RNA–Protein interactions for RNA: ENST00000463246.5

NECAB3-204, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 3

Gene NECAB3, Length 766 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-204ENST00000463246 NISCHQ9Y2I1 1504 aa41.18■■■■■ 4.18
NECAB3-204ENST00000463246 CCDC180Q9P1Z9 1646 aa36.86■■■■□ 3.49
NECAB3-204ENST00000463246 ABCC9O60706 1549 aa36.85■■■■□ 3.49
NECAB3-204ENST00000463246 RB1CC1Q8TDY2 1594 aa35.09■■■■□ 3.21
NECAB3-204ENST00000463246 NACADO15069 1562 aa34.82■■■■□ 3.16
NECAB3-204ENST00000463246 DCAF8L2P0C7V8 631 aa34.67■■■■□ 3.14
NECAB3-204ENST00000463246 DNAJC5BQ9UF47 199 aa34.42■■■■□ 3.1
NECAB3-204ENST00000463246 MYO15BQ96JP2 1530 aa34.35■■■■□ 3.09
NECAB3-204ENST00000463246 PABPN1Q86U42 306 aaKnown RBP eCLIP34.26■■■■□ 3.089e-8■■□□□ 11.7
NECAB3-204ENST00000463246 UNC13AQ9UPW8 1703 aa34.24■■■■□ 3.07
NECAB3-204ENST00000463246 ZCCHC6Q5VYS8 1495 aaKnown RBP34.2■■■■□ 3.06
NECAB3-204ENST00000463246 DCAF1Q9Y4B6 1507 aa34.03■■■■□ 3.04
NECAB3-204ENST00000463246 BICRAQ9NZM4 1560 aa33.98■■■■□ 3.03
NECAB3-204ENST00000463246 SCRIBQ14160 1630 aa33.61■■■□□ 2.97
NECAB3-204ENST00000463246 SHROOM4Q9ULL8 1493 aa33.59■■■□□ 2.97
NECAB3-204ENST00000463246 CC2D2AQ9P2K1 1620 aa33.28■■■□□ 2.92
NECAB3-204ENST00000463246 EIF4G1Q04637 1599 aaKnown RBP33.21■■■□□ 2.91
NECAB3-204ENST00000463246 CECR2Q9BXF3 1484 aa33.19■■■□□ 2.9
NECAB3-204ENST00000463246 SMARCA4P51532 1647 aa32.09■■■□□ 2.73
NECAB3-204ENST00000463246 NCAPD3P42695 1498 aa32.09■■■□□ 2.73
NECAB3-204ENST00000463246 ATAD2BQ9ULI0 1458 aa32.03■■■□□ 2.72
NECAB3-204ENST00000463246 SMARCA2P51531 1590 aa31.98■■■□□ 2.71
NECAB3-204ENST00000463246 BAZ1AQ9NRL2 1556 aaPredicted RBP31.93■■■□□ 2.7
NECAB3-204ENST00000463246 HMGXB3Q12766 1538 aa31.92■■■□□ 2.7
NECAB3-204ENST00000463246 ERCC6Q03468 1493 aa31.9■■■□□ 2.7
NECAB3-204ENST00000463246 CUX2O14529 1486 aa31.78■■■□□ 2.68
NECAB3-204ENST00000463246 BAZ1BQ9UIG0 1483 aaKnown RBP31.78■■■□□ 2.68
NECAB3-204ENST00000463246 PEG3Q9GZU2 1588 aa31.77■■■□□ 2.68
NECAB3-204ENST00000463246 MROH2BQ7Z745 1585 aa31.75■■■□□ 2.67
NECAB3-204ENST00000463246 DNAJC5Q9H3Z4 198 aa31.66■■■□□ 2.66
NECAB3-204ENST00000463246 NESP48681 1621 aa31.62■■■□□ 2.65
NECAB3-204ENST00000463246 LAMC3Q9Y6N6 1575 aa31.43■■■□□ 2.62
NECAB3-204ENST00000463246 WIZO95785 1651 aa31.41■■■□□ 2.62
NECAB3-204ENST00000463246 THOC2Q8NI27 1593 aaKnown RBP31.34■■■□□ 2.61
NECAB3-204ENST00000463246 KIF21AQ7Z4S6 1674 aa31.25■■■□□ 2.59
NECAB3-204ENST00000463246 PDS5BQ9NTI5 1447 aa31.25■■■□□ 2.59
NECAB3-204ENST00000463246 RSF1Q96T23 1441 aaPredicted RBP31.17■■■□□ 2.58
NECAB3-204ENST00000463246 CADPSQ9ULU8 1353 aa31.13■■■□□ 2.57
NECAB3-204ENST00000463246 MRC2Q9UBG0 1479 aa31■■■□□ 2.55
NECAB3-204ENST00000463246 TOP2AP11388 1531 aaKnown RBP30.99■■■□□ 2.55
NECAB3-204ENST00000463246 CEP164Q9UPV0 1460 aa30.9■■■□□ 2.54
NECAB3-204ENST00000463246 WDR62O43379 1518 aa30.9■■■□□ 2.54
NECAB3-204ENST00000463246 FANCD2Q9BXW9 1451 aa30.82■■■□□ 2.53
NECAB3-204ENST00000463246 CFTRP13569 1480 aa30.82■■■□□ 2.52
NECAB3-204ENST00000463246 CCDC88BA6NC98 1476 aa30.64■■■□□ 2.5
NECAB3-204ENST00000463246 PRDM2Q13029 1718 aa30.61■■■□□ 2.49
NECAB3-204ENST00000463246 URB2Q14146 1524 aaKnown RBP30.54■■■□□ 2.48
NECAB3-204ENST00000463246 TRIM41Q8WV44 630 aa30.4■■■□□ 2.46
NECAB3-204ENST00000463246 OSCARQ8IYS5 282 aa30.28■■■□□ 2.44
NECAB3-204ENST00000463246 IFT140Q96RY7 1462 aa30.25■■■□□ 2.43
NECAB3-204ENST00000463246 TOPBP1Q92547 1522 aa30.23■■■□□ 2.43
NECAB3-204ENST00000463246 ABCC8Q09428 1581 aa30.17■■■□□ 2.42
NECAB3-204ENST00000463246 ZNF608Q9ULD9 1512 aaPredicted RBP30.16■■■□□ 2.42
NECAB3-204ENST00000463246 DNMBPQ6XZF7 1577 aa30.15■■■□□ 2.42
NECAB3-204ENST00000463246 EIF4G3O43432 1585 aaKnown RBP30.07■■■□□ 2.4
NECAB3-204ENST00000463246 TARBP1Q13395 1621 aaKnown RBP29.96■■■□□ 2.39
NECAB3-204ENST00000463246 SUPT5HO00267 1087 aaKnown RBP29.96■■■□□ 2.39
NECAB3-204ENST00000463246 POLA1P09884 1462 aaPredicted RBP29.93■■■□□ 2.38
NECAB3-204ENST00000463246 RIMBP3CA6NJZ7 1639 aa29.93■■■□□ 2.38
NECAB3-204ENST00000463246 RIMBP3BA6NNM3 1639 aa29.93■■■□□ 2.38
NECAB3-204ENST00000463246 RIMBP3Q9UFD9 1639 aa29.93■■■□□ 2.38
NECAB3-204ENST00000463246 AQRO60306 1485 aaKnown RBP eCLIP29.88■■■□□ 2.374e-8■■■■■ 28.5
NECAB3-204ENST00000463246 CHD1O14646 1710 aa29.83■■■□□ 2.37
NECAB3-204ENST00000463246 ARHGEF11O15085 1522 aa29.83■■■□□ 2.37
NECAB3-204ENST00000463246 RAD54L2Q9Y4B4 1467 aa29.82■■■□□ 2.36
NECAB3-204ENST00000463246 CUX1P39880 1505 aa29.81■■■□□ 2.36
NECAB3-204ENST00000463246 FGD5Q6ZNL6 1462 aa29.78■■■□□ 2.36
NECAB3-204ENST00000463246 SOGA1O94964 1423 aa29.77■■■□□ 2.36
NECAB3-204ENST00000463246 FBLN2P98095 1184 aa29.76■■■□□ 2.35
NECAB3-204ENST00000463246 TDRD9Q8NDG6 1382 aaKnown RBP29.71■■■□□ 2.35
NECAB3-204ENST00000463246 WDR97A6NE52 1622 aa29.68■■■□□ 2.34
NECAB3-204ENST00000463246 SNAPC4Q5SXM2 1469 aa29.64■■■□□ 2.34
NECAB3-204ENST00000463246 CYB5RLQ6IPT4 315 aa29.58■■■□□ 2.33
NECAB3-204ENST00000463246 MAGI1Q96QZ7 1491 aaPredicted RBP29.55■■■□□ 2.32
NECAB3-204ENST00000463246 GRIN2BQ13224 1484 aa29.55■■■□□ 2.32
NECAB3-204ENST00000463246 CHMP7Q8WUX9 453 aaPredicted RBP29.52■■■□□ 2.32
NECAB3-204ENST00000463246 ARAP1Q96P48 1450 aa29.52■■■□□ 2.32
NECAB3-204ENST00000463246 SYNJ1O43426 1573 aa29.5■■■□□ 2.31
NECAB3-204ENST00000463246 PBRM1Q86U86 1689 aa29.47■■■□□ 2.31
NECAB3-204ENST00000463246 SYNJ2O15056 1496 aa29.45■■■□□ 2.31
NECAB3-204ENST00000463246 CLASP1Q7Z460 1538 aa29.45■■■□□ 2.3
NECAB3-204ENST00000463246 ABCA10Q8WWZ4 1543 aa29.45■■■□□ 2.3
NECAB3-204ENST00000463246 GAPVD1Q14C86 1478 aa29.43■■■□□ 2.3
NECAB3-204ENST00000463246 BIVM-ERCC5R4GMW8 1640 aa29.43■■■□□ 2.3
NECAB3-204ENST00000463246 ABCA5Q8WWZ7 1642 aa29.42■■■□□ 2.3
NECAB3-204ENST00000463246 TOP2BQ02880 1626 aa29.42■■■□□ 2.3
NECAB3-204ENST00000463246 WRNQ14191 1432 aaPredicted RBP eCLIP29.38■■■□□ 2.29
NECAB3-204ENST00000463246 TRHP20396 242 aaPredicted RBP29.33■■■□□ 2.29
NECAB3-204ENST00000463246 ADAMTS12P58397 1594 aa29.17■■■□□ 2.26
NECAB3-204ENST00000463246 GRIN2AQ12879 1464 aa29.17■■■□□ 2.26
NECAB3-204ENST00000463246 ERICH3Q5RHP9 1530 aa29.09■■■□□ 2.25
NECAB3-204ENST00000463246 CEP170Q5SW79 1584 aa29.05■■■□□ 2.24
NECAB3-204ENST00000463246 FHAD1B1AJZ9 1412 aa29.05■■■□□ 2.24
NECAB3-204ENST00000463246 NUP160Q12769 1436 aa29.03■■■□□ 2.24
NECAB3-204ENST00000463246 ERCC6L2Q5T890 1561 aa28.97■■■□□ 2.23
NECAB3-204ENST00000463246 SHROOM2Q13796 1616 aa28.91■■■□□ 2.22
NECAB3-204ENST00000463246 KIF27Q86VH2 1401 aa28.79■■■□□ 2.2
NECAB3-204ENST00000463246 PRG4Q92954 1404 aaPredicted RBP28.78■■■□□ 2.2
NECAB3-204ENST00000463246 IGF1RP08069 1367 aa28.77■■■□□ 2.2
NECAB3-204ENST00000463246 RUSC2Q8N2Y8 1516 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms