RNA–Protein interactions for RNA: ENST00000433119.5

HDAC11-211, Transcript of histone deacetylase 11, humanhuman

TSL 1 (best) BASIC

Gene HDAC11, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-211ENST00000433119 NISCHQ9Y2I1 1504 aa46.33■■■■■ 5.01
HDAC11-211ENST00000433119 CCDC180Q9P1Z9 1646 aa40.21■■■■■ 4.03
HDAC11-211ENST00000433119 ZCCHC6Q5VYS8 1495 aaKnown RBP38.95■■■■□ 3.83
HDAC11-211ENST00000433119 DCAF8L2P0C7V8 631 aa38.36■■■■□ 3.73
HDAC11-211ENST00000433119 DCAF1Q9Y4B6 1507 aa38.21■■■■□ 3.71
HDAC11-211ENST00000433119 SHROOM4Q9ULL8 1493 aa38.15■■■■□ 3.7
HDAC11-211ENST00000433119 ABCC9O60706 1549 aa37.96■■■■□ 3.67
HDAC11-211ENST00000433119 MYO15BQ96JP2 1530 aa37.63■■■■□ 3.61
HDAC11-211ENST00000433119 NACADO15069 1562 aa37.4■■■■□ 3.58
HDAC11-211ENST00000433119 SCRIBQ14160 1630 aa37.16■■■■□ 3.54
HDAC11-211ENST00000433119 RB1CC1Q8TDY2 1594 aa37.04■■■■□ 3.52
HDAC11-211ENST00000433119 SUPT5HO00267 1087 aaKnown RBP36.82■■■■□ 3.48
HDAC11-211ENST00000433119 UNC13AQ9UPW8 1703 aa36.43■■■■□ 3.42
HDAC11-211ENST00000433119 RSF1Q96T23 1441 aaPredicted RBP36.08■■■■□ 3.37
HDAC11-211ENST00000433119 CECR2Q9BXF3 1484 aa36.07■■■■□ 3.37
HDAC11-211ENST00000433119 BICRAQ9NZM4 1560 aa36■■■■□ 3.35
HDAC11-211ENST00000433119 PABPN1Q86U42 306 aaKnown RBP eCLIP35.9■■■■□ 3.34
HDAC11-211ENST00000433119 MROH2BQ7Z745 1585 aa35.87■■■■□ 3.33
HDAC11-211ENST00000433119 BAZ1AQ9NRL2 1556 aaPredicted RBP35.72■■■■□ 3.31
HDAC11-211ENST00000433119 WIZO95785 1651 aa35.62■■■■□ 3.29
HDAC11-211ENST00000433119 SMARCA4P51532 1647 aa35.57■■■■□ 3.29
HDAC11-211ENST00000433119 CHIC1Q5VXU3 224 aa35.33■■■■□ 3.25
HDAC11-211ENST00000433119 TOP2AP11388 1531 aaKnown RBP35.14■■■■□ 3.22
HDAC11-211ENST00000433119 PEG3Q9GZU2 1588 aa35.07■■■■□ 3.2
HDAC11-211ENST00000433119 ATAD2BQ9ULI0 1458 aa34.92■■■■□ 3.18
HDAC11-211ENST00000433119 SMARCA2P51531 1590 aa34.87■■■■□ 3.17
HDAC11-211ENST00000433119 EIF4G1Q04637 1599 aaKnown RBP34.86■■■■□ 3.17
HDAC11-211ENST00000433119 CCDC88BA6NC98 1476 aa34.86■■■■□ 3.17
HDAC11-211ENST00000433119 BAZ1BQ9UIG0 1483 aaKnown RBP34.73■■■■□ 3.15
HDAC11-211ENST00000433119 NCAPD3P42695 1498 aa34.54■■■■□ 3.12
HDAC11-211ENST00000433119 TRIM41Q8WV44 630 aa34.53■■■■□ 3.12
HDAC11-211ENST00000433119 HMGXB3Q12766 1538 aa34.49■■■■□ 3.11
HDAC11-211ENST00000433119 CC2D2AQ9P2K1 1620 aa34.32■■■■□ 3.08
HDAC11-211ENST00000433119 ABCC8Q09428 1581 aa34.27■■■■□ 3.08
HDAC11-211ENST00000433119 LOC105371045A0A1W2PR82 267 aa34.08■■■■□ 3.05
HDAC11-211ENST00000433119 FAM9AQ8IZU1 332 aaPredicted RBP34.01■■■■□ 3.04
HDAC11-211ENST00000433119 WRNQ14191 1432 aaPredicted RBP eCLIP33.93■■■■□ 3.025e-6■■■■■ 29.2
HDAC11-211ENST00000433119 CFTRP13569 1480 aa33.86■■■■□ 3.01
HDAC11-211ENST00000433119 SYNJ1O43426 1573 aa33.82■■■■□ 3.01
HDAC11-211ENST00000433119 PRDM2Q13029 1718 aa33.71■■■□□ 2.99
HDAC11-211ENST00000433119 CADPSQ9ULU8 1353 aa33.71■■■□□ 2.99
HDAC11-211ENST00000433119 SOGA1O94964 1423 aa33.67■■■□□ 2.98
HDAC11-211ENST00000433119 TOP2BQ02880 1626 aa33.61■■■□□ 2.97
HDAC11-211ENST00000433119 EHMT2Q96KQ7 1210 aa33.6■■■□□ 2.97
HDAC11-211ENST00000433119 BIVM-ERCC5R4GMW8 1640 aa33.57■■■□□ 2.96
HDAC11-211ENST00000433119 RUSC2Q8N2Y8 1516 aa33.56■■■□□ 2.96
HDAC11-211ENST00000433119 DNAJC5BQ9UF47 199 aa33.54■■■□□ 2.96
HDAC11-211ENST00000433119 CUX1P39880 1505 aa33.5■■■□□ 2.95
HDAC11-211ENST00000433119 EEA1Q15075 1411 aa33.49■■■□□ 2.95
HDAC11-211ENST00000433119 NESP48681 1621 aa33.43■■■□□ 2.94
HDAC11-211ENST00000433119 CSRNP3Q8WYN3 585 aa33.4■■■□□ 2.94
HDAC11-211ENST00000433119 FANCD2Q9BXW9 1451 aa33.35■■■□□ 2.93
HDAC11-211ENST00000433119 LAMC3Q9Y6N6 1575 aa33.31■■■□□ 2.92
HDAC11-211ENST00000433119 GOLGA3Q08378 1498 aa33.1■■■□□ 2.89
HDAC11-211ENST00000433119 KIF21BO75037 1637 aa33.1■■■□□ 2.89
HDAC11-211ENST00000433119 FGD5Q6ZNL6 1462 aa33.09■■■□□ 2.89
HDAC11-211ENST00000433119 CEP164Q9UPV0 1460 aa33.09■■■□□ 2.89
HDAC11-211ENST00000433119 DNMBPQ6XZF7 1577 aa33.06■■■□□ 2.88
HDAC11-211ENST00000433119 PDS5BQ9NTI5 1447 aa33.06■■■□□ 2.88
HDAC11-211ENST00000433119 TNIKQ9UKE5 1360 aa33.06■■■□□ 2.88
HDAC11-211ENST00000433119 UBTFP17480 764 aaKnown RBP33.04■■■□□ 2.88
HDAC11-211ENST00000433119 KIF27Q86VH2 1401 aa33.02■■■□□ 2.88
HDAC11-211ENST00000433119 TOPBP1Q92547 1522 aa33.02■■■□□ 2.88
HDAC11-211ENST00000433119 KIF21AQ7Z4S6 1674 aa33■■■□□ 2.87
HDAC11-211ENST00000433119 URB2Q14146 1524 aaKnown RBP32.95■■■□□ 2.86
HDAC11-211ENST00000433119 RAPGEF2Q9Y4G8 1499 aa32.94■■■□□ 2.86
HDAC11-211ENST00000433119 CEP162Q5TB80 1403 aa32.94■■■□□ 2.86
HDAC11-211ENST00000433119 CUX2O14529 1486 aa32.93■■■□□ 2.86
HDAC11-211ENST00000433119 POLA1P09884 1462 aaPredicted RBP32.89■■■□□ 2.86
HDAC11-211ENST00000433119 PRXQ9BXM0 1461 aa32.88■■■□□ 2.85
HDAC11-211ENST00000433119 RAD54L2Q9Y4B4 1467 aa32.84■■■□□ 2.85
HDAC11-211ENST00000433119 ERICH3Q5RHP9 1530 aa32.81■■■□□ 2.84
HDAC11-211ENST00000433119 IGF1RP08069 1367 aa32.76■■■□□ 2.83
HDAC11-211ENST00000433119 ABCA10Q8WWZ4 1543 aa32.76■■■□□ 2.83
HDAC11-211ENST00000433119 PCGF6Q9BYE7 350 aa32.75■■■□□ 2.83
HDAC11-211ENST00000433119 WDR97A6NE52 1622 aa32.65■■■□□ 2.82
HDAC11-211ENST00000433119 MRC2Q9UBG0 1479 aa32.63■■■□□ 2.81
HDAC11-211ENST00000433119 CLIP1P30622 1438 aa32.62■■■□□ 2.81
HDAC11-211ENST00000433119 TRIM26Q12899 539 aaPredicted RBP32.6■■■□□ 2.81
HDAC11-211ENST00000433119 CARMIL1Q5VZK9 1371 aa32.58■■■□□ 2.81
HDAC11-211ENST00000433119 RANGAP1P46060 587 aaPredicted RBP32.54■■■□□ 2.8
HDAC11-211ENST00000433119 PPARGC1BQ86YN6 1023 aaKnown RBP32.51■■■□□ 2.8
HDAC11-211ENST00000433119 TARBP1Q13395 1621 aaKnown RBP32.51■■■□□ 2.8
HDAC11-211ENST00000433119 TDRD9Q8NDG6 1382 aaKnown RBP32.5■■■□□ 2.79
HDAC11-211ENST00000433119 ABCA5Q8WWZ7 1642 aa32.49■■■□□ 2.79
HDAC11-211ENST00000433119 ERCC6Q03468 1493 aa32.46■■■□□ 2.79
HDAC11-211ENST00000433119 WDR62O43379 1518 aa32.44■■■□□ 2.78
HDAC11-211ENST00000433119 GAPVD1Q14C86 1478 aa32.42■■■□□ 2.78
HDAC11-211ENST00000433119 CUL7Q14999 1698 aa32.41■■■□□ 2.78
HDAC11-211ENST00000433119 VPS8Q8N3P4 1428 aa32.35■■■□□ 2.77
HDAC11-211ENST00000433119 THOC2Q8NI27 1593 aaKnown RBP32.33■■■□□ 2.77
HDAC11-211ENST00000433119 ARAP1Q96P48 1450 aa32.29■■■□□ 2.76
HDAC11-211ENST00000433119 IFT140Q96RY7 1462 aa32.26■■■□□ 2.75
HDAC11-211ENST00000433119 AQRO60306 1485 aaKnown RBP eCLIP32.25■■■□□ 2.751e-6■■■■■ 29
HDAC11-211ENST00000433119 PBRM1Q86U86 1689 aa32.24■■■□□ 2.75
HDAC11-211ENST00000433119 ARHGAP35Q9NRY4 1499 aa32.23■■■□□ 2.75
HDAC11-211ENST00000433119 TTBK1Q5TCY1 1321 aaPredicted RBP32.2■■■□□ 2.74
HDAC11-211ENST00000433119 ZNF608Q9ULD9 1512 aaPredicted RBP32.18■■■□□ 2.74
HDAC11-211ENST00000433119 CTTNBP2Q8WZ74 1663 aa32.14■■■□□ 2.74
HDAC11-211ENST00000433119 GRIN2BQ13224 1484 aa32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms