RNA–Protein interactions for RNA: ENST00000295757.7

HDAC11-201, Transcript of histone deacetylase 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDAC11, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-201ENST00000295757 NISCHQ9Y2I1 1504 aa29.08■■■□□ 2.25
HDAC11-201ENST00000295757 SHROOM4Q9ULL8 1493 aa26.44■■□□□ 1.82
HDAC11-201ENST00000295757 SUPT5HO00267 1087 aaKnown RBP26.16■■□□□ 1.78
HDAC11-201ENST00000295757 PPARGC1BQ86YN6 1023 aaKnown RBP25.53■■□□□ 1.68
HDAC11-201ENST00000295757 PCGF6Q9BYE7 350 aa25.51■■□□□ 1.67
HDAC11-201ENST00000295757 HRCP23327 699 aa25.47■■□□□ 1.67
HDAC11-201ENST00000295757 MYO15BQ96JP2 1530 aa25.4■■□□□ 1.66
HDAC11-201ENST00000295757 DCAF8L2P0C7V8 631 aa25.27■■□□□ 1.64
HDAC11-201ENST00000295757 CHIC1Q5VXU3 224 aa25.22■■□□□ 1.63
HDAC11-201ENST00000295757 LOC105371045A0A1W2PR82 267 aa24.98■■□□□ 1.59
HDAC11-201ENST00000295757 ZCCHC6Q5VYS8 1495 aaKnown RBP24.64■■□□□ 1.53
HDAC11-201ENST00000295757 EHMT2Q96KQ7 1210 aa24.62■■□□□ 1.53
HDAC11-201ENST00000295757 FAM9AQ8IZU1 332 aaPredicted RBP24.36■■□□□ 1.49
HDAC11-201ENST00000295757 TRIM26Q12899 539 aaPredicted RBP24.33■■□□□ 1.49
HDAC11-201ENST00000295757 DCAF1Q9Y4B6 1507 aa24.26■■□□□ 1.47
HDAC11-201ENST00000295757 SCAF1Q9H7N4 1312 aaKnown RBP24.15■■□□□ 1.46
HDAC11-201ENST00000295757 PELP1Q8IZL8 1130 aaKnown RBP24.13■■□□□ 1.45
HDAC11-201ENST00000295757 CCDC180Q9P1Z9 1646 aa23.94■■□□□ 1.42
HDAC11-201ENST00000295757 TRIM41Q8WV44 630 aa23.93■■□□□ 1.42
HDAC11-201ENST00000295757 TTBK1Q5TCY1 1321 aaPredicted RBP23.89■■□□□ 1.41
HDAC11-201ENST00000295757 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.79■■□□□ 1.4
HDAC11-201ENST00000295757 ZEB1P37275 1124 aaPredicted RBP23.77■■□□□ 1.4
HDAC11-201ENST00000295757 NEUROD1Q13562 356 aa23.64■■□□□ 1.37
HDAC11-201ENST00000295757 CCER1Q8TC90 406 aaPredicted RBP23.58■■□□□ 1.37
HDAC11-201ENST00000295757 GTF3C3Q9Y5Q9 886 aa23.49■■□□□ 1.35
HDAC11-201ENST00000295757 RSF1Q96T23 1441 aaPredicted RBP23.47■■□□□ 1.35
HDAC11-201ENST00000295757 RB1CC1Q8TDY2 1594 aa23.47■■□□□ 1.35
HDAC11-201ENST00000295757 ACIN1Q9UKV3 1341 aaKnown RBP23.47■■□□□ 1.35
HDAC11-201ENST00000295757 SCRIBQ14160 1630 aa23.44■■□□□ 1.34
HDAC11-201ENST00000295757 YTHDC1Q96MU7 727 aaKnown RBP23.4■■□□□ 1.34
HDAC11-201ENST00000295757 ABCC9O60706 1549 aa23.36■■□□□ 1.33
HDAC11-201ENST00000295757 DIEXFQ68CQ4 756 aaKnown RBP23.35■■□□□ 1.33
HDAC11-201ENST00000295757 MYT1Q01538 1121 aa23.15■■□□□ 1.3
HDAC11-201ENST00000295757 CENPBP07199 599 aaPredicted RBP23.14■■□□□ 1.3
HDAC11-201ENST00000295757 CECR2Q9BXF3 1484 aa23.11■■□□□ 1.29
HDAC11-201ENST00000295757 MROH2BQ7Z745 1585 aa22.93■■□□□ 1.26
HDAC11-201ENST00000295757 HNRNPUL2Q1KMD3 747 aaKnown RBP22.92■■□□□ 1.26
HDAC11-201ENST00000295757 RANGAP1P46060 587 aaPredicted RBP22.9■■□□□ 1.26
HDAC11-201ENST00000295757 MIER1Q8N108 512 aa22.88■■□□□ 1.25
HDAC11-201ENST00000295757 WIZO95785 1651 aa22.88■■□□□ 1.25
HDAC11-201ENST00000295757 UBTFP17480 764 aaKnown RBP22.87■■□□□ 1.25
HDAC11-201ENST00000295757 ZNF316A6NFI3 1004 aaPredicted RBP22.84■■□□□ 1.25
HDAC11-201ENST00000295757 ABCC8Q09428 1581 aa22.81■■□□□ 1.24
HDAC11-201ENST00000295757 CCDC88BA6NC98 1476 aa22.73■■□□□ 1.23
HDAC11-201ENST00000295757 CEP162Q5TB80 1403 aa22.73■■□□□ 1.23
HDAC11-201ENST00000295757 SOGA1O94964 1423 aa22.71■■□□□ 1.23
HDAC11-201ENST00000295757 RUSC2Q8N2Y8 1516 aa22.65■■□□□ 1.22
HDAC11-201ENST00000295757 CSRNP3Q8WYN3 585 aa22.51■■□□□ 1.19
HDAC11-201ENST00000295757 WRNQ14191 1432 aaPredicted RBP eCLIP22.43■■□□□ 1.185e-6■■■■■ 29.2
HDAC11-201ENST00000295757 TNIKQ9UKE5 1360 aa22.39■■□□□ 1.17
HDAC11-201ENST00000295757 EIF4G1Q04637 1599 aaKnown RBP22.37■■□□□ 1.17
HDAC11-201ENST00000295757 BAZ1AQ9NRL2 1556 aaPredicted RBP22.37■■□□□ 1.17
HDAC11-201ENST00000295757 BCANQ96GW7 911 aa22.33■■□□□ 1.16
HDAC11-201ENST00000295757 APLP2Q06481 763 aa22.31■■□□□ 1.16
HDAC11-201ENST00000295757 SUPT16HQ9Y5B9 1047 aaKnown RBP22.29■■□□□ 1.16
HDAC11-201ENST00000295757 ITGAEP38570 1179 aa22.27■■□□□ 1.16
HDAC11-201ENST00000295757 KCNH8Q96L42 1107 aa22.26■■□□□ 1.15
HDAC11-201ENST00000295757 PABPN1Q86U42 306 aaKnown RBP eCLIP22.24■■□□□ 1.15
HDAC11-201ENST00000295757 NACADO15069 1562 aa22.23■■□□□ 1.15
HDAC11-201ENST00000295757 GOLGA3Q08378 1498 aa22.19■■□□□ 1.14
HDAC11-201ENST00000295757 SMARCA2P51531 1590 aa22.18■■□□□ 1.14
HDAC11-201ENST00000295757 CLIP1P30622 1438 aa22.17■■□□□ 1.14
HDAC11-201ENST00000295757 TOP2AP11388 1531 aaKnown RBP22.14■■□□□ 1.13
HDAC11-201ENST00000295757 TSHZ2Q9NRE2 1034 aa22.11■■□□□ 1.13
HDAC11-201ENST00000295757 KANK4Q5T7N3 995 aaPredicted RBP22.04■■□□□ 1.12
HDAC11-201ENST00000295757 SMARCA4P51532 1647 aa22.02■■□□□ 1.12
HDAC11-201ENST00000295757 RAPGEF2Q9Y4G8 1499 aa22.02■■□□□ 1.12
HDAC11-201ENST00000295757 HIRIP3Q9BW71 556 aaPredicted RBP22.01■■□□□ 1.11
HDAC11-201ENST00000295757 DHX57Q6P158 1386 aaKnown RBP21.98■■□□□ 1.11
HDAC11-201ENST00000295757 VPS8Q8N3P4 1428 aa21.98■■□□□ 1.11
HDAC11-201ENST00000295757 EEA1Q15075 1411 aa21.96■■□□□ 1.11
HDAC11-201ENST00000295757 BCL11AQ9H165 835 aa21.96■■□□□ 1.11
HDAC11-201ENST00000295757 CEP164Q9UPV0 1460 aa21.94■■□□□ 1.1
HDAC11-201ENST00000295757 SYNJ1O43426 1573 aa21.94■■□□□ 1.1
HDAC11-201ENST00000295757 FKBP8Q14318 412 aa21.93■■□□□ 1.1
HDAC11-201ENST00000295757 DDX10Q13206 875 aaKnown RBP21.88■■□□□ 1.09
HDAC11-201ENST00000295757 ANP32EQ9BTT0 268 aa21.88■■□□□ 1.09
HDAC11-201ENST00000295757 TRIM52Q96A61 297 aa21.85■■□□□ 1.09
HDAC11-201ENST00000295757 KIF21BO75037 1637 aa21.83■■□□□ 1.09
HDAC11-201ENST00000295757 SIN3AQ96ST3 1273 aa21.78■■□□□ 1.08
HDAC11-201ENST00000295757 ATP1B4Q9UN42 357 aaPredicted RBP21.72■■□□□ 1.07
HDAC11-201ENST00000295757 IRX6P78412 446 aaPredicted RBP21.71■■□□□ 1.07
HDAC11-201ENST00000295757 UNC13AQ9UPW8 1703 aa21.67■■□□□ 1.06
HDAC11-201ENST00000295757 FAM50AQ14320 339 aaKnown RBP21.65■■□□□ 1.06
HDAC11-201ENST00000295757 ARAP1Q96P48 1450 aa21.63■■□□□ 1.05
HDAC11-201ENST00000295757 RBM19Q9Y4C8 960 aaKnown RBP21.63■■□□□ 1.05
HDAC11-201ENST00000295757 P3H3Q8IVL6 736 aa21.61■■□□□ 1.05
HDAC11-201ENST00000295757 RAB3GAP2Q9H2M9 1393 aa21.6■■□□□ 1.05
HDAC11-201ENST00000295757 CLSPNQ9HAW4 1339 aa21.6■■□□□ 1.05
HDAC11-201ENST00000295757 NEFLP07196 543 aa21.59■■□□□ 1.05
HDAC11-201ENST00000295757 CCNB3Q8WWL7 1395 aa21.57■■□□□ 1.04
HDAC11-201ENST00000295757 BAZ1BQ9UIG0 1483 aaKnown RBP21.56■■□□□ 1.04
HDAC11-201ENST00000295757 WDR97A6NE52 1622 aa21.49■■□□□ 1.03
HDAC11-201ENST00000295757 MSH5O43196 834 aa21.47■■□□□ 1.03
HDAC11-201ENST00000295757 RRBP1Q9P2E9 1410 aaKnown RBP21.44■■□□□ 1.02
HDAC11-201ENST00000295757 MAPKBP1O60336 1514 aa21.43■■□□□ 1.02
HDAC11-201ENST00000295757 ANP32CO43423 234 aa21.42■■□□□ 1.02
HDAC11-201ENST00000295757 ATAD2BQ9ULI0 1458 aa21.41■■□□□ 1.02
HDAC11-201ENST00000295757 CNGB1Q14028 1251 aaPredicted RBP21.41■■□□□ 1.02
HDAC11-201ENST00000295757 PPP1R15AO75807 674 aaPredicted RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms