RNA–Protein interactions for RNA: ENST00000477306.1

HDGF-207, Transcript of heparin binding growth factor, humanhuman

TSL 2

Gene HDGF, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-207ENST00000477306 NISCHQ9Y2I1 1504 aa36.49■■■■□ 3.43
HDGF-207ENST00000477306 ABCC9O60706 1549 aa33.01■■■□□ 2.87
HDGF-207ENST00000477306 CCDC180Q9P1Z9 1646 aa32.79■■■□□ 2.84
HDGF-207ENST00000477306 RB1CC1Q8TDY2 1594 aa31.3■■■□□ 2.6
HDGF-207ENST00000477306 DNAJC5BQ9UF47 199 aa31.09■■■□□ 2.57
HDGF-207ENST00000477306 NACADO15069 1562 aa31.04■■■□□ 2.56
HDGF-207ENST00000477306 DCAF8L2P0C7V8 631 aa30.92■■■□□ 2.54
HDGF-207ENST00000477306 PABPN1Q86U42 306 aaKnown RBP eCLIP30.71■■■□□ 2.51
HDGF-207ENST00000477306 UNC13AQ9UPW8 1703 aa30.6■■■□□ 2.49
HDGF-207ENST00000477306 MYO15BQ96JP2 1530 aa30.53■■■□□ 2.48
HDGF-207ENST00000477306 BICRAQ9NZM4 1560 aa30.41■■■□□ 2.46
HDGF-207ENST00000477306 ZCCHC6Q5VYS8 1495 aaKnown RBP30.21■■■□□ 2.43
HDGF-207ENST00000477306 DCAF1Q9Y4B6 1507 aa30.1■■■□□ 2.41
HDGF-207ENST00000477306 SHROOM4Q9ULL8 1493 aa29.94■■■□□ 2.38
HDGF-207ENST00000477306 SCRIBQ14160 1630 aa29.93■■■□□ 2.38
HDGF-207ENST00000477306 CC2D2AQ9P2K1 1620 aa29.78■■■□□ 2.36
HDGF-207ENST00000477306 CECR2Q9BXF3 1484 aa29.73■■■□□ 2.35
HDGF-207ENST00000477306 EIF4G1Q04637 1599 aaKnown RBP29.68■■■□□ 2.34
HDGF-207ENST00000477306 NCAPD3P42695 1498 aa28.66■■■□□ 2.18
HDGF-207ENST00000477306 DNAJC5Q9H3Z4 198 aa28.64■■■□□ 2.18
HDGF-207ENST00000477306 ATAD2BQ9ULI0 1458 aa28.57■■■□□ 2.16
HDGF-207ENST00000477306 SMARCA4P51532 1647 aa28.51■■■□□ 2.15
HDGF-207ENST00000477306 ERCC6Q03468 1493 aa28.5■■■□□ 2.15
HDGF-207ENST00000477306 CUX2O14529 1486 aa28.47■■■□□ 2.15
HDGF-207ENST00000477306 SMARCA2P51531 1590 aa28.47■■■□□ 2.15
HDGF-207ENST00000477306 HMGXB3Q12766 1538 aa28.44■■■□□ 2.14
HDGF-207ENST00000477306 BAZ1AQ9NRL2 1556 aaPredicted RBP28.33■■■□□ 2.13
HDGF-207ENST00000477306 NESP48681 1621 aa28.31■■■□□ 2.12
HDGF-207ENST00000477306 BAZ1BQ9UIG0 1483 aaKnown RBP28.29■■■□□ 2.12
HDGF-207ENST00000477306 PEG3Q9GZU2 1588 aa28.2■■■□□ 2.1
HDGF-207ENST00000477306 MROH2BQ7Z745 1585 aa28.13■■■□□ 2.09
HDGF-207ENST00000477306 LAMC3Q9Y6N6 1575 aa28.04■■■□□ 2.08
HDGF-207ENST00000477306 THOC2Q8NI27 1593 aaKnown RBP28.03■■■□□ 2.08
HDGF-207ENST00000477306 KIF21AQ7Z4S6 1674 aa27.92■■■□□ 2.06
HDGF-207ENST00000477306 PDS5BQ9NTI5 1447 aa27.9■■■□□ 2.06
HDGF-207ENST00000477306 CADPSQ9ULU8 1353 aa27.8■■■□□ 2.04
HDGF-207ENST00000477306 WIZO95785 1651 aa27.79■■■□□ 2.04
HDGF-207ENST00000477306 MRC2Q9UBG0 1479 aa27.68■■■□□ 2.02
HDGF-207ENST00000477306 WDR62O43379 1518 aa27.61■■■□□ 2.01
HDGF-207ENST00000477306 CEP164Q9UPV0 1460 aa27.54■■■□□ 2
HDGF-207ENST00000477306 FANCD2Q9BXW9 1451 aa27.5■■□□□ 1.99
HDGF-207ENST00000477306 RSF1Q96T23 1441 aaPredicted RBP27.48■■□□□ 1.99
HDGF-207ENST00000477306 CFTRP13569 1480 aa27.44■■□□□ 1.98
HDGF-207ENST00000477306 TOP2AP11388 1531 aaKnown RBP27.41■■□□□ 1.98
HDGF-207ENST00000477306 TRIM41Q8WV44 630 aa27.37■■□□□ 1.97
HDGF-207ENST00000477306 URB2Q14146 1524 aaKnown RBP27.28■■□□□ 1.96
HDGF-207ENST00000477306 OSCARQ8IYS5 282 aa27.16■■□□□ 1.94
HDGF-207ENST00000477306 PRDM2Q13029 1718 aa27.14■■□□□ 1.94
HDGF-207ENST00000477306 CCDC88BA6NC98 1476 aa27.12■■□□□ 1.93
HDGF-207ENST00000477306 IFT140Q96RY7 1462 aa26.99■■□□□ 1.91
HDGF-207ENST00000477306 ZNF608Q9ULD9 1512 aaPredicted RBP26.98■■□□□ 1.91
HDGF-207ENST00000477306 TOPBP1Q92547 1522 aa26.95■■□□□ 1.91
HDGF-207ENST00000477306 ABCC8Q09428 1581 aa26.85■■□□□ 1.89
HDGF-207ENST00000477306 DNMBPQ6XZF7 1577 aa26.84■■□□□ 1.89
HDGF-207ENST00000477306 RIMBP3CA6NJZ7 1639 aa26.83■■□□□ 1.89
HDGF-207ENST00000477306 RIMBP3BA6NNM3 1639 aa26.83■■□□□ 1.89
HDGF-207ENST00000477306 RIMBP3Q9UFD9 1639 aa26.83■■□□□ 1.89
HDGF-207ENST00000477306 EIF4G3O43432 1585 aaKnown RBP26.81■■□□□ 1.88
HDGF-207ENST00000477306 ARHGEF11O15085 1522 aa26.73■■□□□ 1.87
HDGF-207ENST00000477306 AQRO60306 1485 aaKnown RBP eCLIP26.72■■□□□ 1.873e-8■■■■■ 37.4
HDGF-207ENST00000477306 TARBP1Q13395 1621 aaKnown RBP26.72■■□□□ 1.87
HDGF-207ENST00000477306 POLA1P09884 1462 aaPredicted RBP26.67■■□□□ 1.86
HDGF-207ENST00000477306 CHD1O14646 1710 aa26.65■■□□□ 1.86
HDGF-207ENST00000477306 FBLN2P98095 1184 aa26.6■■□□□ 1.85
HDGF-207ENST00000477306 RAD54L2Q9Y4B4 1467 aa26.6■■□□□ 1.85
HDGF-207ENST00000477306 CYB5RLQ6IPT4 315 aa26.56■■□□□ 1.84
HDGF-207ENST00000477306 SOGA1O94964 1423 aa26.55■■□□□ 1.84
HDGF-207ENST00000477306 TDRD9Q8NDG6 1382 aaKnown RBP26.53■■□□□ 1.84
HDGF-207ENST00000477306 FGD5Q6ZNL6 1462 aa26.49■■□□□ 1.83
HDGF-207ENST00000477306 ARAP1Q96P48 1450 aa26.46■■□□□ 1.83
HDGF-207ENST00000477306 CUX1P39880 1505 aa26.44■■□□□ 1.82
HDGF-207ENST00000477306 SNAPC4Q5SXM2 1469 aa26.43■■□□□ 1.82
HDGF-207ENST00000477306 WDR97A6NE52 1622 aa26.4■■□□□ 1.82
HDGF-207ENST00000477306 CHMP7Q8WUX9 453 aaPredicted RBP26.35■■□□□ 1.81
HDGF-207ENST00000477306 MAGI1Q96QZ7 1491 aaPredicted RBP26.34■■□□□ 1.81
HDGF-207ENST00000477306 TRHP20396 242 aaPredicted RBP26.33■■□□□ 1.81
HDGF-207ENST00000477306 GRIN2BQ13224 1484 aa26.33■■□□□ 1.81
HDGF-207ENST00000477306 CLASP1Q7Z460 1538 aa26.33■■□□□ 1.81
HDGF-207ENST00000477306 SYNJ1O43426 1573 aa26.29■■□□□ 1.8
HDGF-207ENST00000477306 SYNJ2O15056 1496 aa26.26■■□□□ 1.79
HDGF-207ENST00000477306 GAPVD1Q14C86 1478 aa26.22■■□□□ 1.79
HDGF-207ENST00000477306 PBRM1Q86U86 1689 aa26.22■■□□□ 1.79
HDGF-207ENST00000477306 SUPT5HO00267 1087 aaKnown RBP26.2■■□□□ 1.78
HDGF-207ENST00000477306 ABCA10Q8WWZ4 1543 aa26.17■■□□□ 1.78
HDGF-207ENST00000477306 ABCA5Q8WWZ7 1642 aa26.14■■□□□ 1.78
HDGF-207ENST00000477306 WRNQ14191 1432 aaPredicted RBP eCLIP26.03■■□□□ 1.76
HDGF-207ENST00000477306 GRIN2AQ12879 1464 aa25.99■■□□□ 1.75
HDGF-207ENST00000477306 ADAMTS12P58397 1594 aa25.96■■□□□ 1.75
HDGF-207ENST00000477306 TOP2BQ02880 1626 aa25.96■■□□□ 1.75
HDGF-207ENST00000477306 BIVM-ERCC5R4GMW8 1640 aa25.96■■□□□ 1.75
HDGF-207ENST00000477306 ERCC6L2Q5T890 1561 aa25.93■■□□□ 1.74
HDGF-207ENST00000477306 CEP170Q5SW79 1584 aa25.91■■□□□ 1.74
HDGF-207ENST00000477306 NUP160Q12769 1436 aa25.9■■□□□ 1.74
HDGF-207ENST00000477306 FHAD1B1AJZ9 1412 aa25.88■■□□□ 1.73
HDGF-207ENST00000477306 ERICH3Q5RHP9 1530 aa25.83■■□□□ 1.72
HDGF-207ENST00000477306 SHROOM2Q13796 1616 aa25.8■■□□□ 1.72
HDGF-207ENST00000477306 PRG4Q92954 1404 aaPredicted RBP25.69■■□□□ 1.7
HDGF-207ENST00000477306 AEBP2Q6ZN18 517 aaPredicted RBP25.67■■□□□ 1.7
HDGF-207ENST00000477306 JPH4Q96JJ6 628 aa25.65■■□□□ 1.7
HDGF-207ENST00000477306 RUSC2Q8N2Y8 1516 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms