RNA–Protein interactions for RNA: ENST00000405478.5

HDAC11-207, Transcript of histone deacetylase 11, humanhuman

TSL 5

Gene HDAC11, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-207ENST00000405478 NISCHQ9Y2I1 1504 aa66.3■■■■■ 8.2
HDAC11-207ENST00000405478 CCDC180Q9P1Z9 1646 aa59.08■■■■■ 7.05
HDAC11-207ENST00000405478 ABCC9O60706 1549 aa58.58■■■■■ 6.97
HDAC11-207ENST00000405478 RB1CC1Q8TDY2 1594 aa55.97■■■■■ 6.55
HDAC11-207ENST00000405478 NACADO15069 1562 aa55.77■■■■■ 6.52
HDAC11-207ENST00000405478 DCAF8L2P0C7V8 631 aa55.69■■■■■ 6.51
HDAC11-207ENST00000405478 MYO15BQ96JP2 1530 aa55.25■■■■■ 6.43
HDAC11-207ENST00000405478 ZCCHC6Q5VYS8 1495 aaKnown RBP55.11■■■■■ 6.41
HDAC11-207ENST00000405478 DCAF1Q9Y4B6 1507 aa54.79■■■■■ 6.36
HDAC11-207ENST00000405478 PABPN1Q86U42 306 aaKnown RBP eCLIP54.69■■■■■ 6.35
HDAC11-207ENST00000405478 UNC13AQ9UPW8 1703 aa54.57■■■■■ 6.33
HDAC11-207ENST00000405478 DNAJC5BQ9UF47 199 aa54.42■■■■■ 6.3
HDAC11-207ENST00000405478 BICRAQ9NZM4 1560 aa54.37■■■■■ 6.29
HDAC11-207ENST00000405478 SCRIBQ14160 1630 aa53.97■■■■■ 6.23
HDAC11-207ENST00000405478 SHROOM4Q9ULL8 1493 aa53.69■■■■■ 6.19
HDAC11-207ENST00000405478 EIF4G1Q04637 1599 aaKnown RBP52.97■■■■■ 6.07
HDAC11-207ENST00000405478 CC2D2AQ9P2K1 1620 aa52.89■■■■■ 6.06
HDAC11-207ENST00000405478 CECR2Q9BXF3 1484 aa52.7■■■■■ 6.03
HDAC11-207ENST00000405478 NCAPD3P42695 1498 aa51.54■■■■■ 5.84
HDAC11-207ENST00000405478 SMARCA4P51532 1647 aa51.53■■■■■ 5.84
HDAC11-207ENST00000405478 ATAD2BQ9ULI0 1458 aa51.49■■■■■ 5.83
HDAC11-207ENST00000405478 BAZ1AQ9NRL2 1556 aaPredicted RBP51.39■■■■■ 5.82
HDAC11-207ENST00000405478 SMARCA2P51531 1590 aa51.32■■■■■ 5.81
HDAC11-207ENST00000405478 HMGXB3Q12766 1538 aa51.18■■■■■ 5.78
HDAC11-207ENST00000405478 MROH2BQ7Z745 1585 aa51.12■■■■■ 5.77
HDAC11-207ENST00000405478 PEG3Q9GZU2 1588 aa51.05■■■■■ 5.76
HDAC11-207ENST00000405478 BAZ1BQ9UIG0 1483 aaKnown RBP50.99■■■■■ 5.75
HDAC11-207ENST00000405478 NESP48681 1621 aa50.52■■■■■ 5.68
HDAC11-207ENST00000405478 ERCC6Q03468 1493 aa50.5■■■■■ 5.67
HDAC11-207ENST00000405478 WIZO95785 1651 aa50.46■■■■■ 5.67
HDAC11-207ENST00000405478 RSF1Q96T23 1441 aaPredicted RBP50.33■■■■■ 5.65
HDAC11-207ENST00000405478 LAMC3Q9Y6N6 1575 aa50.19■■■■■ 5.63
HDAC11-207ENST00000405478 CUX2O14529 1486 aa50.18■■■■■ 5.62
HDAC11-207ENST00000405478 CADPSQ9ULU8 1353 aa50.02■■■■■ 5.6
HDAC11-207ENST00000405478 PDS5BQ9NTI5 1447 aa49.94■■■■■ 5.58
HDAC11-207ENST00000405478 TOP2AP11388 1531 aaKnown RBP49.92■■■■■ 5.58
HDAC11-207ENST00000405478 THOC2Q8NI27 1593 aaKnown RBP49.82■■■■■ 5.57
HDAC11-207ENST00000405478 KIF21AQ7Z4S6 1674 aa49.75■■■■■ 5.55
HDAC11-207ENST00000405478 CFTRP13569 1480 aa49.58■■■■■ 5.53
HDAC11-207ENST00000405478 MRC2Q9UBG0 1479 aa49.48■■■■■ 5.51
HDAC11-207ENST00000405478 FANCD2Q9BXW9 1451 aa49.44■■■■■ 5.5
HDAC11-207ENST00000405478 DNAJC5Q9H3Z4 198 aa49.42■■■■■ 5.5
HDAC11-207ENST00000405478 CEP164Q9UPV0 1460 aa49.4■■■■■ 5.5
HDAC11-207ENST00000405478 CCDC88BA6NC98 1476 aa49.38■■■■■ 5.5
HDAC11-207ENST00000405478 WDR62O43379 1518 aa49.32■■■■■ 5.49
HDAC11-207ENST00000405478 URB2Q14146 1524 aaKnown RBP48.99■■■■■ 5.43
HDAC11-207ENST00000405478 PRDM2Q13029 1718 aa48.89■■■■■ 5.42
HDAC11-207ENST00000405478 SUPT5HO00267 1087 aaKnown RBP48.6■■■■■ 5.37
HDAC11-207ENST00000405478 TOPBP1Q92547 1522 aa48.57■■■■■ 5.37
HDAC11-207ENST00000405478 ABCC8Q09428 1581 aa48.45■■■■■ 5.35
HDAC11-207ENST00000405478 DNMBPQ6XZF7 1577 aa48.41■■■■■ 5.34
HDAC11-207ENST00000405478 IFT140Q96RY7 1462 aa48.4■■■■■ 5.34
HDAC11-207ENST00000405478 ZNF608Q9ULD9 1512 aaPredicted RBP48.29■■■■■ 5.32
HDAC11-207ENST00000405478 POLA1P09884 1462 aaPredicted RBP48.13■■■■■ 5.3
HDAC11-207ENST00000405478 TARBP1Q13395 1621 aaKnown RBP48.04■■■■■ 5.28
HDAC11-207ENST00000405478 OSCARQ8IYS5 282 aa48.01■■■■■ 5.28
HDAC11-207ENST00000405478 CUX1P39880 1505 aa47.98■■■■■ 5.27
HDAC11-207ENST00000405478 EIF4G3O43432 1585 aaKnown RBP47.98■■■■■ 5.27
HDAC11-207ENST00000405478 RAD54L2Q9Y4B4 1467 aa47.96■■■■■ 5.27
HDAC11-207ENST00000405478 AQRO60306 1485 aaKnown RBP eCLIP47.94■■■■■ 5.261e-6■■■■■ 29
HDAC11-207ENST00000405478 FGD5Q6ZNL6 1462 aa47.91■■■■■ 5.26
HDAC11-207ENST00000405478 SOGA1O94964 1423 aa47.91■■■■■ 5.26
HDAC11-207ENST00000405478 TDRD9Q8NDG6 1382 aaKnown RBP47.76■■■■■ 5.24
HDAC11-207ENST00000405478 WDR97A6NE52 1622 aa47.56■■■■■ 5.2
HDAC11-207ENST00000405478 TRIM41Q8WV44 630 aa47.54■■■■■ 5.2
HDAC11-207ENST00000405478 FBLN2P98095 1184 aa47.47■■■■■ 5.19
HDAC11-207ENST00000405478 SNAPC4Q5SXM2 1469 aa47.46■■■■■ 5.19
HDAC11-207ENST00000405478 WRNQ14191 1432 aaPredicted RBP eCLIP47.45■■■■■ 5.195e-6■■■■■ 29.2
HDAC11-207ENST00000405478 GRIN2BQ13224 1484 aa47.41■■■■■ 5.18
HDAC11-207ENST00000405478 CHD1O14646 1710 aa47.41■■■■■ 5.18
HDAC11-207ENST00000405478 ABCA10Q8WWZ4 1543 aa47.4■■■■■ 5.18
HDAC11-207ENST00000405478 TOP2BQ02880 1626 aa47.34■■■■■ 5.17
HDAC11-207ENST00000405478 SYNJ1O43426 1573 aa47.34■■■■■ 5.17
HDAC11-207ENST00000405478 GAPVD1Q14C86 1478 aa47.33■■■■■ 5.17
HDAC11-207ENST00000405478 MAGI1Q96QZ7 1491 aaPredicted RBP47.33■■■■■ 5.17
HDAC11-207ENST00000405478 BIVM-ERCC5R4GMW8 1640 aa47.3■■■■■ 5.16
HDAC11-207ENST00000405478 RIMBP3CA6NJZ7 1639 aa47.26■■■■■ 5.16
HDAC11-207ENST00000405478 RIMBP3BA6NNM3 1639 aa47.26■■■■■ 5.16
HDAC11-207ENST00000405478 RIMBP3Q9UFD9 1639 aa47.26■■■■■ 5.16
HDAC11-207ENST00000405478 ARHGEF11O15085 1522 aa47.25■■■■■ 5.15
HDAC11-207ENST00000405478 ABCA5Q8WWZ7 1642 aa47.23■■■■■ 5.15
HDAC11-207ENST00000405478 CHMP7Q8WUX9 453 aaPredicted RBP47.22■■■■■ 5.15
HDAC11-207ENST00000405478 SYNJ2O15056 1496 aa47.18■■■■■ 5.14
HDAC11-207ENST00000405478 PBRM1Q86U86 1689 aa47.13■■■■■ 5.14
HDAC11-207ENST00000405478 CLASP1Q7Z460 1538 aa47.01■■■■■ 5.12
HDAC11-207ENST00000405478 CYB5RLQ6IPT4 315 aa46.87■■■■■ 5.09
HDAC11-207ENST00000405478 ARAP1Q96P48 1450 aa46.85■■■■■ 5.09
HDAC11-207ENST00000405478 ADAMTS12P58397 1594 aa46.85■■■■■ 5.09
HDAC11-207ENST00000405478 GRIN2AQ12879 1464 aa46.81■■■■■ 5.08
HDAC11-207ENST00000405478 ERICH3Q5RHP9 1530 aa46.79■■■■■ 5.08
HDAC11-207ENST00000405478 FHAD1B1AJZ9 1412 aa46.77■■■■■ 5.08
HDAC11-207ENST00000405478 NUP160Q12769 1436 aa46.65■■■■■ 5.06
HDAC11-207ENST00000405478 CEP170Q5SW79 1584 aa46.6■■■■■ 5.05
HDAC11-207ENST00000405478 KIF27Q86VH2 1401 aa46.48■■■■■ 5.03
HDAC11-207ENST00000405478 IGF1RP08069 1367 aa46.43■■■■■ 5.02
HDAC11-207ENST00000405478 ERCC6L2Q5T890 1561 aa46.35■■■■■ 5.01
HDAC11-207ENST00000405478 SHROOM2Q13796 1616 aa46.28■■■■■ 5
HDAC11-207ENST00000405478 CUL7Q14999 1698 aa46.18■■■■■ 4.98
HDAC11-207ENST00000405478 RUSC2Q8N2Y8 1516 aa46.17■■■■■ 4.98
HDAC11-207ENST00000405478 JPH4Q96JJ6 628 aa46.16■■■■■ 4.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms