RNA–Protein interactions for RNA: ENST00000487585.5

HDAC11-218, Transcript of histone deacetylase 11, humanhuman

TSL 4

Gene HDAC11, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-218ENST00000487585 NISCHQ9Y2I1 1504 aa48.32■■■■■ 5.33
HDAC11-218ENST00000487585 CCDC180Q9P1Z9 1646 aa43.29■■■■■ 4.52
HDAC11-218ENST00000487585 ABCC9O60706 1549 aa42.96■■■■■ 4.47
HDAC11-218ENST00000487585 RB1CC1Q8TDY2 1594 aa41.05■■■■■ 4.16
HDAC11-218ENST00000487585 NACADO15069 1562 aa40.86■■■■■ 4.13
HDAC11-218ENST00000487585 DCAF8L2P0C7V8 631 aa40.55■■■■■ 4.08
HDAC11-218ENST00000487585 MYO15BQ96JP2 1530 aa40.42■■■■■ 4.06
HDAC11-218ENST00000487585 UNC13AQ9UPW8 1703 aa40.11■■■■■ 4.01
HDAC11-218ENST00000487585 ZCCHC6Q5VYS8 1495 aaKnown RBP40.11■■■■■ 4.01
HDAC11-218ENST00000487585 DNAJC5BQ9UF47 199 aa40.08■■■■■ 4.01
HDAC11-218ENST00000487585 PABPN1Q86U42 306 aaKnown RBP eCLIP40■■■■□ 3.99
HDAC11-218ENST00000487585 DCAF1Q9Y4B6 1507 aa39.98■■■■□ 3.99
HDAC11-218ENST00000487585 BICRAQ9NZM4 1560 aa39.85■■■■□ 3.97
HDAC11-218ENST00000487585 SHROOM4Q9ULL8 1493 aa39.4■■■■□ 3.9
HDAC11-218ENST00000487585 SCRIBQ14160 1630 aa39.37■■■■□ 3.89
HDAC11-218ENST00000487585 CC2D2AQ9P2K1 1620 aa38.85■■■■□ 3.81
HDAC11-218ENST00000487585 EIF4G1Q04637 1599 aaKnown RBP38.85■■■■□ 3.81
HDAC11-218ENST00000487585 CECR2Q9BXF3 1484 aa38.69■■■■□ 3.78
HDAC11-218ENST00000487585 NCAPD3P42695 1498 aa37.71■■■■□ 3.63
HDAC11-218ENST00000487585 SMARCA4P51532 1647 aa37.64■■■■□ 3.62
HDAC11-218ENST00000487585 ATAD2BQ9ULI0 1458 aa37.61■■■■□ 3.61
HDAC11-218ENST00000487585 SMARCA2P51531 1590 aa37.53■■■■□ 3.6
HDAC11-218ENST00000487585 BAZ1AQ9NRL2 1556 aaPredicted RBP37.5■■■■□ 3.59
HDAC11-218ENST00000487585 HMGXB3Q12766 1538 aa37.46■■■■□ 3.59
HDAC11-218ENST00000487585 PEG3Q9GZU2 1588 aa37.32■■■■□ 3.56
HDAC11-218ENST00000487585 BAZ1BQ9UIG0 1483 aaKnown RBP37.24■■■■□ 3.55
HDAC11-218ENST00000487585 MROH2BQ7Z745 1585 aa37.21■■■■□ 3.55
HDAC11-218ENST00000487585 ERCC6Q03468 1493 aa37.07■■■■□ 3.52
HDAC11-218ENST00000487585 CUX2O14529 1486 aa36.98■■■■□ 3.51
HDAC11-218ENST00000487585 NESP48681 1621 aa36.98■■■■□ 3.51
HDAC11-218ENST00000487585 LAMC3Q9Y6N6 1575 aa36.82■■■■□ 3.48
HDAC11-218ENST00000487585 WIZO95785 1651 aa36.77■■■■□ 3.48
HDAC11-218ENST00000487585 DNAJC5Q9H3Z4 198 aa36.65■■■■□ 3.46
HDAC11-218ENST00000487585 THOC2Q8NI27 1593 aaKnown RBP36.6■■■■□ 3.45
HDAC11-218ENST00000487585 PDS5BQ9NTI5 1447 aa36.58■■■■□ 3.45
HDAC11-218ENST00000487585 CADPSQ9ULU8 1353 aa36.55■■■■□ 3.44
HDAC11-218ENST00000487585 RSF1Q96T23 1441 aaPredicted RBP36.53■■■■□ 3.44
HDAC11-218ENST00000487585 KIF21AQ7Z4S6 1674 aa36.53■■■■□ 3.44
HDAC11-218ENST00000487585 TOP2AP11388 1531 aaKnown RBP36.35■■■■□ 3.41
HDAC11-218ENST00000487585 MRC2Q9UBG0 1479 aa36.24■■■■□ 3.39
HDAC11-218ENST00000487585 CFTRP13569 1480 aa36.2■■■■□ 3.39
HDAC11-218ENST00000487585 WDR62O43379 1518 aa36.17■■■■□ 3.38
HDAC11-218ENST00000487585 CEP164Q9UPV0 1460 aa36.14■■■■□ 3.38
HDAC11-218ENST00000487585 FANCD2Q9BXW9 1451 aa36.12■■■■□ 3.37
HDAC11-218ENST00000487585 CCDC88BA6NC98 1476 aa35.92■■■■□ 3.34
HDAC11-218ENST00000487585 PRDM2Q13029 1718 aa35.87■■■■□ 3.33
HDAC11-218ENST00000487585 URB2Q14146 1524 aaKnown RBP35.82■■■■□ 3.32
HDAC11-218ENST00000487585 TOPBP1Q92547 1522 aa35.47■■■■□ 3.27
HDAC11-218ENST00000487585 ABCC8Q09428 1581 aa35.45■■■■□ 3.27
HDAC11-218ENST00000487585 IFT140Q96RY7 1462 aa35.42■■■■□ 3.26
HDAC11-218ENST00000487585 DNMBPQ6XZF7 1577 aa35.38■■■■□ 3.25
HDAC11-218ENST00000487585 ZNF608Q9ULD9 1512 aaPredicted RBP35.32■■■■□ 3.24
HDAC11-218ENST00000487585 OSCARQ8IYS5 282 aa35.29■■■■□ 3.24
HDAC11-218ENST00000487585 TARBP1Q13395 1621 aaKnown RBP35.16■■■■□ 3.22
HDAC11-218ENST00000487585 EIF4G3O43432 1585 aaKnown RBP35.15■■■■□ 3.22
HDAC11-218ENST00000487585 POLA1P09884 1462 aaPredicted RBP35.13■■■■□ 3.21
HDAC11-218ENST00000487585 TRIM41Q8WV44 630 aa35.07■■■■□ 3.2
HDAC11-218ENST00000487585 AQRO60306 1485 aaKnown RBP eCLIP35.02■■■■□ 3.21e-6■■■■■ 29
HDAC11-218ENST00000487585 SUPT5HO00267 1087 aaKnown RBP35■■■■□ 3.19
HDAC11-218ENST00000487585 RAD54L2Q9Y4B4 1467 aa34.97■■■■□ 3.19
HDAC11-218ENST00000487585 SOGA1O94964 1423 aa34.96■■■■□ 3.19
HDAC11-218ENST00000487585 CUX1P39880 1505 aa34.95■■■■□ 3.19
HDAC11-218ENST00000487585 FGD5Q6ZNL6 1462 aa34.94■■■■□ 3.18
HDAC11-218ENST00000487585 WDR97A6NE52 1622 aa34.86■■■■□ 3.17
HDAC11-218ENST00000487585 TDRD9Q8NDG6 1382 aaKnown RBP34.84■■■■□ 3.17
HDAC11-218ENST00000487585 CHD1O14646 1710 aa34.84■■■■□ 3.17
HDAC11-218ENST00000487585 RIMBP3CA6NJZ7 1639 aa34.81■■■■□ 3.16
HDAC11-218ENST00000487585 RIMBP3BA6NNM3 1639 aa34.81■■■■□ 3.16
HDAC11-218ENST00000487585 RIMBP3Q9UFD9 1639 aa34.81■■■■□ 3.16
HDAC11-218ENST00000487585 ARHGEF11O15085 1522 aa34.74■■■■□ 3.15
HDAC11-218ENST00000487585 FBLN2P98095 1184 aa34.68■■■■□ 3.14
HDAC11-218ENST00000487585 SNAPC4Q5SXM2 1469 aa34.68■■■■□ 3.14
HDAC11-218ENST00000487585 GRIN2BQ13224 1484 aa34.65■■■■□ 3.14
HDAC11-218ENST00000487585 MAGI1Q96QZ7 1491 aaPredicted RBP34.64■■■■□ 3.14
HDAC11-218ENST00000487585 ABCA10Q8WWZ4 1543 aa34.58■■■■□ 3.13
HDAC11-218ENST00000487585 GAPVD1Q14C86 1478 aa34.55■■■■□ 3.12
HDAC11-218ENST00000487585 PBRM1Q86U86 1689 aa34.52■■■■□ 3.12
HDAC11-218ENST00000487585 CHMP7Q8WUX9 453 aaPredicted RBP34.51■■■■□ 3.12
HDAC11-218ENST00000487585 ABCA5Q8WWZ7 1642 aa34.51■■■■□ 3.11
HDAC11-218ENST00000487585 SYNJ2O15056 1496 aa34.51■■■■□ 3.11
HDAC11-218ENST00000487585 BIVM-ERCC5R4GMW8 1640 aa34.48■■■■□ 3.11
HDAC11-218ENST00000487585 CLASP1Q7Z460 1538 aa34.48■■■■□ 3.11
HDAC11-218ENST00000487585 TOP2BQ02880 1626 aa34.48■■■■□ 3.11
HDAC11-218ENST00000487585 WRNQ14191 1432 aaPredicted RBP eCLIP34.47■■■■□ 3.115e-6■■■■■ 29.2
HDAC11-218ENST00000487585 SYNJ1O43426 1573 aa34.46■■■■□ 3.11
HDAC11-218ENST00000487585 ARAP1Q96P48 1450 aa34.42■■■■□ 3.1
HDAC11-218ENST00000487585 CYB5RLQ6IPT4 315 aa34.42■■■■□ 3.1
HDAC11-218ENST00000487585 ADAMTS12P58397 1594 aa34.22■■■■□ 3.07
HDAC11-218ENST00000487585 GRIN2AQ12879 1464 aa34.2■■■■□ 3.07
HDAC11-218ENST00000487585 ERICH3Q5RHP9 1530 aa34.15■■■■□ 3.06
HDAC11-218ENST00000487585 FHAD1B1AJZ9 1412 aa34.13■■■■□ 3.05
HDAC11-218ENST00000487585 NUP160Q12769 1436 aa34.1■■■■□ 3.05
HDAC11-218ENST00000487585 CEP170Q5SW79 1584 aa34.06■■■■□ 3.04
HDAC11-218ENST00000487585 TRHP20396 242 aaPredicted RBP33.93■■■■□ 3.02
HDAC11-218ENST00000487585 SHROOM2Q13796 1616 aa33.93■■■■□ 3.02
HDAC11-218ENST00000487585 ERCC6L2Q5T890 1561 aa33.92■■■■□ 3.02
HDAC11-218ENST00000487585 KIF27Q86VH2 1401 aa33.79■■■■□ 3
HDAC11-218ENST00000487585 IGF1RP08069 1367 aa33.75■■■□□ 2.99
HDAC11-218ENST00000487585 RUSC2Q8N2Y8 1516 aa33.74■■■□□ 2.99
HDAC11-218ENST00000487585 CUL7Q14999 1698 aa33.71■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms