RNA–Protein interactions for RNA: ENST00000378427.5

FAM213B-203, Transcript of Prostamide/prostaglandin F synthase, humanhuman

APPRIS ALT2 TSL 2

Gene FAM213B, Length 2,689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM213B-203ENST00000378427 NISCHQ9Y2I1 1504 aa43.13■■■■■ 4.49
FAM213B-203ENST00000378427 CCDC180Q9P1Z9 1646 aa36.92■■■■□ 3.5
FAM213B-203ENST00000378427 ZCCHC6Q5VYS8 1495 aaKnown RBP36.4■■■■□ 3.42
FAM213B-203ENST00000378427 SHROOM4Q9ULL8 1493 aa36.38■■■■□ 3.41
FAM213B-203ENST00000378427 DCAF8L2P0C7V8 631 aa35.83■■■■□ 3.33
FAM213B-203ENST00000378427 SUPT5HO00267 1087 aaKnown RBP35.42■■■■□ 3.26
FAM213B-203ENST00000378427 DCAF1Q9Y4B6 1507 aa35.39■■■■□ 3.26
FAM213B-203ENST00000378427 ABCC9O60706 1549 aa34.59■■■■□ 3.13
FAM213B-203ENST00000378427 MYO15BQ96JP2 1530 aa34.55■■■■□ 3.12
FAM213B-203ENST00000378427 SCRIBQ14160 1630 aa34.52■■■■□ 3.12
FAM213B-203ENST00000378427 NACADO15069 1562 aa34.22■■■■□ 3.07
FAM213B-203ENST00000378427 CHIC1Q5VXU3 224 aa34.21■■■■□ 3.07
FAM213B-203ENST00000378427 RSF1Q96T23 1441 aaPredicted RBP33.93■■■■□ 3.02
FAM213B-203ENST00000378427 RB1CC1Q8TDY2 1594 aa33.77■■■■□ 3
FAM213B-203ENST00000378427 CECR2Q9BXF3 1484 aa33.68■■■□□ 2.98
FAM213B-203ENST00000378427 MROH2BQ7Z745 1585 aa33.51■■■□□ 2.96
FAM213B-203ENST00000378427 WIZO95785 1651 aa33.31■■■□□ 2.92
FAM213B-203ENST00000378427 UNC13AQ9UPW8 1703 aa33.3■■■□□ 2.92
FAM213B-203ENST00000378427 LOC105371045A0A1W2PR82 267 aa33.17■■■□□ 2.9
FAM213B-203ENST00000378427 BAZ1AQ9NRL2 1556 aaPredicted RBP33.16■■■□□ 2.9
FAM213B-203ENST00000378427 TRIM41Q8WV44 630 aa33.03■■■□□ 2.88
FAM213B-203ENST00000378427 PABPN1Q86U42 306 aaKnown RBP eCLIP32.96■■■□□ 2.87
FAM213B-203ENST00000378427 SMARCA4P51532 1647 aa32.96■■■□□ 2.87
FAM213B-203ENST00000378427 BICRAQ9NZM4 1560 aa32.9■■■□□ 2.86
FAM213B-203ENST00000378427 TOP2AP11388 1531 aaKnown RBP32.78■■■□□ 2.84
FAM213B-203ENST00000378427 FAM9AQ8IZU1 332 aaPredicted RBP32.74■■■□□ 2.83
FAM213B-203ENST00000378427 EIF4G1Q04637 1599 aaKnown RBP32.67■■■□□ 2.82
FAM213B-203ENST00000378427 PCGF6Q9BYE7 350 aa32.63■■■□□ 2.81
FAM213B-203ENST00000378427 CCDC88BA6NC98 1476 aa32.61■■■□□ 2.81
FAM213B-203ENST00000378427 SMARCA2P51531 1590 aa32.59■■■□□ 2.81
FAM213B-203ENST00000378427 EHMT2Q96KQ7 1210 aa32.48■■■□□ 2.79
FAM213B-203ENST00000378427 ABCC8Q09428 1581 aa32.39■■■□□ 2.78
FAM213B-203ENST00000378427 PEG3Q9GZU2 1588 aa32.35■■■□□ 2.77
FAM213B-203ENST00000378427 HRCP23327 699 aa32.27■■■□□ 2.76
FAM213B-203ENST00000378427 ATAD2BQ9ULI0 1458 aa32.22■■■□□ 2.75
FAM213B-203ENST00000378427 TRIM26Q12899 539 aaPredicted RBP32.11■■■□□ 2.73
FAM213B-203ENST00000378427 BAZ1BQ9UIG0 1483 aaKnown RBP32.1■■■□□ 2.73
FAM213B-203ENST00000378427 SOGA1O94964 1423 aa31.98■■■□□ 2.71
FAM213B-203ENST00000378427 WRNQ14191 1432 aaPredicted RBP eCLIP31.89■■■□□ 2.7
FAM213B-203ENST00000378427 RUSC2Q8N2Y8 1516 aa31.85■■■□□ 2.69
FAM213B-203ENST00000378427 SYNJ1O43426 1573 aa31.78■■■□□ 2.68
FAM213B-203ENST00000378427 PPARGC1BQ86YN6 1023 aaKnown RBP31.72■■■□□ 2.67
FAM213B-203ENST00000378427 CSRNP3Q8WYN3 585 aa31.7■■■□□ 2.67
FAM213B-203ENST00000378427 EEA1Q15075 1411 aa31.69■■■□□ 2.66
FAM213B-203ENST00000378427 NCAPD3P42695 1498 aa31.67■■■□□ 2.66
FAM213B-203ENST00000378427 HMGXB3Q12766 1538 aa31.64■■■□□ 2.66
FAM213B-203ENST00000378427 CEP162Q5TB80 1403 aa31.59■■■□□ 2.65
FAM213B-203ENST00000378427 TNIKQ9UKE5 1360 aa31.54■■■□□ 2.64
FAM213B-203ENST00000378427 UBTFP17480 764 aaKnown RBP31.53■■■□□ 2.64
FAM213B-203ENST00000378427 GOLGA3Q08378 1498 aa31.48■■■□□ 2.63
FAM213B-203ENST00000378427 TOP2BQ02880 1626 aa31.42■■■□□ 2.62
FAM213B-203ENST00000378427 CEP164Q9UPV0 1460 aa31.35■■■□□ 2.61
FAM213B-203ENST00000378427 KIF21BO75037 1637 aa31.32■■■□□ 2.6
FAM213B-203ENST00000378427 BIVM-ERCC5R4GMW8 1640 aa31.31■■■□□ 2.6
FAM213B-203ENST00000378427 TTBK1Q5TCY1 1321 aaPredicted RBP31.31■■■□□ 2.6
FAM213B-203ENST00000378427 CFTRP13569 1480 aa31.29■■■□□ 2.6
FAM213B-203ENST00000378427 CUX1P39880 1505 aa31.23■■■□□ 2.59
FAM213B-203ENST00000378427 RAPGEF2Q9Y4G8 1499 aa31.23■■■□□ 2.59
FAM213B-203ENST00000378427 CC2D2AQ9P2K1 1620 aa31.16■■■□□ 2.58
FAM213B-203ENST00000378427 ZEB1P37275 1124 aaPredicted RBP31.12■■■□□ 2.57
FAM213B-203ENST00000378427 CLIP1P30622 1438 aa31.1■■■□□ 2.57
FAM213B-203ENST00000378427 RANGAP1P46060 587 aaPredicted RBP31.05■■■□□ 2.56
FAM213B-203ENST00000378427 PRDM2Q13029 1718 aa31.02■■■□□ 2.56
FAM213B-203ENST00000378427 CADPSQ9ULU8 1353 aa31.02■■■□□ 2.56
FAM213B-203ENST00000378427 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.97■■■□□ 2.55
FAM213B-203ENST00000378427 PRXQ9BXM0 1461 aa30.97■■■□□ 2.55
FAM213B-203ENST00000378427 KIF27Q86VH2 1401 aa30.93■■■□□ 2.54
FAM213B-203ENST00000378427 ERICH3Q5RHP9 1530 aa30.9■■■□□ 2.54
FAM213B-203ENST00000378427 VPS8Q8N3P4 1428 aa30.9■■■□□ 2.54
FAM213B-203ENST00000378427 CCER1Q8TC90 406 aaPredicted RBP30.82■■■□□ 2.52
FAM213B-203ENST00000378427 CUX2O14529 1486 aa30.76■■■□□ 2.51
FAM213B-203ENST00000378427 FGD5Q6ZNL6 1462 aa30.75■■■□□ 2.51
FAM213B-203ENST00000378427 FANCD2Q9BXW9 1451 aa30.74■■■□□ 2.51
FAM213B-203ENST00000378427 NESP48681 1621 aa30.7■■■□□ 2.5
FAM213B-203ENST00000378427 ARAP1Q96P48 1450 aa30.68■■■□□ 2.5
FAM213B-203ENST00000378427 APLP2Q06481 763 aa30.68■■■□□ 2.5
FAM213B-203ENST00000378427 IGF1RP08069 1367 aa30.65■■■□□ 2.5
FAM213B-203ENST00000378427 HNRNPUL2Q1KMD3 747 aaKnown RBP30.53■■■□□ 2.48
FAM213B-203ENST00000378427 DNAJC5BQ9UF47 199 aa30.52■■■□□ 2.48
FAM213B-203ENST00000378427 DNMBPQ6XZF7 1577 aa30.51■■■□□ 2.48
FAM213B-203ENST00000378427 ARHGAP35Q9NRY4 1499 aa30.5■■■□□ 2.47
FAM213B-203ENST00000378427 CARMIL1Q5VZK9 1371 aa30.5■■■□□ 2.47
FAM213B-203ENST00000378427 RAD54L2Q9Y4B4 1467 aa30.5■■■□□ 2.47
FAM213B-203ENST00000378427 TOPBP1Q92547 1522 aa30.49■■■□□ 2.47
FAM213B-203ENST00000378427 POLA1P09884 1462 aaPredicted RBP30.46■■■□□ 2.47
FAM213B-203ENST00000378427 KANK4Q5T7N3 995 aaPredicted RBP30.43■■■□□ 2.46
FAM213B-203ENST00000378427 LAMC3Q9Y6N6 1575 aa30.4■■■□□ 2.46
FAM213B-203ENST00000378427 ABCA10Q8WWZ4 1543 aa30.37■■■□□ 2.45
FAM213B-203ENST00000378427 URB2Q14146 1524 aaKnown RBP30.33■■■□□ 2.45
FAM213B-203ENST00000378427 PDS5BQ9NTI5 1447 aa30.2■■■□□ 2.43
FAM213B-203ENST00000378427 KIF21AQ7Z4S6 1674 aa30.16■■■□□ 2.42
FAM213B-203ENST00000378427 P3H3Q8IVL6 736 aa30.16■■■□□ 2.42
FAM213B-203ENST00000378427 WDR97A6NE52 1622 aa30.16■■■□□ 2.42
FAM213B-203ENST00000378427 TDRD9Q8NDG6 1382 aaKnown RBP30.14■■■□□ 2.42
FAM213B-203ENST00000378427 CUL7Q14999 1698 aa30.12■■■□□ 2.41
FAM213B-203ENST00000378427 RRBP1Q9P2E9 1410 aaKnown RBP30.1■■■□□ 2.41
FAM213B-203ENST00000378427 TIAM1Q13009 1591 aa30.07■■■□□ 2.4
FAM213B-203ENST00000378427 ABCA5Q8WWZ7 1642 aa30.05■■■□□ 2.4
FAM213B-203ENST00000378427 FHOD3Q2V2M9 1422 aa30.05■■■□□ 2.4
FAM213B-203ENST00000378427 GAPVD1Q14C86 1478 aa30.01■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms