RNA–Protein interactions for RNA: ENST00000475818.5

HDAC11-217, Transcript of histone deacetylase 11, humanhuman

TSL 3

Gene HDAC11, Length 1,271 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-217ENST00000475818 NISCHQ9Y2I1 1504 aa51.88■■■■■ 5.9
HDAC11-217ENST00000475818 ABCC9O60706 1549 aa47.83■■■■■ 5.25
HDAC11-217ENST00000475818 CCDC180Q9P1Z9 1646 aa46.83■■■■■ 5.09
HDAC11-217ENST00000475818 DNAJC5BQ9UF47 199 aa45.62■■■■■ 4.89
HDAC11-217ENST00000475818 RB1CC1Q8TDY2 1594 aa45.04■■■■■ 4.8
HDAC11-217ENST00000475818 NACADO15069 1562 aa44.51■■■■■ 4.72
HDAC11-217ENST00000475818 PABPN1Q86U42 306 aaKnown RBP eCLIP44.45■■■■■ 4.71
HDAC11-217ENST00000475818 DCAF8L2P0C7V8 631 aa44.32■■■■■ 4.69
HDAC11-217ENST00000475818 UNC13AQ9UPW8 1703 aa43.96■■■■■ 4.63
HDAC11-217ENST00000475818 BICRAQ9NZM4 1560 aa43.78■■■■■ 4.6
HDAC11-217ENST00000475818 MYO15BQ96JP2 1530 aa43.55■■■■■ 4.56
HDAC11-217ENST00000475818 CECR2Q9BXF3 1484 aa43.13■■■■■ 4.5
HDAC11-217ENST00000475818 CC2D2AQ9P2K1 1620 aa43.08■■■■■ 4.49
HDAC11-217ENST00000475818 SHROOM4Q9ULL8 1493 aa43■■■■■ 4.47
HDAC11-217ENST00000475818 ZCCHC6Q5VYS8 1495 aaKnown RBP42.81■■■■■ 4.44
HDAC11-217ENST00000475818 EIF4G1Q04637 1599 aaKnown RBP42.78■■■■■ 4.44
HDAC11-217ENST00000475818 SCRIBQ14160 1630 aa42.77■■■■■ 4.44
HDAC11-217ENST00000475818 DCAF1Q9Y4B6 1507 aa42.71■■■■■ 4.43
HDAC11-217ENST00000475818 DNAJC5Q9H3Z4 198 aa42.44■■■■■ 4.38
HDAC11-217ENST00000475818 CUX2O14529 1486 aa41.46■■■■■ 4.23
HDAC11-217ENST00000475818 ERCC6Q03468 1493 aa41.34■■■■■ 4.21
HDAC11-217ENST00000475818 NCAPD3P42695 1498 aa41.12■■■■■ 4.17
HDAC11-217ENST00000475818 ATAD2BQ9ULI0 1458 aa40.92■■■■■ 4.14
HDAC11-217ENST00000475818 NESP48681 1621 aa40.85■■■■■ 4.13
HDAC11-217ENST00000475818 HMGXB3Q12766 1538 aa40.72■■■■■ 4.11
HDAC11-217ENST00000475818 SMARCA2P51531 1590 aa40.71■■■■■ 4.11
HDAC11-217ENST00000475818 SMARCA4P51532 1647 aa40.64■■■■■ 4.1
HDAC11-217ENST00000475818 THOC2Q8NI27 1593 aaKnown RBP40.52■■■■■ 4.08
HDAC11-217ENST00000475818 BAZ1BQ9UIG0 1483 aaKnown RBP40.49■■■■■ 4.07
HDAC11-217ENST00000475818 TRIM41Q8WV44 630 aa40.36■■■■■ 4.05
HDAC11-217ENST00000475818 BAZ1AQ9NRL2 1556 aaPredicted RBP40.31■■■■■ 4.04
HDAC11-217ENST00000475818 LAMC3Q9Y6N6 1575 aa40.31■■■■■ 4.04
HDAC11-217ENST00000475818 KIF21AQ7Z4S6 1674 aa40.2■■■■■ 4.03
HDAC11-217ENST00000475818 PEG3Q9GZU2 1588 aa40.18■■■■■ 4.02
HDAC11-217ENST00000475818 PDS5BQ9NTI5 1447 aa40.15■■■■■ 4.02
HDAC11-217ENST00000475818 MROH2BQ7Z745 1585 aa40.01■■■■□ 3.99
HDAC11-217ENST00000475818 MRC2Q9UBG0 1479 aa39.88■■■■□ 3.97
HDAC11-217ENST00000475818 CADPSQ9ULU8 1353 aa39.86■■■■□ 3.97
HDAC11-217ENST00000475818 WDR62O43379 1518 aa39.76■■■■□ 3.96
HDAC11-217ENST00000475818 CEP164Q9UPV0 1460 aa39.55■■■■□ 3.92
HDAC11-217ENST00000475818 OSCARQ8IYS5 282 aa39.48■■■■□ 3.91
HDAC11-217ENST00000475818 WIZO95785 1651 aa39.48■■■■□ 3.91
HDAC11-217ENST00000475818 FANCD2Q9BXW9 1451 aa39.44■■■■□ 3.9
HDAC11-217ENST00000475818 CFTRP13569 1480 aa39.22■■■■□ 3.87
HDAC11-217ENST00000475818 URB2Q14146 1524 aaKnown RBP39.18■■■■□ 3.86
HDAC11-217ENST00000475818 RIMBP3CA6NJZ7 1639 aa39.04■■■■□ 3.84
HDAC11-217ENST00000475818 RIMBP3BA6NNM3 1639 aa39.04■■■■□ 3.84
HDAC11-217ENST00000475818 RIMBP3Q9UFD9 1639 aa39.04■■■■□ 3.84
HDAC11-217ENST00000475818 TOP2AP11388 1531 aaKnown RBP38.89■■■■□ 3.82
HDAC11-217ENST00000475818 RSF1Q96T23 1441 aaPredicted RBP38.87■■■■□ 3.81
HDAC11-217ENST00000475818 ZNF608Q9ULD9 1512 aaPredicted RBP38.86■■■■□ 3.81
HDAC11-217ENST00000475818 ARHGEF11O15085 1522 aa38.85■■■■□ 3.81
HDAC11-217ENST00000475818 IFT140Q96RY7 1462 aa38.78■■■■□ 3.8
HDAC11-217ENST00000475818 CYB5RLQ6IPT4 315 aa38.68■■■■□ 3.78
HDAC11-217ENST00000475818 PRDM2Q13029 1718 aa38.64■■■■□ 3.78
HDAC11-217ENST00000475818 TOPBP1Q92547 1522 aa38.59■■■■□ 3.77
HDAC11-217ENST00000475818 TRHP20396 242 aaPredicted RBP38.55■■■■□ 3.76
HDAC11-217ENST00000475818 EIF4G3O43432 1585 aaKnown RBP38.54■■■■□ 3.76
HDAC11-217ENST00000475818 CCDC88BA6NC98 1476 aa38.5■■■■□ 3.75
HDAC11-217ENST00000475818 ARAP1Q96P48 1450 aa38.43■■■■□ 3.74
HDAC11-217ENST00000475818 AQRO60306 1485 aaKnown RBP eCLIP38.41■■■■□ 3.741e-6■■■■■ 29
HDAC11-217ENST00000475818 CHD1O14646 1710 aa38.39■■■■□ 3.74
HDAC11-217ENST00000475818 FBLN2P98095 1184 aa38.38■■■■□ 3.73
HDAC11-217ENST00000475818 ABCC8Q09428 1581 aa38.37■■■■□ 3.73
HDAC11-217ENST00000475818 DNMBPQ6XZF7 1577 aa38.35■■■■□ 3.73
HDAC11-217ENST00000475818 TARBP1Q13395 1621 aaKnown RBP38.27■■■■□ 3.72
HDAC11-217ENST00000475818 POLA1P09884 1462 aaPredicted RBP38.15■■■■□ 3.7
HDAC11-217ENST00000475818 RAD54L2Q9Y4B4 1467 aa38.08■■■■□ 3.69
HDAC11-217ENST00000475818 TDRD9Q8NDG6 1382 aaKnown RBP38.06■■■■□ 3.68
HDAC11-217ENST00000475818 AEBP2Q6ZN18 517 aaPredicted RBP38.02■■■■□ 3.68
HDAC11-217ENST00000475818 SNAPC4Q5SXM2 1469 aa37.97■■■■□ 3.67
HDAC11-217ENST00000475818 SOGA1O94964 1423 aa37.97■■■■□ 3.67
HDAC11-217ENST00000475818 CLASP1Q7Z460 1538 aa37.95■■■■□ 3.67
HDAC11-217ENST00000475818 CHMP7Q8WUX9 453 aaPredicted RBP37.9■■■■□ 3.66
HDAC11-217ENST00000475818 SYNJ1O43426 1573 aa37.84■■■■□ 3.65
HDAC11-217ENST00000475818 FGD5Q6ZNL6 1462 aa37.81■■■■□ 3.64
HDAC11-217ENST00000475818 MAGI1Q96QZ7 1491 aaPredicted RBP37.77■■■■□ 3.64
HDAC11-217ENST00000475818 WDR97A6NE52 1622 aa37.74■■■■□ 3.63
HDAC11-217ENST00000475818 GRIN2BQ13224 1484 aa37.71■■■■□ 3.63
HDAC11-217ENST00000475818 SYNJ2O15056 1496 aa37.68■■■■□ 3.62
HDAC11-217ENST00000475818 GAPVD1Q14C86 1478 aa37.64■■■■□ 3.62
HDAC11-217ENST00000475818 CUX1P39880 1505 aa37.63■■■■□ 3.61
HDAC11-217ENST00000475818 PBRM1Q86U86 1689 aa37.47■■■■□ 3.59
HDAC11-217ENST00000475818 ERCC6L2Q5T890 1561 aa37.37■■■■□ 3.57
HDAC11-217ENST00000475818 ABCA5Q8WWZ7 1642 aa37.29■■■■□ 3.56
HDAC11-217ENST00000475818 ABCA10Q8WWZ4 1543 aa37.28■■■■□ 3.56
HDAC11-217ENST00000475818 GRIN2AQ12879 1464 aa37.23■■■■□ 3.55
HDAC11-217ENST00000475818 CEP170Q5SW79 1584 aa37.19■■■■□ 3.54
HDAC11-217ENST00000475818 NUP160Q12769 1436 aa37.12■■■■□ 3.53
HDAC11-217ENST00000475818 ADAMTS12P58397 1594 aa37.1■■■■□ 3.53
HDAC11-217ENST00000475818 SHROOM2Q13796 1616 aa37.01■■■■□ 3.52
HDAC11-217ENST00000475818 WRNQ14191 1432 aaPredicted RBP eCLIP37■■■■□ 3.515e-6■■■■■ 29.2
HDAC11-217ENST00000475818 KIF13AQ9H1H9 1805 aa36.97■■■■□ 3.51
HDAC11-217ENST00000475818 FHAD1B1AJZ9 1412 aa36.96■■■■□ 3.51
HDAC11-217ENST00000475818 PRG4Q92954 1404 aaPredicted RBP36.89■■■■□ 3.5
HDAC11-217ENST00000475818 FAM69CQ0P6D2 419 aa36.82■■■■□ 3.48
HDAC11-217ENST00000475818 JPH4Q96JJ6 628 aa36.78■■■■□ 3.48
HDAC11-217ENST00000475818 ERICH3Q5RHP9 1530 aa36.78■■■■□ 3.48
HDAC11-217ENST00000475818 TOP2BQ02880 1626 aa36.75■■■■□ 3.47
HDAC11-217ENST00000475818 ABCC10Q5T3U5 1492 aa36.74■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms