RNA–Protein interactions for RNA: ENST00000495099.2

HDAC11-219, Transcript of histone deacetylase 11, humanhuman

TSL 5

Gene HDAC11, Length 198 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-219ENST00000495099 NISCHQ9Y2I1 1504 aa30.05■■■□□ 2.4
HDAC11-219ENST00000495099 ABCC9O60706 1549 aa28.94■■■□□ 2.22
HDAC11-219ENST00000495099 DNAJC5BQ9UF47 199 aa28.29■■■□□ 2.12
HDAC11-219ENST00000495099 CCDC180Q9P1Z9 1646 aa27.56■■■□□ 2
HDAC11-219ENST00000495099 RB1CC1Q8TDY2 1594 aa26.88■■□□□ 1.89
HDAC11-219ENST00000495099 DNAJC5Q9H3Z4 198 aa26.85■■□□□ 1.89
HDAC11-219ENST00000495099 PABPN1Q86U42 306 aaKnown RBP eCLIP26.75■■□□□ 1.87
HDAC11-219ENST00000495099 UNC13AQ9UPW8 1703 aa26.46■■□□□ 1.83
HDAC11-219ENST00000495099 NACADO15069 1562 aa26.31■■□□□ 1.8
HDAC11-219ENST00000495099 BICRAQ9NZM4 1560 aa26.18■■□□□ 1.78
HDAC11-219ENST00000495099 CECR2Q9BXF3 1484 aa26.15■■□□□ 1.78
HDAC11-219ENST00000495099 DCAF8L2P0C7V8 631 aa26.12■■□□□ 1.77
HDAC11-219ENST00000495099 CC2D2AQ9P2K1 1620 aa26.06■■□□□ 1.76
HDAC11-219ENST00000495099 EIF4G1Q04637 1599 aaKnown RBP25.63■■□□□ 1.69
HDAC11-219ENST00000495099 SHROOM4Q9ULL8 1493 aa25.47■■□□□ 1.67
HDAC11-219ENST00000495099 MYO15BQ96JP2 1530 aa25.38■■□□□ 1.65
HDAC11-219ENST00000495099 CUX2O14529 1486 aa25.34■■□□□ 1.65
HDAC11-219ENST00000495099 TRIM41Q8WV44 630 aa25.31■■□□□ 1.64
HDAC11-219ENST00000495099 SCRIBQ14160 1630 aa25.16■■□□□ 1.62
HDAC11-219ENST00000495099 ERCC6Q03468 1493 aa25.06■■□□□ 1.6
HDAC11-219ENST00000495099 ZCCHC6Q5VYS8 1495 aaKnown RBP24.86■■□□□ 1.57
HDAC11-219ENST00000495099 DCAF1Q9Y4B6 1507 aa24.68■■□□□ 1.54
HDAC11-219ENST00000495099 NESP48681 1621 aa24.5■■□□□ 1.51
HDAC11-219ENST00000495099 THOC2Q8NI27 1593 aaKnown RBP24.47■■□□□ 1.51
HDAC11-219ENST00000495099 SMARCA2P51531 1590 aa24.29■■□□□ 1.48
HDAC11-219ENST00000495099 NCAPD3P42695 1498 aa24.27■■□□□ 1.48
HDAC11-219ENST00000495099 KIF21AQ7Z4S6 1674 aa24.21■■□□□ 1.47
HDAC11-219ENST00000495099 BAZ1AQ9NRL2 1556 aaPredicted RBP24.13■■□□□ 1.45
HDAC11-219ENST00000495099 AEBP2Q6ZN18 517 aaPredicted RBP24.1■■□□□ 1.45
HDAC11-219ENST00000495099 ATAD2BQ9ULI0 1458 aa24.07■■□□□ 1.44
HDAC11-219ENST00000495099 HMGXB3Q12766 1538 aa24■■□□□ 1.43
HDAC11-219ENST00000495099 LAMC3Q9Y6N6 1575 aa24■■□□□ 1.43
HDAC11-219ENST00000495099 OSCARQ8IYS5 282 aa24■■□□□ 1.43
HDAC11-219ENST00000495099 RIMBP3CA6NJZ7 1639 aa23.95■■□□□ 1.43
HDAC11-219ENST00000495099 RIMBP3BA6NNM3 1639 aa23.95■■□□□ 1.43
HDAC11-219ENST00000495099 RIMBP3Q9UFD9 1639 aa23.95■■□□□ 1.43
HDAC11-219ENST00000495099 PDS5BQ9NTI5 1447 aa23.87■■□□□ 1.41
HDAC11-219ENST00000495099 TRHP20396 242 aaPredicted RBP23.83■■□□□ 1.41
HDAC11-219ENST00000495099 BAZ1BQ9UIG0 1483 aaKnown RBP23.81■■□□□ 1.4
HDAC11-219ENST00000495099 MRC2Q9UBG0 1479 aa23.8■■□□□ 1.4
HDAC11-219ENST00000495099 SMARCA4P51532 1647 aa23.78■■□□□ 1.4
HDAC11-219ENST00000495099 WDR62O43379 1518 aa23.77■■□□□ 1.4
HDAC11-219ENST00000495099 ARHGEF11O15085 1522 aa23.68■■□□□ 1.38
HDAC11-219ENST00000495099 CYB5RLQ6IPT4 315 aa23.62■■□□□ 1.37
HDAC11-219ENST00000495099 CADPSQ9ULU8 1353 aa23.5■■□□□ 1.35
HDAC11-219ENST00000495099 CEP164Q9UPV0 1460 aa23.45■■□□□ 1.34
HDAC11-219ENST00000495099 PEG3Q9GZU2 1588 aa23.44■■□□□ 1.34
HDAC11-219ENST00000495099 ARAP1Q96P48 1450 aa23.36■■□□□ 1.33
HDAC11-219ENST00000495099 FANCD2Q9BXW9 1451 aa23.3■■□□□ 1.32
HDAC11-219ENST00000495099 ILDR1Q86SU0 546 aaPredicted RBP23.29■■□□□ 1.32
HDAC11-219ENST00000495099 URB2Q14146 1524 aaKnown RBP23.22■■□□□ 1.31
HDAC11-219ENST00000495099 MROH2BQ7Z745 1585 aa23.21■■□□□ 1.31
HDAC11-219ENST00000495099 ZNF608Q9ULD9 1512 aaPredicted RBP23.18■■□□□ 1.3
HDAC11-219ENST00000495099 CHD1O14646 1710 aa23.17■■□□□ 1.3
HDAC11-219ENST00000495099 RSF1Q96T23 1441 aaPredicted RBP23■■□□□ 1.27
HDAC11-219ENST00000495099 EIF4G3O43432 1585 aaKnown RBP23■■□□□ 1.27
HDAC11-219ENST00000495099 IFT140Q96RY7 1462 aa22.98■■□□□ 1.27
HDAC11-219ENST00000495099 FBLN2P98095 1184 aa22.97■■□□□ 1.27
HDAC11-219ENST00000495099 WIZO95785 1651 aa22.95■■□□□ 1.26
HDAC11-219ENST00000495099 CFTRP13569 1480 aa22.95■■□□□ 1.26
HDAC11-219ENST00000495099 PRDM2Q13029 1718 aa22.79■■□□□ 1.24
HDAC11-219ENST00000495099 AQRO60306 1485 aaKnown RBP eCLIP22.79■■□□□ 1.241e-6■■■■■ 29
HDAC11-219ENST00000495099 TOPBP1Q92547 1522 aa22.72■■□□□ 1.23
HDAC11-219ENST00000495099 CLASP1Q7Z460 1538 aa22.71■■□□□ 1.23
HDAC11-219ENST00000495099 TARBP1Q13395 1621 aaKnown RBP22.64■■□□□ 1.21
HDAC11-219ENST00000495099 SYNJ1O43426 1573 aa22.59■■□□□ 1.21
HDAC11-219ENST00000495099 GAPVD1Q14C86 1478 aa22.59■■□□□ 1.21
HDAC11-219ENST00000495099 KDM4FA0A1W2PPD8 638 aa22.58■■□□□ 1.21
HDAC11-219ENST00000495099 KIF13AQ9H1H9 1805 aa22.57■■□□□ 1.2
HDAC11-219ENST00000495099 TOP2AP11388 1531 aaKnown RBP22.57■■□□□ 1.2
HDAC11-219ENST00000495099 SNAPC4Q5SXM2 1469 aa22.52■■□□□ 1.2
HDAC11-219ENST00000495099 DNMBPQ6XZF7 1577 aa22.51■■□□□ 1.19
HDAC11-219ENST00000495099 CHMP7Q8WUX9 453 aaPredicted RBP22.49■■□□□ 1.19
HDAC11-219ENST00000495099 ABCC8Q09428 1581 aa22.48■■□□□ 1.19
HDAC11-219ENST00000495099 TDRD9Q8NDG6 1382 aaKnown RBP22.44■■□□□ 1.18
HDAC11-219ENST00000495099 RAD54L2Q9Y4B4 1467 aa22.41■■□□□ 1.18
HDAC11-219ENST00000495099 POLA1P09884 1462 aaPredicted RBP22.4■■□□□ 1.18
HDAC11-219ENST00000495099 ERCC6L2Q5T890 1561 aa22.38■■□□□ 1.17
HDAC11-219ENST00000495099 CCDC88BA6NC98 1476 aa22.36■■□□□ 1.17
HDAC11-219ENST00000495099 MAGI1Q96QZ7 1491 aaPredicted RBP22.31■■□□□ 1.16
HDAC11-219ENST00000495099 SYNJ2O15056 1496 aa22.28■■□□□ 1.16
HDAC11-219ENST00000495099 HECW2Q9P2P5 1572 aa22.27■■□□□ 1.16
HDAC11-219ENST00000495099 KDM6BO15054 1643 aa22.27■■□□□ 1.16
HDAC11-219ENST00000495099 SOGA1O94964 1423 aa22.26■■□□□ 1.15
HDAC11-219ENST00000495099 TSPOAP1O95153 1857 aa22.2■■□□□ 1.14
HDAC11-219ENST00000495099 FAM69CQ0P6D2 419 aa22.2■■□□□ 1.14
HDAC11-219ENST00000495099 GRIN2BQ13224 1484 aa22.2■■□□□ 1.14
HDAC11-219ENST00000495099 WDR97A6NE52 1622 aa22.19■■□□□ 1.14
HDAC11-219ENST00000495099 PBRM1Q86U86 1689 aa22.18■■□□□ 1.14
HDAC11-219ENST00000495099 FBXO41Q8TF61 875 aa22.17■■□□□ 1.14
HDAC11-219ENST00000495099 CEP170Q5SW79 1584 aa22.13■■□□□ 1.13
HDAC11-219ENST00000495099 ADGRL1O94910 1474 aa22.11■■□□□ 1.13
HDAC11-219ENST00000495099 FGD5Q6ZNL6 1462 aa22.1■■□□□ 1.13
HDAC11-219ENST00000495099 ABCC10Q5T3U5 1492 aa22.09■■□□□ 1.13
HDAC11-219ENST00000495099 DIP2BQ9P265 1576 aa22.08■■□□□ 1.12
HDAC11-219ENST00000495099 LMTK3Q96Q04 1460 aa22.07■■□□□ 1.12
HDAC11-219ENST00000495099 SHROOM2Q13796 1616 aa21.98■■□□□ 1.11
HDAC11-219ENST00000495099 GRIN2AQ12879 1464 aa21.94■■□□□ 1.1
HDAC11-219ENST00000495099 MAPKBP1O60336 1514 aa21.92■■□□□ 1.1
HDAC11-219ENST00000495099 NPM1P06748 294 aaKnown RBP eCLIP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms