RNA–Protein interactions for RNA: ENST00000498532.5

HDAC11-220, Transcript of histone deacetylase 11, humanhuman

TSL 4

Gene HDAC11, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-220ENST00000498532 NISCHQ9Y2I1 1504 aa43.34■■■■■ 4.53
HDAC11-220ENST00000498532 CCDC180Q9P1Z9 1646 aa38.89■■■■□ 3.82
HDAC11-220ENST00000498532 ABCC9O60706 1549 aa38.67■■■■□ 3.78
HDAC11-220ENST00000498532 RB1CC1Q8TDY2 1594 aa36.92■■■■□ 3.5
HDAC11-220ENST00000498532 NACADO15069 1562 aa36.69■■■■□ 3.46
HDAC11-220ENST00000498532 DCAF8L2P0C7V8 631 aa36.46■■■■□ 3.43
HDAC11-220ENST00000498532 MYO15BQ96JP2 1530 aa36.23■■■■□ 3.39
HDAC11-220ENST00000498532 UNC13AQ9UPW8 1703 aa36.08■■■■□ 3.37
HDAC11-220ENST00000498532 DNAJC5BQ9UF47 199 aa36.02■■■■□ 3.36
HDAC11-220ENST00000498532 ZCCHC6Q5VYS8 1495 aaKnown RBP35.99■■■■□ 3.35
HDAC11-220ENST00000498532 PABPN1Q86U42 306 aaKnown RBP eCLIP35.97■■■■□ 3.35
HDAC11-220ENST00000498532 DCAF1Q9Y4B6 1507 aa35.83■■■■□ 3.33
HDAC11-220ENST00000498532 BICRAQ9NZM4 1560 aa35.8■■■■□ 3.32
HDAC11-220ENST00000498532 SCRIBQ14160 1630 aa35.43■■■■□ 3.26
HDAC11-220ENST00000498532 SHROOM4Q9ULL8 1493 aa35.4■■■■□ 3.26
HDAC11-220ENST00000498532 CC2D2AQ9P2K1 1620 aa34.96■■■■□ 3.19
HDAC11-220ENST00000498532 EIF4G1Q04637 1599 aaKnown RBP34.94■■■■□ 3.18
HDAC11-220ENST00000498532 CECR2Q9BXF3 1484 aa34.83■■■■□ 3.17
HDAC11-220ENST00000498532 NCAPD3P42695 1498 aa33.83■■■■□ 3.01
HDAC11-220ENST00000498532 SMARCA4P51532 1647 aa33.81■■■■□ 3
HDAC11-220ENST00000498532 ATAD2BQ9ULI0 1458 aa33.76■■■□□ 2.99
HDAC11-220ENST00000498532 SMARCA2P51531 1590 aa33.72■■■□□ 2.99
HDAC11-220ENST00000498532 BAZ1AQ9NRL2 1556 aaPredicted RBP33.68■■■□□ 2.98
HDAC11-220ENST00000498532 HMGXB3Q12766 1538 aa33.65■■■□□ 2.98
HDAC11-220ENST00000498532 BAZ1BQ9UIG0 1483 aaKnown RBP33.48■■■□□ 2.95
HDAC11-220ENST00000498532 PEG3Q9GZU2 1588 aa33.47■■■□□ 2.95
HDAC11-220ENST00000498532 ERCC6Q03468 1493 aa33.42■■■□□ 2.94
HDAC11-220ENST00000498532 MROH2BQ7Z745 1585 aa33.39■■■□□ 2.94
HDAC11-220ENST00000498532 CUX2O14529 1486 aa33.28■■■□□ 2.92
HDAC11-220ENST00000498532 NESP48681 1621 aa33.25■■■□□ 2.91
HDAC11-220ENST00000498532 LAMC3Q9Y6N6 1575 aa33.09■■■□□ 2.89
HDAC11-220ENST00000498532 WIZO95785 1651 aa33.01■■■□□ 2.88
HDAC11-220ENST00000498532 DNAJC5Q9H3Z4 198 aa33■■■□□ 2.87
HDAC11-220ENST00000498532 THOC2Q8NI27 1593 aaKnown RBP32.94■■■□□ 2.86
HDAC11-220ENST00000498532 KIF21AQ7Z4S6 1674 aa32.89■■■□□ 2.86
HDAC11-220ENST00000498532 PDS5BQ9NTI5 1447 aa32.87■■■□□ 2.85
HDAC11-220ENST00000498532 CADPSQ9ULU8 1353 aa32.81■■■□□ 2.84
HDAC11-220ENST00000498532 RSF1Q96T23 1441 aaPredicted RBP32.75■■■□□ 2.83
HDAC11-220ENST00000498532 TOP2AP11388 1531 aaKnown RBP32.64■■■□□ 2.82
HDAC11-220ENST00000498532 MRC2Q9UBG0 1479 aa32.6■■■□□ 2.81
HDAC11-220ENST00000498532 WDR62O43379 1518 aa32.51■■■□□ 2.8
HDAC11-220ENST00000498532 CEP164Q9UPV0 1460 aa32.51■■■□□ 2.79
HDAC11-220ENST00000498532 CFTRP13569 1480 aa32.49■■■□□ 2.79
HDAC11-220ENST00000498532 FANCD2Q9BXW9 1451 aa32.47■■■□□ 2.79
HDAC11-220ENST00000498532 PRDM2Q13029 1718 aa32.26■■■□□ 2.75
HDAC11-220ENST00000498532 CCDC88BA6NC98 1476 aa32.21■■■□□ 2.75
HDAC11-220ENST00000498532 URB2Q14146 1524 aaKnown RBP32.18■■■□□ 2.74
HDAC11-220ENST00000498532 TOPBP1Q92547 1522 aa31.86■■■□□ 2.69
HDAC11-220ENST00000498532 IFT140Q96RY7 1462 aa31.84■■■□□ 2.69
HDAC11-220ENST00000498532 ABCC8Q09428 1581 aa31.81■■■□□ 2.68
HDAC11-220ENST00000498532 DNMBPQ6XZF7 1577 aa31.8■■■□□ 2.68
HDAC11-220ENST00000498532 ZNF608Q9ULD9 1512 aaPredicted RBP31.75■■■□□ 2.67
HDAC11-220ENST00000498532 OSCARQ8IYS5 282 aa31.73■■■□□ 2.67
HDAC11-220ENST00000498532 TRIM41Q8WV44 630 aa31.66■■■□□ 2.66
HDAC11-220ENST00000498532 EIF4G3O43432 1585 aaKnown RBP31.65■■■□□ 2.66
HDAC11-220ENST00000498532 TARBP1Q13395 1621 aaKnown RBP31.59■■■□□ 2.65
HDAC11-220ENST00000498532 POLA1P09884 1462 aaPredicted RBP31.56■■■□□ 2.64
HDAC11-220ENST00000498532 AQRO60306 1485 aaKnown RBP eCLIP31.46■■■□□ 2.631e-6■■■■■ 29
HDAC11-220ENST00000498532 RAD54L2Q9Y4B4 1467 aa31.4■■■□□ 2.62
HDAC11-220ENST00000498532 SUPT5HO00267 1087 aaKnown RBP31.4■■■□□ 2.62
HDAC11-220ENST00000498532 FGD5Q6ZNL6 1462 aa31.39■■■□□ 2.62
HDAC11-220ENST00000498532 SOGA1O94964 1423 aa31.38■■■□□ 2.61
HDAC11-220ENST00000498532 CUX1P39880 1505 aa31.38■■■□□ 2.61
HDAC11-220ENST00000498532 CHD1O14646 1710 aa31.38■■■□□ 2.61
HDAC11-220ENST00000498532 RIMBP3CA6NJZ7 1639 aa31.36■■■□□ 2.61
HDAC11-220ENST00000498532 RIMBP3BA6NNM3 1639 aa31.36■■■□□ 2.61
HDAC11-220ENST00000498532 RIMBP3Q9UFD9 1639 aa31.36■■■□□ 2.61
HDAC11-220ENST00000498532 WDR97A6NE52 1622 aa31.31■■■□□ 2.6
HDAC11-220ENST00000498532 TDRD9Q8NDG6 1382 aaKnown RBP31.3■■■□□ 2.6
HDAC11-220ENST00000498532 ARHGEF11O15085 1522 aa31.29■■■□□ 2.6
HDAC11-220ENST00000498532 FBLN2P98095 1184 aa31.24■■■□□ 2.59
HDAC11-220ENST00000498532 SNAPC4Q5SXM2 1469 aa31.2■■■□□ 2.58
HDAC11-220ENST00000498532 GRIN2BQ13224 1484 aa31.13■■■□□ 2.57
HDAC11-220ENST00000498532 MAGI1Q96QZ7 1491 aaPredicted RBP31.13■■■□□ 2.57
HDAC11-220ENST00000498532 PBRM1Q86U86 1689 aa31.06■■■□□ 2.56
HDAC11-220ENST00000498532 ABCA10Q8WWZ4 1543 aa31.03■■■□□ 2.56
HDAC11-220ENST00000498532 GAPVD1Q14C86 1478 aa31.03■■■□□ 2.56
HDAC11-220ENST00000498532 CHMP7Q8WUX9 453 aaPredicted RBP31.03■■■□□ 2.56
HDAC11-220ENST00000498532 SYNJ2O15056 1496 aa31.01■■■□□ 2.56
HDAC11-220ENST00000498532 SYNJ1O43426 1573 aa31.01■■■□□ 2.56
HDAC11-220ENST00000498532 ABCA5Q8WWZ7 1642 aa31.01■■■□□ 2.55
HDAC11-220ENST00000498532 CLASP1Q7Z460 1538 aa30.99■■■□□ 2.55
HDAC11-220ENST00000498532 CYB5RLQ6IPT4 315 aa30.98■■■□□ 2.55
HDAC11-220ENST00000498532 ARAP1Q96P48 1450 aa30.97■■■□□ 2.55
HDAC11-220ENST00000498532 BIVM-ERCC5R4GMW8 1640 aa30.95■■■□□ 2.55
HDAC11-220ENST00000498532 TOP2BQ02880 1626 aa30.95■■■□□ 2.54
HDAC11-220ENST00000498532 WRNQ14191 1432 aaPredicted RBP eCLIP30.94■■■□□ 2.545e-6■■■■■ 29.2
HDAC11-220ENST00000498532 ADAMTS12P58397 1594 aa30.77■■■□□ 2.52
HDAC11-220ENST00000498532 GRIN2AQ12879 1464 aa30.74■■■□□ 2.51
HDAC11-220ENST00000498532 ERICH3Q5RHP9 1530 aa30.67■■■□□ 2.5
HDAC11-220ENST00000498532 FHAD1B1AJZ9 1412 aa30.64■■■□□ 2.5
HDAC11-220ENST00000498532 CEP170Q5SW79 1584 aa30.62■■■□□ 2.49
HDAC11-220ENST00000498532 TRHP20396 242 aaPredicted RBP30.61■■■□□ 2.49
HDAC11-220ENST00000498532 NUP160Q12769 1436 aa30.61■■■□□ 2.49
HDAC11-220ENST00000498532 ERCC6L2Q5T890 1561 aa30.49■■■□□ 2.47
HDAC11-220ENST00000498532 SHROOM2Q13796 1616 aa30.48■■■□□ 2.47
HDAC11-220ENST00000498532 RUSC2Q8N2Y8 1516 aa30.34■■■□□ 2.45
HDAC11-220ENST00000498532 KIF27Q86VH2 1401 aa30.32■■■□□ 2.44
HDAC11-220ENST00000498532 PRG4Q92954 1404 aaPredicted RBP30.3■■■□□ 2.44
HDAC11-220ENST00000498532 CUL7Q14999 1698 aa30.29■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms