RNA–Protein interactions for RNA: ENST00000483813.5

NECAB3-209, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 1,277 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-209ENST00000483813 NISCHQ9Y2I1 1504 aa48.63■■■■■ 5.38
NECAB3-209ENST00000483813 CCDC180Q9P1Z9 1646 aa43.11■■■■■ 4.49
NECAB3-209ENST00000483813 ABCC9O60706 1549 aa42.26■■■■■ 4.36
NECAB3-209ENST00000483813 DCAF8L2P0C7V8 631 aa40.92■■■■■ 4.14
NECAB3-209ENST00000483813 RB1CC1Q8TDY2 1594 aa40.62■■■■■ 4.09
NECAB3-209ENST00000483813 NACADO15069 1562 aa40.57■■■■■ 4.09
NECAB3-209ENST00000483813 ZCCHC6Q5VYS8 1495 aaKnown RBP40.51■■■■■ 4.07
NECAB3-209ENST00000483813 MYO15BQ96JP2 1530 aa40.28■■■■■ 4.04
NECAB3-209ENST00000483813 DCAF1Q9Y4B6 1507 aa40.17■■■■■ 4.02
NECAB3-209ENST00000483813 PABPN1Q86U42 306 aaKnown RBP eCLIP39.59■■■■□ 3.936e-8■■□□□ 13.7
NECAB3-209ENST00000483813 UNC13AQ9UPW8 1703 aa39.57■■■■□ 3.92
NECAB3-209ENST00000483813 SCRIBQ14160 1630 aa39.49■■■■□ 3.91
NECAB3-209ENST00000483813 BICRAQ9NZM4 1560 aa39.29■■■■□ 3.88
NECAB3-209ENST00000483813 SHROOM4Q9ULL8 1493 aa38.89■■■■□ 3.82
NECAB3-209ENST00000483813 DNAJC5BQ9UF47 199 aa38.64■■■■□ 3.78
NECAB3-209ENST00000483813 EIF4G1Q04637 1599 aaKnown RBP38.31■■■■□ 3.72
NECAB3-209ENST00000483813 CC2D2AQ9P2K1 1620 aa38.14■■■■□ 3.7
NECAB3-209ENST00000483813 CECR2Q9BXF3 1484 aa37.93■■■■□ 3.66
NECAB3-209ENST00000483813 BAZ1AQ9NRL2 1556 aaPredicted RBP37.72■■■■□ 3.63
NECAB3-209ENST00000483813 SMARCA4P51532 1647 aa37.7■■■■□ 3.63
NECAB3-209ENST00000483813 ATAD2BQ9ULI0 1458 aa37.5■■■■□ 3.59
NECAB3-209ENST00000483813 MROH2BQ7Z745 1585 aa37.5■■■■□ 3.59
NECAB3-209ENST00000483813 SMARCA2P51531 1590 aa37.46■■■■□ 3.59
NECAB3-209ENST00000483813 NCAPD3P42695 1498 aa37.44■■■■□ 3.58
NECAB3-209ENST00000483813 BAZ1BQ9UIG0 1483 aaKnown RBP37.26■■■■□ 3.55
NECAB3-209ENST00000483813 PEG3Q9GZU2 1588 aa37.25■■■■□ 3.55
NECAB3-209ENST00000483813 HMGXB3Q12766 1538 aa37.23■■■■□ 3.55
NECAB3-209ENST00000483813 RSF1Q96T23 1441 aaPredicted RBP37.13■■■■□ 3.53
NECAB3-209ENST00000483813 WIZO95785 1651 aa37.1■■■■□ 3.53
NECAB3-209ENST00000483813 TOP2AP11388 1531 aaKnown RBP36.71■■■■□ 3.47
NECAB3-209ENST00000483813 NESP48681 1621 aa36.56■■■■□ 3.44
NECAB3-209ENST00000483813 SUPT5HO00267 1087 aaKnown RBP36.51■■■■□ 3.44
NECAB3-209ENST00000483813 ERCC6Q03468 1493 aa36.47■■■■□ 3.43
NECAB3-209ENST00000483813 LAMC3Q9Y6N6 1575 aa36.44■■■■□ 3.42
NECAB3-209ENST00000483813 CADPSQ9ULU8 1353 aa36.41■■■■□ 3.42
NECAB3-209ENST00000483813 CCDC88BA6NC98 1476 aa36.32■■■■□ 3.41
NECAB3-209ENST00000483813 PDS5BQ9NTI5 1447 aa36.28■■■■□ 3.4
NECAB3-209ENST00000483813 CFTRP13569 1480 aa36.17■■■■□ 3.38
NECAB3-209ENST00000483813 KIF21AQ7Z4S6 1674 aa36.07■■■■□ 3.36
NECAB3-209ENST00000483813 FANCD2Q9BXW9 1451 aa36■■■■□ 3.35
NECAB3-209ENST00000483813 CEP164Q9UPV0 1460 aa35.96■■■■□ 3.35
NECAB3-209ENST00000483813 CUX2O14529 1486 aa35.91■■■■□ 3.34
NECAB3-209ENST00000483813 THOC2Q8NI27 1593 aaKnown RBP35.88■■■■□ 3.33
NECAB3-209ENST00000483813 MRC2Q9UBG0 1479 aa35.86■■■■□ 3.33
NECAB3-209ENST00000483813 PRDM2Q13029 1718 aa35.8■■■■□ 3.32
NECAB3-209ENST00000483813 WDR62O43379 1518 aa35.67■■■■□ 3.3
NECAB3-209ENST00000483813 URB2Q14146 1524 aaKnown RBP35.59■■■■□ 3.29
NECAB3-209ENST00000483813 ABCC8Q09428 1581 aa35.43■■■■□ 3.26
NECAB3-209ENST00000483813 TOPBP1Q92547 1522 aa35.41■■■■□ 3.26
NECAB3-209ENST00000483813 DNMBPQ6XZF7 1577 aa35.36■■■■□ 3.25
NECAB3-209ENST00000483813 IFT140Q96RY7 1462 aa35.18■■■■□ 3.22
NECAB3-209ENST00000483813 CUX1P39880 1505 aa35.16■■■■□ 3.22
NECAB3-209ENST00000483813 POLA1P09884 1462 aaPredicted RBP35.11■■■■□ 3.21
NECAB3-209ENST00000483813 FGD5Q6ZNL6 1462 aa35.08■■■■□ 3.21
NECAB3-209ENST00000483813 SOGA1O94964 1423 aa35.06■■■■□ 3.2
NECAB3-209ENST00000483813 WRNQ14191 1432 aaPredicted RBP eCLIP35.06■■■■□ 3.2
NECAB3-209ENST00000483813 RAD54L2Q9Y4B4 1467 aa35.01■■■■□ 3.19
NECAB3-209ENST00000483813 ZNF608Q9ULD9 1512 aaPredicted RBP35■■■■□ 3.19
NECAB3-209ENST00000483813 TARBP1Q13395 1621 aaKnown RBP34.95■■■■□ 3.18
NECAB3-209ENST00000483813 SYNJ1O43426 1573 aa34.9■■■■□ 3.18
NECAB3-209ENST00000483813 TOP2BQ02880 1626 aa34.88■■■■□ 3.17
NECAB3-209ENST00000483813 AQRO60306 1485 aaKnown RBP eCLIP34.87■■■■□ 3.174e-8■■■■■ 28.5
NECAB3-209ENST00000483813 TDRD9Q8NDG6 1382 aaKnown RBP34.86■■■■□ 3.17
NECAB3-209ENST00000483813 BIVM-ERCC5R4GMW8 1640 aa34.84■■■■□ 3.17
NECAB3-209ENST00000483813 EIF4G3O43432 1585 aaKnown RBP34.83■■■■□ 3.17
NECAB3-209ENST00000483813 DNAJC5Q9H3Z4 198 aa34.74■■■■□ 3.15
NECAB3-209ENST00000483813 ABCA10Q8WWZ4 1543 aa34.69■■■■□ 3.14
NECAB3-209ENST00000483813 WDR97A6NE52 1622 aa34.66■■■■□ 3.14
NECAB3-209ENST00000483813 GAPVD1Q14C86 1478 aa34.62■■■■□ 3.13
NECAB3-209ENST00000483813 FBLN2P98095 1184 aa34.6■■■■□ 3.13
NECAB3-209ENST00000483813 GRIN2BQ13224 1484 aa34.58■■■■□ 3.13
NECAB3-209ENST00000483813 OSCARQ8IYS5 282 aa34.58■■■■□ 3.13
NECAB3-209ENST00000483813 SNAPC4Q5SXM2 1469 aa34.53■■■■□ 3.12
NECAB3-209ENST00000483813 ABCA5Q8WWZ7 1642 aa34.5■■■■□ 3.11
NECAB3-209ENST00000483813 CHMP7Q8WUX9 453 aaPredicted RBP34.46■■■■□ 3.11
NECAB3-209ENST00000483813 TRIM41Q8WV44 630 aa34.46■■■■□ 3.11
NECAB3-209ENST00000483813 MAGI1Q96QZ7 1491 aaPredicted RBP34.46■■■■□ 3.11
NECAB3-209ENST00000483813 PBRM1Q86U86 1689 aa34.45■■■■□ 3.11
NECAB3-209ENST00000483813 CHD1O14646 1710 aa34.36■■■■□ 3.09
NECAB3-209ENST00000483813 KIF27Q86VH2 1401 aa34.34■■■■□ 3.09
NECAB3-209ENST00000483813 SYNJ2O15056 1496 aa34.33■■■■□ 3.09
NECAB3-209ENST00000483813 ERICH3Q5RHP9 1530 aa34.29■■■■□ 3.08
NECAB3-209ENST00000483813 FHAD1B1AJZ9 1412 aa34.21■■■■□ 3.07
NECAB3-209ENST00000483813 ADAMTS12P58397 1594 aa34.19■■■■□ 3.06
NECAB3-209ENST00000483813 IGF1RP08069 1367 aa34.14■■■■□ 3.06
NECAB3-209ENST00000483813 GRIN2AQ12879 1464 aa34.13■■■■□ 3.05
NECAB3-209ENST00000483813 CHIC1Q5VXU3 224 aa34.02■■■■□ 3.04
NECAB3-209ENST00000483813 RUSC2Q8N2Y8 1516 aa34.02■■■■□ 3.04
NECAB3-209ENST00000483813 CUL7Q14999 1698 aa33.99■■■■□ 3.03
NECAB3-209ENST00000483813 CARMIL1Q5VZK9 1371 aa33.98■■■■□ 3.03
NECAB3-209ENST00000483813 CLASP1Q7Z460 1538 aa33.97■■■■□ 3.03
NECAB3-209ENST00000483813 NUP160Q12769 1436 aa33.92■■■■□ 3.02
NECAB3-209ENST00000483813 CEP170Q5SW79 1584 aa33.91■■■■□ 3.02
NECAB3-209ENST00000483813 ARHGEF11O15085 1522 aa33.9■■■■□ 3.02
NECAB3-209ENST00000483813 RIMBP3CA6NJZ7 1639 aa33.88■■■■□ 3.01
NECAB3-209ENST00000483813 RIMBP3BA6NNM3 1639 aa33.88■■■■□ 3.01
NECAB3-209ENST00000483813 RIMBP3Q9UFD9 1639 aa33.88■■■■□ 3.01
NECAB3-209ENST00000483813 FAM9AQ8IZU1 332 aaPredicted RBP33.8■■■■□ 3
NECAB3-209ENST00000483813 RAPGEF2Q9Y4G8 1499 aa33.77■■■■□ 3
NECAB3-209ENST00000483813 CSRNP3Q8WYN3 585 aa33.75■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms