RNA–Protein interactions for RNA: ENST00000522202.5

HDAC11-221, Transcript of histone deacetylase 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC11, Length 1,559 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-221ENST00000522202 NISCHQ9Y2I1 1504 aa42.67■■■■■ 4.42
HDAC11-221ENST00000522202 CCDC180Q9P1Z9 1646 aa37.23■■■■□ 3.55
HDAC11-221ENST00000522202 ZCCHC6Q5VYS8 1495 aaKnown RBP35.82■■■■□ 3.32
HDAC11-221ENST00000522202 DCAF1Q9Y4B6 1507 aa35.3■■■■□ 3.24
HDAC11-221ENST00000522202 DCAF8L2P0C7V8 631 aa35.27■■■■□ 3.24
HDAC11-221ENST00000522202 ABCC9O60706 1549 aa35.18■■■■□ 3.22
HDAC11-221ENST00000522202 MYO15BQ96JP2 1530 aa34.9■■■■□ 3.18
HDAC11-221ENST00000522202 SHROOM4Q9ULL8 1493 aa34.76■■■■□ 3.15
HDAC11-221ENST00000522202 NACADO15069 1562 aa34.69■■■■□ 3.14
HDAC11-221ENST00000522202 RB1CC1Q8TDY2 1594 aa34.4■■■■□ 3.1
HDAC11-221ENST00000522202 SCRIBQ14160 1630 aa34.2■■■■□ 3.06
HDAC11-221ENST00000522202 UNC13AQ9UPW8 1703 aa33.66■■■□□ 2.98
HDAC11-221ENST00000522202 SUPT5HO00267 1087 aaKnown RBP33.48■■■□□ 2.95
HDAC11-221ENST00000522202 BICRAQ9NZM4 1560 aa33.3■■■□□ 2.92
HDAC11-221ENST00000522202 PABPN1Q86U42 306 aaKnown RBP eCLIP33.18■■■□□ 2.9
HDAC11-221ENST00000522202 CECR2Q9BXF3 1484 aa33.12■■■□□ 2.89
HDAC11-221ENST00000522202 RSF1Q96T23 1441 aaPredicted RBP33.08■■■□□ 2.89
HDAC11-221ENST00000522202 BAZ1AQ9NRL2 1556 aaPredicted RBP32.96■■■□□ 2.87
HDAC11-221ENST00000522202 MROH2BQ7Z745 1585 aa32.94■■■□□ 2.86
HDAC11-221ENST00000522202 SMARCA4P51532 1647 aa32.8■■■□□ 2.84
HDAC11-221ENST00000522202 WIZO95785 1651 aa32.67■■■□□ 2.82
HDAC11-221ENST00000522202 PEG3Q9GZU2 1588 aa32.4■■■□□ 2.78
HDAC11-221ENST00000522202 TOP2AP11388 1531 aaKnown RBP32.36■■■□□ 2.77
HDAC11-221ENST00000522202 EIF4G1Q04637 1599 aaKnown RBP32.32■■■□□ 2.76
HDAC11-221ENST00000522202 SMARCA2P51531 1590 aa32.28■■■□□ 2.76
HDAC11-221ENST00000522202 ATAD2BQ9ULI0 1458 aa32.27■■■□□ 2.76
HDAC11-221ENST00000522202 BAZ1BQ9UIG0 1483 aaKnown RBP32.1■■■□□ 2.73
HDAC11-221ENST00000522202 CHIC1Q5VXU3 224 aa32.04■■■□□ 2.72
HDAC11-221ENST00000522202 CCDC88BA6NC98 1476 aa32.02■■■□□ 2.72
HDAC11-221ENST00000522202 NCAPD3P42695 1498 aa32■■■□□ 2.71
HDAC11-221ENST00000522202 HMGXB3Q12766 1538 aa31.95■■■□□ 2.71
HDAC11-221ENST00000522202 CC2D2AQ9P2K1 1620 aa31.85■■■□□ 2.69
HDAC11-221ENST00000522202 TRIM41Q8WV44 630 aa31.51■■■□□ 2.64
HDAC11-221ENST00000522202 ABCC8Q09428 1581 aa31.31■■■□□ 2.6
HDAC11-221ENST00000522202 CFTRP13569 1480 aa31.28■■■□□ 2.6
HDAC11-221ENST00000522202 CADPSQ9ULU8 1353 aa31.19■■■□□ 2.58
HDAC11-221ENST00000522202 WRNQ14191 1432 aaPredicted RBP eCLIP31.16■■■□□ 2.585e-6■■■■■ 29.2
HDAC11-221ENST00000522202 PRDM2Q13029 1718 aa31.15■■■□□ 2.58
HDAC11-221ENST00000522202 SYNJ1O43426 1573 aa31■■■□□ 2.55
HDAC11-221ENST00000522202 DNAJC5BQ9UF47 199 aa31■■■□□ 2.55
HDAC11-221ENST00000522202 LAMC3Q9Y6N6 1575 aa30.93■■■□□ 2.54
HDAC11-221ENST00000522202 TOP2BQ02880 1626 aa30.9■■■□□ 2.54
HDAC11-221ENST00000522202 FAM9AQ8IZU1 332 aaPredicted RBP30.9■■■□□ 2.54
HDAC11-221ENST00000522202 BIVM-ERCC5R4GMW8 1640 aa30.88■■■□□ 2.53
HDAC11-221ENST00000522202 NESP48681 1621 aa30.86■■■□□ 2.53
HDAC11-221ENST00000522202 FANCD2Q9BXW9 1451 aa30.83■■■□□ 2.53
HDAC11-221ENST00000522202 CUX1P39880 1505 aa30.8■■■□□ 2.52
HDAC11-221ENST00000522202 LOC105371045A0A1W2PR82 267 aa30.79■■■□□ 2.52
HDAC11-221ENST00000522202 EEA1Q15075 1411 aa30.75■■■□□ 2.51
HDAC11-221ENST00000522202 SOGA1O94964 1423 aa30.73■■■□□ 2.51
HDAC11-221ENST00000522202 PDS5BQ9NTI5 1447 aa30.71■■■□□ 2.51
HDAC11-221ENST00000522202 CEP164Q9UPV0 1460 aa30.66■■■□□ 2.5
HDAC11-221ENST00000522202 RUSC2Q8N2Y8 1516 aa30.61■■■□□ 2.49
HDAC11-221ENST00000522202 CSRNP3Q8WYN3 585 aa30.58■■■□□ 2.49
HDAC11-221ENST00000522202 DNMBPQ6XZF7 1577 aa30.56■■■□□ 2.48
HDAC11-221ENST00000522202 KIF21AQ7Z4S6 1674 aa30.51■■■□□ 2.48
HDAC11-221ENST00000522202 TOPBP1Q92547 1522 aa30.5■■■□□ 2.47
HDAC11-221ENST00000522202 FGD5Q6ZNL6 1462 aa30.48■■■□□ 2.47
HDAC11-221ENST00000522202 EHMT2Q96KQ7 1210 aa30.43■■■□□ 2.46
HDAC11-221ENST00000522202 URB2Q14146 1524 aaKnown RBP30.42■■■□□ 2.46
HDAC11-221ENST00000522202 KIF27Q86VH2 1401 aa30.4■■■□□ 2.46
HDAC11-221ENST00000522202 POLA1P09884 1462 aaPredicted RBP30.33■■■□□ 2.45
HDAC11-221ENST00000522202 KIF21BO75037 1637 aa30.32■■■□□ 2.44
HDAC11-221ENST00000522202 GOLGA3Q08378 1498 aa30.31■■■□□ 2.44
HDAC11-221ENST00000522202 CUX2O14529 1486 aa30.3■■■□□ 2.44
HDAC11-221ENST00000522202 MRC2Q9UBG0 1479 aa30.29■■■□□ 2.44
HDAC11-221ENST00000522202 ABCA10Q8WWZ4 1543 aa30.23■■■□□ 2.43
HDAC11-221ENST00000522202 RAD54L2Q9Y4B4 1467 aa30.22■■■□□ 2.43
HDAC11-221ENST00000522202 ERCC6Q03468 1493 aa30.21■■■□□ 2.43
HDAC11-221ENST00000522202 TNIKQ9UKE5 1360 aa30.21■■■□□ 2.43
HDAC11-221ENST00000522202 UBTFP17480 764 aaKnown RBP30.19■■■□□ 2.42
HDAC11-221ENST00000522202 PRXQ9BXM0 1461 aa30.15■■■□□ 2.42
HDAC11-221ENST00000522202 ERICH3Q5RHP9 1530 aa30.13■■■□□ 2.41
HDAC11-221ENST00000522202 WDR62O43379 1518 aa30.11■■■□□ 2.41
HDAC11-221ENST00000522202 RAPGEF2Q9Y4G8 1499 aa30.11■■■□□ 2.41
HDAC11-221ENST00000522202 IGF1RP08069 1367 aa30.11■■■□□ 2.41
HDAC11-221ENST00000522202 WDR97A6NE52 1622 aa30.11■■■□□ 2.41
HDAC11-221ENST00000522202 TARBP1Q13395 1621 aaKnown RBP30.03■■■□□ 2.4
HDAC11-221ENST00000522202 CEP162Q5TB80 1403 aa30.02■■■□□ 2.4
HDAC11-221ENST00000522202 THOC2Q8NI27 1593 aaKnown RBP30■■■□□ 2.39
HDAC11-221ENST00000522202 CARMIL1Q5VZK9 1371 aa29.97■■■□□ 2.39
HDAC11-221ENST00000522202 ABCA5Q8WWZ7 1642 aa29.97■■■□□ 2.39
HDAC11-221ENST00000522202 TDRD9Q8NDG6 1382 aaKnown RBP29.94■■■□□ 2.38
HDAC11-221ENST00000522202 IFT140Q96RY7 1462 aa29.94■■■□□ 2.38
HDAC11-221ENST00000522202 GAPVD1Q14C86 1478 aa29.93■■■□□ 2.38
HDAC11-221ENST00000522202 CUL7Q14999 1698 aa29.9■■■□□ 2.38
HDAC11-221ENST00000522202 CLIP1P30622 1438 aa29.81■■■□□ 2.36
HDAC11-221ENST00000522202 PBRM1Q86U86 1689 aa29.76■■■□□ 2.35
HDAC11-221ENST00000522202 AQRO60306 1485 aaKnown RBP eCLIP29.75■■■□□ 2.351e-6■■■■■ 29
HDAC11-221ENST00000522202 ZNF608Q9ULD9 1512 aaPredicted RBP29.71■■■□□ 2.35
HDAC11-221ENST00000522202 GRIN2BQ13224 1484 aa29.7■■■□□ 2.35
HDAC11-221ENST00000522202 RANGAP1P46060 587 aaPredicted RBP29.65■■■□□ 2.34
HDAC11-221ENST00000522202 FHAD1B1AJZ9 1412 aa29.62■■■□□ 2.33
HDAC11-221ENST00000522202 EIF4G3O43432 1585 aaKnown RBP29.62■■■□□ 2.33
HDAC11-221ENST00000522202 ADAMTS12P58397 1594 aa29.58■■■□□ 2.33
HDAC11-221ENST00000522202 CTTNBP2Q8WZ74 1663 aa29.55■■■□□ 2.32
HDAC11-221ENST00000522202 VPS8Q8N3P4 1428 aa29.54■■■□□ 2.32
HDAC11-221ENST00000522202 SNAPC4Q5SXM2 1469 aa29.49■■■□□ 2.31
HDAC11-221ENST00000522202 ARHGAP35Q9NRY4 1499 aa29.49■■■□□ 2.31
HDAC11-221ENST00000522202 ARAP1Q96P48 1450 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms