.623e-7■■■■□ 24.1
NKRFO15226 SMIM1-202ENST00000452264 447 ntTSL 218.88■□□□□ 0.613e-7■■■■□ 24.1
NKRFO15226 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.45■□□□□ 0.543e-7■■■■□ 24.1
NKRFO15226 TCEA2-206ENST00000440819 1083 ntTSL 517.92■□□□□ 0.463e-7■■■■□ 24.1
NKRFO15226 HDAC11-210ENST00000425430 1021 ntTSL 217.79■□□□□ 0.443e-7■■■■□ 24.1
NKRFO15226 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.333e-7■■■■□ 24.1
NKRFO15226 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.283e-7■■■■□ 24.1
NKRFO15226 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.193e-7■■■■□ 24.1
NKRFO15226 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.05■□□□□ 0.166e-7■■■■□ 24.1
NKRFO15226 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.093e-7■■■■□ 24.1
NKRFO15226 TCEA2-211ENST00000470559 296 ntTSL 515.36■□□□□ 0.053e-7■■■■□ 24.1
NKRFO15226 FTX-211ENST00000603672 1077 ntTSL 515.05■□□□□ -06e-7■■■■□ 24.1
NKRFO15226 HDAC11-219ENST00000495099 198 ntTSL 514.04□□□□□ -0.163e-7■■■■□ 24.1
Retrieved 100 of 9,198 protein–RNA pairs in 385 ms