RNA–Protein interactions for RNA: ENST00000444870.6

SMIM1-201, Transcript of small integral membrane protein 1 (Vel blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM1, Length 546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1-201ENST00000444870 NISCHQ9Y2I1 1504 aa48.53■■■■■ 5.36
SMIM1-201ENST00000444870 ABCC9O60706 1549 aa44.23■■■■■ 4.67
SMIM1-201ENST00000444870 CCDC180Q9P1Z9 1646 aa43.55■■■■■ 4.56
SMIM1-201ENST00000444870 DNAJC5BQ9UF47 199 aa41.91■■■■■ 4.3
SMIM1-201ENST00000444870 RB1CC1Q8TDY2 1594 aa41.76■■■■■ 4.28
SMIM1-201ENST00000444870 DCAF8L2P0C7V8 631 aa41.49■■■■■ 4.23
SMIM1-201ENST00000444870 NACADO15069 1562 aa41.36■■■■■ 4.21
SMIM1-201ENST00000444870 PABPN1Q86U42 306 aaKnown RBP eCLIP41.24■■■■■ 4.19
SMIM1-201ENST00000444870 UNC13AQ9UPW8 1703 aa40.7■■■■■ 4.11
SMIM1-201ENST00000444870 MYO15BQ96JP2 1530 aa40.57■■■■■ 4.09
SMIM1-201ENST00000444870 BICRAQ9NZM4 1560 aa40.55■■■■■ 4.08
SMIM1-201ENST00000444870 ZCCHC6Q5VYS8 1495 aaKnown RBP40.1■■■■■ 4.01
SMIM1-201ENST00000444870 DCAF1Q9Y4B6 1507 aa39.94■■■■□ 3.98
SMIM1-201ENST00000444870 SCRIBQ14160 1630 aa39.86■■■■□ 3.97
SMIM1-201ENST00000444870 SHROOM4Q9ULL8 1493 aa39.85■■■■□ 3.97
SMIM1-201ENST00000444870 CECR2Q9BXF3 1484 aa39.84■■■■□ 3.97
SMIM1-201ENST00000444870 CC2D2AQ9P2K1 1620 aa39.81■■■■□ 3.96
SMIM1-201ENST00000444870 EIF4G1Q04637 1599 aaKnown RBP39.62■■■■□ 3.93
SMIM1-201ENST00000444870 DNAJC5Q9H3Z4 198 aa38.71■■■■□ 3.79
SMIM1-201ENST00000444870 NCAPD3P42695 1498 aa38.24■■■■□ 3.71
SMIM1-201ENST00000444870 ERCC6Q03468 1493 aa38.21■■■■□ 3.71
SMIM1-201ENST00000444870 CUX2O14529 1486 aa38.14■■■■□ 3.7
SMIM1-201ENST00000444870 ATAD2BQ9ULI0 1458 aa38.1■■■■□ 3.69
SMIM1-201ENST00000444870 SMARCA2P51531 1590 aa37.92■■■■□ 3.66
SMIM1-201ENST00000444870 SMARCA4P51532 1647 aa37.9■■■■□ 3.66
SMIM1-201ENST00000444870 NESP48681 1621 aa37.87■■■■□ 3.65
SMIM1-201ENST00000444870 HMGXB3Q12766 1538 aa37.84■■■■□ 3.65
SMIM1-201ENST00000444870 BAZ1BQ9UIG0 1483 aaKnown RBP37.73■■■■□ 3.63
SMIM1-201ENST00000444870 BAZ1AQ9NRL2 1556 aaPredicted RBP37.67■■■■□ 3.62
SMIM1-201ENST00000444870 PEG3Q9GZU2 1588 aa37.45■■■■□ 3.59
SMIM1-201ENST00000444870 MROH2BQ7Z745 1585 aa37.43■■■■□ 3.58
SMIM1-201ENST00000444870 THOC2Q8NI27 1593 aaKnown RBP37.39■■■■□ 3.58
SMIM1-201ENST00000444870 LAMC3Q9Y6N6 1575 aa37.38■■■■□ 3.58
SMIM1-201ENST00000444870 PDS5BQ9NTI5 1447 aa37.29■■■■□ 3.56
SMIM1-201ENST00000444870 KIF21AQ7Z4S6 1674 aa37.21■■■■□ 3.55
SMIM1-201ENST00000444870 CADPSQ9ULU8 1353 aa37.13■■■■□ 3.53
SMIM1-201ENST00000444870 TRIM41Q8WV44 630 aa37.01■■■■□ 3.52
SMIM1-201ENST00000444870 MRC2Q9UBG0 1479 aa36.97■■■■□ 3.51
SMIM1-201ENST00000444870 WIZO95785 1651 aa36.93■■■■□ 3.5
SMIM1-201ENST00000444870 WDR62O43379 1518 aa36.82■■■■□ 3.48
SMIM1-201ENST00000444870 CEP164Q9UPV0 1460 aa36.75■■■■□ 3.47
SMIM1-201ENST00000444870 FANCD2Q9BXW9 1451 aa36.7■■■■□ 3.47
SMIM1-201ENST00000444870 CFTRP13569 1480 aa36.56■■■■□ 3.44
SMIM1-201ENST00000444870 RSF1Q96T23 1441 aaPredicted RBP36.53■■■■□ 3.44
SMIM1-201ENST00000444870 OSCARQ8IYS5 282 aa36.51■■■■□ 3.44
SMIM1-201ENST00000444870 TOP2AP11388 1531 aaKnown RBP36.4■■■■□ 3.42
SMIM1-201ENST00000444870 URB2Q14146 1524 aaKnown RBP36.4■■■■□ 3.42
SMIM1-201ENST00000444870 CCDC88BA6NC98 1476 aa36.09■■■■□ 3.37
SMIM1-201ENST00000444870 ZNF608Q9ULD9 1512 aaPredicted RBP36.07■■■■□ 3.36
SMIM1-201ENST00000444870 IFT140Q96RY7 1462 aa36.03■■■■□ 3.36
SMIM1-201ENST00000444870 PRDM2Q13029 1718 aa35.96■■■■□ 3.35
SMIM1-201ENST00000444870 TOPBP1Q92547 1522 aa35.93■■■■□ 3.34
SMIM1-201ENST00000444870 RIMBP3CA6NJZ7 1639 aa35.92■■■■□ 3.34
SMIM1-201ENST00000444870 RIMBP3BA6NNM3 1639 aa35.92■■■■□ 3.34
SMIM1-201ENST00000444870 RIMBP3Q9UFD9 1639 aa35.92■■■■□ 3.34
SMIM1-201ENST00000444870 ARHGEF11O15085 1522 aa35.8■■■■□ 3.32
SMIM1-201ENST00000444870 ABCC8Q09428 1581 aa35.78■■■■□ 3.32
SMIM1-201ENST00000444870 CYB5RLQ6IPT4 315 aa35.76■■■■□ 3.32
SMIM1-201ENST00000444870 AQRO60306 1485 aaKnown RBP eCLIP35.73■■■■□ 3.314e-7■■■■■ 28
SMIM1-201ENST00000444870 EIF4G3O43432 1585 aaKnown RBP35.73■■■■□ 3.31
SMIM1-201ENST00000444870 FBLN2P98095 1184 aa35.73■■■■□ 3.31
SMIM1-201ENST00000444870 DNMBPQ6XZF7 1577 aa35.72■■■■□ 3.31
SMIM1-201ENST00000444870 TARBP1Q13395 1621 aaKnown RBP35.57■■■■□ 3.28
SMIM1-201ENST00000444870 POLA1P09884 1462 aaPredicted RBP35.55■■■■□ 3.28
SMIM1-201ENST00000444870 TRHP20396 242 aaPredicted RBP35.53■■■■□ 3.28
SMIM1-201ENST00000444870 CHD1O14646 1710 aa35.52■■■■□ 3.28
SMIM1-201ENST00000444870 RAD54L2Q9Y4B4 1467 aa35.51■■■■□ 3.28
SMIM1-201ENST00000444870 TDRD9Q8NDG6 1382 aaKnown RBP35.49■■■■□ 3.27
SMIM1-201ENST00000444870 SOGA1O94964 1423 aa35.46■■■■□ 3.27
SMIM1-201ENST00000444870 ARAP1Q96P48 1450 aa35.44■■■■□ 3.26
SMIM1-201ENST00000444870 CHMP7Q8WUX9 453 aaPredicted RBP35.32■■■■□ 3.24
SMIM1-201ENST00000444870 SNAPC4Q5SXM2 1469 aa35.3■■■■□ 3.24
SMIM1-201ENST00000444870 FGD5Q6ZNL6 1462 aa35.29■■■■□ 3.24
SMIM1-201ENST00000444870 CUX1P39880 1505 aa35.17■■■■□ 3.22
SMIM1-201ENST00000444870 GRIN2BQ13224 1484 aa35.13■■■■□ 3.21
SMIM1-201ENST00000444870 CLASP1Q7Z460 1538 aa35.11■■■■□ 3.21
SMIM1-201ENST00000444870 MAGI1Q96QZ7 1491 aaPredicted RBP35.11■■■■□ 3.21
SMIM1-201ENST00000444870 SYNJ1O43426 1573 aa35.09■■■■□ 3.21
SMIM1-201ENST00000444870 WDR97A6NE52 1622 aa35.08■■■■□ 3.21
SMIM1-201ENST00000444870 SYNJ2O15056 1496 aa35.04■■■■□ 3.2
SMIM1-201ENST00000444870 GAPVD1Q14C86 1478 aa34.97■■■■□ 3.19
SMIM1-201ENST00000444870 SUPT5HO00267 1087 aaKnown RBP34.88■■■■□ 3.17
SMIM1-201ENST00000444870 PBRM1Q86U86 1689 aa34.84■■■■□ 3.17
SMIM1-201ENST00000444870 ABCA10Q8WWZ4 1543 aa34.81■■■■□ 3.16
SMIM1-201ENST00000444870 AEBP2Q6ZN18 517 aaPredicted RBP34.77■■■■□ 3.16
SMIM1-201ENST00000444870 ABCA5Q8WWZ7 1642 aa34.73■■■■□ 3.15
SMIM1-201ENST00000444870 WRNQ14191 1432 aaPredicted RBP eCLIP34.67■■■■□ 3.14
SMIM1-201ENST00000444870 GRIN2AQ12879 1464 aa34.66■■■■□ 3.14
SMIM1-201ENST00000444870 ERCC6L2Q5T890 1561 aa34.64■■■■□ 3.14
SMIM1-201ENST00000444870 CEP170Q5SW79 1584 aa34.54■■■■□ 3.12
SMIM1-201ENST00000444870 NUP160Q12769 1436 aa34.54■■■■□ 3.12
SMIM1-201ENST00000444870 ADAMTS12P58397 1594 aa34.53■■■■□ 3.12
SMIM1-201ENST00000444870 FHAD1B1AJZ9 1412 aa34.5■■■■□ 3.11
SMIM1-201ENST00000444870 TOP2BQ02880 1626 aa34.44■■■■□ 3.1
SMIM1-201ENST00000444870 BIVM-ERCC5R4GMW8 1640 aa34.4■■■■□ 3.1
SMIM1-201ENST00000444870 PRG4Q92954 1404 aaPredicted RBP34.34■■■■□ 3.09
SMIM1-201ENST00000444870 ERICH3Q5RHP9 1530 aa34.34■■■■□ 3.09
SMIM1-201ENST00000444870 SHROOM2Q13796 1616 aa34.33■■■■□ 3.09
SMIM1-201ENST00000444870 JPH4Q96JJ6 628 aa34.33■■■■□ 3.09
SMIM1-201ENST00000444870 NPM1P06748 294 aaKnown RBP eCLIP34.17■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 246.3 ms