Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 SNRPF-202ENST00000549580 757 ntTSL 25.26□□□□□ -1.572e-13■■■□□ 16.1
LARP4Q71RC2 CENPE-203ENST00000503705 3468 ntTSL 28.09□□□□□ -1.112e-6■■■□□ 16.1
LARP4Q71RC2 APEX1-205ENST00000553555 1603 ntTSL 1 (best)13.28□□□□□ -0.285e-6■■■□□ 16.1
LARP4Q71RC2 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.345e-6■■■□□ 16.1
LARP4Q71RC2 APEX1-216ENST00000557159 1803 ntTSL 212.59□□□□□ -0.395e-6■■■□□ 16.1
LARP4Q71RC2 APEX1-210ENST00000555414 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.635e-6■■■□□ 16.1
LARP4Q71RC2 APEX1-202ENST00000398030 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.635e-6■■■□□ 16.1
LARP4Q71RC2 APEX1-214ENST00000557054 888 ntTSL 5 BASIC7.2□□□□□ -1.265e-6■■■□□ 16.1
LARP4Q71RC2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.951e-7■■■□□ 16.1
LARP4Q71RC2 SSUH2-205ENST00000420394 1634 ntTSL 1 (best)20.15■□□□□ 0.821e-7■■■□□ 16.1
LARP4Q71RC2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.511e-7■■■□□ 16.1
LARP4Q71RC2 SSUH2-203ENST00000413305 1874 ntTSL 1 (best)13.32□□□□□ -0.281e-7■■■□□ 16.1
LARP4Q71RC2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.69■□□□□ 0.584e-7■■■□□ 16.1
LARP4Q71RC2 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.274e-7■■■□□ 16.1
LARP4Q71RC2 SUPT4H1-205ENST00000581166 1401 ntTSL 212.84□□□□□ -0.354e-7■■■□□ 16.1
LARP4Q71RC2 SUPT4H1-206ENST00000581204 539 ntTSL 28.07□□□□□ -1.124e-7■■■□□ 16.1
LARP4Q71RC2 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC8.05□□□□□ -1.124e-7■■■□□ 16.1
LARP4Q71RC2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.25■□□□□ 0.997e-8■■■□□ 16.1
LARP4Q71RC2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.26■□□□□ 0.517e-8■■■□□ 16.1
LARP4Q71RC2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.28■□□□□ 0.367e-8■■■□□ 16.1
LARP4Q71RC2 ASB1-203ENST00000438264 1048 ntTSL 316.68■□□□□ 0.267e-8■■■□□ 16.1
LARP4Q71RC2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.147e-8■■■□□ 16.1
LARP4Q71RC2 PRRC2A-204ENST00000462617 1015 ntTSL 514.79□□□□□ -0.047e-8■■■□□ 16.1
LARP4Q71RC2 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.067e-8■■■□□ 16.1
LARP4Q71RC2 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.08□□□□□ -0.157e-8■■■□□ 16.1
LARP4Q71RC2 ASB1-208ENST00000481566 701 ntTSL 512.88□□□□□ -0.357e-8■■■□□ 16.1
LARP4Q71RC2 FKBP9-212ENST00000490776 2699 ntTSL 2 BASIC10.87□□□□□ -0.677e-8■■■□□ 16.1
LARP4Q71RC2 PRRC2A-209ENST00000482441 719 ntTSL 210.32□□□□□ -0.767e-8■■■□□ 16.1
LARP4Q71RC2 CMIP-211ENST00000621537 4000 ntTSL 5 BASIC10.17□□□□□ -0.787e-8■■■□□ 16.1
LARP4Q71RC2 ASB1-205ENST00000468122 493 ntTSL 59.09□□□□□ -0.957e-8■■■□□ 16.1
LARP4Q71RC2 FKBP9-207ENST00000471066 591 ntTSL 48.35□□□□□ -1.077e-8■■■□□ 16.1
LARP4Q71RC2 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.071e-17■■■□□ 16.1
LARP4Q71RC2 AC046185.1-201ENST00000580553 2128 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.491e-17■■■□□ 16.1
LARP4Q71RC2 SEMA4C-205ENST00000474420 2625 ntTSL 219.07■□□□□ 0.641e-7■■■□□ 16.1
LARP4Q71RC2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.091e-7■■■□□ 16.1
LARP4Q71RC2 SEMA4C-204ENST00000467747 3371 ntTSL 214.6□□□□□ -0.071e-7■■■□□ 16.1
LARP4Q71RC2 SEMA4C-206ENST00000482925 3776 ntTSL 213.35□□□□□ -0.271e-7■■■□□ 16.1
LARP4Q71RC2 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.214e-16■■■□□ 16.1
LARP4Q71RC2 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.15■□□□□ 0.024e-8■■■□□ 16.1
LARP4Q71RC2 HLA-C-210ENST00000640219 976 ntBASIC12.57□□□□□ -0.47e-7■■■□□ 16.1
LARP4Q71RC2 RPL27A-205ENST00000529227 607 ntTSL 1 (best)16.55■□□□□ 0.242e-26■■■□□ 16.1
LARP4Q71RC2 RPL27A-207ENST00000530585 577 ntTSL 29.6□□□□□ -0.872e-26■■■□□ 16.1
LARP4Q71RC2 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.74□□□□□ -1.332e-26■■■□□ 16.1
LARP4Q71RC2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.075e-15■■■□□ 16.1
LARP4Q71RC2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.075e-15■■■□□ 16.1
LARP4Q71RC2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.26■■□□□ 1.311e-6■■■□□ 16.1
LARP4Q71RC2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.271e-6■■■□□ 16.1
LARP4Q71RC2 R3HDM4-204ENST00000589428 1704 ntTSL 320.24■□□□□ 0.831e-6■■■□□ 16.1
LARP4Q71RC2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.012e-7■■■□□ 16.1
LARP4Q71RC2 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.082e-7■■■□□ 16.1
LARP4Q71RC2 FOXRED2-202ENST00000366463 2489 ntTSL 212.61□□□□□ -0.392e-7■■■□□ 16.1
LARP4Q71RC2 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.143e-13■■■□□ 16
LARP4Q71RC2 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.233e-13■■■□□ 16
LARP4Q71RC2 YWHAQ-205ENST00000474715 709 ntTSL 35.9□□□□□ -1.463e-13■■■□□ 16
LARP4Q71RC2 TMEM208-212ENST00000567193 915 ntTSL 214.62□□□□□ -0.073e-11■■■□□ 16
LARP4Q71RC2 TMEM208-204ENST00000563168 1525 ntTSL 214.25□□□□□ -0.133e-11■■■□□ 16
LARP4Q71RC2 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.44□□□□□ -0.263e-11■■■□□ 16
LARP4Q71RC2 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.373e-11■■■□□ 16
LARP4Q71RC2 TMEM208-203ENST00000562235 775 ntTSL 212.4□□□□□ -0.423e-11■■■□□ 16
LARP4Q71RC2 TMEM208-205ENST00000563271 614 ntTSL 211.7□□□□□ -0.543e-11■■■□□ 16
LARP4Q71RC2 TMEM208-210ENST00000565201 832 ntTSL 2 BASIC11.46□□□□□ -0.573e-11■■■□□ 16
LARP4Q71RC2 TMEM208-209ENST00000564649 514 ntTSL 211.29□□□□□ -0.63e-11■■■□□ 16
LARP4Q71RC2 TMEM208-206ENST00000563426 457 ntTSL 39.46□□□□□ -0.93e-11■■■□□ 16
LARP4Q71RC2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.345e-11■■■□□ 16
LARP4Q71RC2 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.48□□□□□ -0.095e-11■■■□□ 16
LARP4Q71RC2 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.56□□□□□ -0.245e-11■■■□□ 16
LARP4Q71RC2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.831e-6■■■□□ 16
LARP4Q71RC2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.741e-6■■■□□ 16
LARP4Q71RC2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.81■□□□□ 0.441e-6■■■□□ 16
LARP4Q71RC2 NDUFB2-211ENST00000476181 660 ntTSL 1 (best)13.94□□□□□ -0.181e-6■■■□□ 16
LARP4Q71RC2 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC6.9□□□□□ -1.31e-6■■■□□ 16
LARP4Q71RC2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.43■■□□□ 1.342e-10■■■□□ 16
LARP4Q71RC2 MAP1LC3B-206ENST00000564844 3085 ntTSL 1 (best)20.51■□□□□ 0.872e-6■■■□□ 16
LARP4Q71RC2 GSE1-216ENST00000637419 2683 ntTSL 520.1■□□□□ 0.812e-6■■■□□ 16
LARP4Q71RC2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.692e-10■■■□□ 16
LARP4Q71RC2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.51■□□□□ 0.552e-10■■■□□ 16
LARP4Q71RC2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.24■□□□□ 0.352e-10■■■□□ 16
LARP4Q71RC2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.222e-10■■■□□ 16
LARP4Q71RC2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.112e-6■■■□□ 16
LARP4Q71RC2 EBP-201ENST00000276096 904 ntTSL 214.51□□□□□ -0.092e-8■■■□□ 16
LARP4Q71RC2 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.142e-8■■■□□ 16
LARP4Q71RC2 MIR126-201ENST00000362291 85 ntBASIC2.4□□□□□ -2.036e-12■■■□□ 16
LARP4Q71RC2 ARF5-204ENST00000463733 1509 ntTSL 515.51■□□□□ 0.077e-26■■■□□ 16
LARP4Q71RC2 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.37e-26■■■□□ 16
LARP4Q71RC2 PSME1-207ENST00000560420 922 ntTSL 213.37□□□□□ -0.273e-10■■■□□ 16
LARP4Q71RC2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.438e-19■■■□□ 16
LARP4Q71RC2 DDRGK1-203ENST00000470203 480 ntTSL 310.23□□□□□ -0.778e-19■■■□□ 16
LARP4Q71RC2 DDRGK1-204ENST00000496781 865 ntTSL 1 (best)9.79□□□□□ -0.848e-19■■■□□ 16
LARP4Q71RC2 HDGF-207ENST00000477306 686 ntTSL 213.13□□□□□ -0.315e-9■■■□□ 16
LARP4Q71RC2 HSBP1-204ENST00000570259 1020 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.558e-11■■■□□ 16
LARP4Q71RC2 HSBP1-201ENST00000433866 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.748e-11■■■□□ 16
LARP4Q71RC2 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.51□□□□□ -0.099e-8■■■□□ 16
LARP4Q71RC2 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.02□□□□□ -0.179e-8■■■□□ 16
LARP4Q71RC2 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.39e-8■■■□□ 16
LARP4Q71RC2 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC11.99□□□□□ -0.499e-8■■■□□ 16
LARP4Q71RC2 MIR4709-201ENST00000577272 72 ntBASIC2.11□□□□□ -2.071e-6■■■□□ 16
LARP4Q71RC2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.022e-16■■■□□ 16
LARP4Q71RC2 MT2A-204ENST00000563985 688 ntTSL 212.49□□□□□ -0.412e-16■■■□□ 16
LARP4Q71RC2 MT2A-202ENST00000561491 581 ntTSL 2 BASIC12.42□□□□□ -0.422e-16■■■□□ 16
LARP4Q71RC2 MT2A-203ENST00000562017 903 nt12.21□□□□□ -0.452e-16■■■□□ 16
Retrieved 100 of 15,922 protein–RNA pairs in 143.2 ms