RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 NISCHQ9Y2I1 1504 aa24.77■■□□□ 1.56
HMGA2-204ENST00000403681 SUPT5HO00267 1087 aaKnown RBP23.33■■□□□ 1.33
HMGA2-204ENST00000403681 SHROOM4Q9ULL8 1493 aa23.09■■□□□ 1.29
HMGA2-204ENST00000403681 DCAF8L2P0C7V8 631 aa22.95■■□□□ 1.26
HMGA2-204ENST00000403681 PCGF6Q9BYE7 350 aa22.74■■□□□ 1.23
HMGA2-204ENST00000403681 HRCP23327 699 aa22.55■■□□□ 1.2
HMGA2-204ENST00000403681 PELP1Q8IZL8 1130 aaKnown RBP22.23■■□□□ 1.15
HMGA2-204ENST00000403681 PPARGC1BQ86YN6 1023 aaKnown RBP22.12■■□□□ 1.13
HMGA2-204ENST00000403681 CHIC1Q5VXU3 224 aa22.02■■□□□ 1.12
HMGA2-204ENST00000403681 ZEB1P37275 1124 aaPredicted RBP21.99■■□□□ 1.11
HMGA2-204ENST00000403681 EHMT2Q96KQ7 1210 aa21.96■■□□□ 1.11
HMGA2-204ENST00000403681 TRIM26Q12899 539 aaPredicted RBP21.84■■□□□ 1.09
HMGA2-204ENST00000403681 FAM9AQ8IZU1 332 aaPredicted RBP21.77■■□□□ 1.08
HMGA2-204ENST00000403681 LOC105371045A0A1W2PR82 267 aa21.76■■□□□ 1.07
HMGA2-204ENST00000403681 CENPBP07199 599 aaPredicted RBP21.63■■□□□ 1.05
HMGA2-204ENST00000403681 MYT1Q01538 1121 aa21.55■■□□□ 1.04
HMGA2-204ENST00000403681 TRIM41Q8WV44 630 aa21.55■■□□□ 1.04
HMGA2-204ENST00000403681 CCER1Q8TC90 406 aaPredicted RBP21.51■■□□□ 1.03
HMGA2-204ENST00000403681 TTBK1Q5TCY1 1321 aaPredicted RBP21.36■■□□□ 1.01
HMGA2-204ENST00000403681 MYO15BQ96JP2 1530 aa21.22■□□□□ 0.99
HMGA2-204ENST00000403681 YTHDC1Q96MU7 727 aaKnown RBP21.18■□□□□ 0.98
HMGA2-204ENST00000403681 DCAF1Q9Y4B6 1507 aa21.16■□□□□ 0.98
HMGA2-204ENST00000403681 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.06■□□□□ 0.96
HMGA2-204ENST00000403681 SCAF1Q9H7N4 1312 aaKnown RBP21.04■□□□□ 0.96
HMGA2-204ENST00000403681 DIEXFQ68CQ4 756 aaKnown RBP21.04■□□□□ 0.96
HMGA2-204ENST00000403681 GTF3C3Q9Y5Q9 886 aa21.03■□□□□ 0.96
HMGA2-204ENST00000403681 ACIN1Q9UKV3 1341 aaKnown RBP20.99■□□□□ 0.95
HMGA2-204ENST00000403681 APLP2Q06481 763 aa20.97■□□□□ 0.95
HMGA2-204ENST00000403681 ZCCHC6Q5VYS8 1495 aaKnown RBP20.83■□□□□ 0.93
HMGA2-204ENST00000403681 UBTFP17480 764 aaKnown RBP20.81■□□□□ 0.92
HMGA2-204ENST00000403681 NEUROD1Q13562 356 aa20.77■□□□□ 0.92
HMGA2-204ENST00000403681 CCDC180Q9P1Z9 1646 aa20.7■□□□□ 0.9
HMGA2-204ENST00000403681 RANGAP1P46060 587 aaPredicted RBP20.63■□□□□ 0.89
HMGA2-204ENST00000403681 HNRNPUL2Q1KMD3 747 aaKnown RBP20.59■□□□□ 0.89
HMGA2-204ENST00000403681 ZNF316A6NFI3 1004 aaPredicted RBP20.56■□□□□ 0.88
HMGA2-204ENST00000403681 ABCC9O60706 1549 aa20.49■□□□□ 0.87
HMGA2-204ENST00000403681 NEFLP07196 543 aa20.44■□□□□ 0.86
HMGA2-204ENST00000403681 ERICH6Q7L0X2 663 aa20.44■□□□□ 0.86
HMGA2-204ENST00000403681 MIER1Q8N108 512 aa20.18■□□□□ 0.82
HMGA2-204ENST00000403681 ITGAEP38570 1179 aa20.14■□□□□ 0.81
HMGA2-204ENST00000403681 BCANQ96GW7 911 aa20.13■□□□□ 0.81
HMGA2-204ENST00000403681 SCRIBQ14160 1630 aa20.08■□□□□ 0.8
HMGA2-204ENST00000403681 RSF1Q96T23 1441 aaPredicted RBP20.06■□□□□ 0.8
HMGA2-204ENST00000403681 CLSPNQ9HAW4 1339 aa20.05■□□□□ 0.8
HMGA2-204ENST00000403681 CSRNP3Q8WYN3 585 aa20.05■□□□□ 0.8
HMGA2-204ENST00000403681 ATP1B4Q9UN42 357 aaPredicted RBP20■□□□□ 0.79
HMGA2-204ENST00000403681 PABPN1Q86U42 306 aaKnown RBP eCLIP19.9■□□□□ 0.78
HMGA2-204ENST00000403681 FKBP8Q14318 412 aa19.82■□□□□ 0.76
HMGA2-204ENST00000403681 CEP162Q5TB80 1403 aa19.81■□□□□ 0.76
HMGA2-204ENST00000403681 ANP32EQ9BTT0 268 aa19.79■□□□□ 0.76
HMGA2-204ENST00000403681 SUPT16HQ9Y5B9 1047 aaKnown RBP19.74■□□□□ 0.75
HMGA2-204ENST00000403681 ANP32CO43423 234 aa19.73■□□□□ 0.75
HMGA2-204ENST00000403681 RB1CC1Q8TDY2 1594 aa19.72■□□□□ 0.75
HMGA2-204ENST00000403681 CDK11AQ9UQ88 783 aaPredicted RBP19.71■□□□□ 0.75
HMGA2-204ENST00000403681 TNIKQ9UKE5 1360 aa19.66■□□□□ 0.74
HMGA2-204ENST00000403681 FAM50AQ14320 339 aaKnown RBP19.64■□□□□ 0.73
HMGA2-204ENST00000403681 DDX10Q13206 875 aaKnown RBP19.63■□□□□ 0.73
HMGA2-204ENST00000403681 NACADO15069 1562 aa19.56■□□□□ 0.72
HMGA2-204ENST00000403681 CLIP1P30622 1438 aa19.56■□□□□ 0.72
HMGA2-204ENST00000403681 TRIM52Q96A61 297 aa19.55■□□□□ 0.72
HMGA2-204ENST00000403681 RTL5Q5HYW3 569 aaPredicted RBP19.55■□□□□ 0.72
HMGA2-204ENST00000403681 BCL11AQ9H165 835 aa19.54■□□□□ 0.72
HMGA2-204ENST00000403681 CECR2Q9BXF3 1484 aa19.53■□□□□ 0.72
HMGA2-204ENST00000403681 EEA1Q15075 1411 aa19.53■□□□□ 0.72
HMGA2-204ENST00000403681 GOLGA3Q08378 1498 aa19.51■□□□□ 0.71
HMGA2-204ENST00000403681 TSHZ2Q9NRE2 1034 aa19.51■□□□□ 0.71
HMGA2-204ENST00000403681 CNGB1Q14028 1251 aaPredicted RBP19.49■□□□□ 0.71
HMGA2-204ENST00000403681 SOGA1O94964 1423 aa19.44■□□□□ 0.7
HMGA2-204ENST00000403681 POLR3GLQ9BT43 218 aa19.44■□□□□ 0.7
HMGA2-204ENST00000403681 HNRNPUQ00839 825 aaKnown RBP eCLIP19.41■□□□□ 0.76e-6■□□□□ 8.3
HMGA2-204ENST00000403681 WRNQ14191 1432 aaPredicted RBP eCLIP19.4■□□□□ 0.7
HMGA2-204ENST00000403681 HIRIP3Q9BW71 556 aaPredicted RBP19.37■□□□□ 0.69
HMGA2-204ENST00000403681 MYT1LQ9UL68 1186 aa19.34■□□□□ 0.69
HMGA2-204ENST00000403681 CCDC88BA6NC98 1476 aa19.34■□□□□ 0.69
HMGA2-204ENST00000403681 MROH2BQ7Z745 1585 aa19.34■□□□□ 0.69
HMGA2-204ENST00000403681 IRX6P78412 446 aaPredicted RBP19.33■□□□□ 0.69
HMGA2-204ENST00000403681 RBM19Q9Y4C8 960 aaKnown RBP19.33■□□□□ 0.68
HMGA2-204ENST00000403681 DAXXQ9UER7 740 aaPredicted RBP19.31■□□□□ 0.68
HMGA2-204ENST00000403681 CEP164Q9UPV0 1460 aa19.3■□□□□ 0.68
HMGA2-204ENST00000403681 ABCC8Q09428 1581 aa19.27■□□□□ 0.68
HMGA2-204ENST00000403681 TONSLQ96HA7 1378 aa19.25■□□□□ 0.67
HMGA2-204ENST00000403681 ANP32AP39687 249 aaKnown RBP19.25■□□□□ 0.67
HMGA2-204ENST00000403681 NBR1Q14596 966 aa19.23■□□□□ 0.67
HMGA2-204ENST00000403681 P3H3Q8IVL6 736 aa19.23■□□□□ 0.67
HMGA2-204ENST00000403681 VPS8Q8N3P4 1428 aa19.21■□□□□ 0.67
HMGA2-204ENST00000403681 FAM9BQ8IZU0 186 aa19.18■□□□□ 0.66
HMGA2-204ENST00000403681 KCNH8Q96L42 1107 aa19.16■□□□□ 0.66
HMGA2-204ENST00000403681 SIN3AQ96ST3 1273 aa19.15■□□□□ 0.66
HMGA2-204ENST00000403681 BAZ1AQ9NRL2 1556 aaPredicted RBP19.15■□□□□ 0.66
HMGA2-204ENST00000403681 WIZO95785 1651 aa19.13■□□□□ 0.65
HMGA2-204ENST00000403681 NPM2Q86SE8 214 aaKnown RBP19.09■□□□□ 0.65
HMGA2-204ENST00000403681 DHX57Q6P158 1386 aaKnown RBP19.09■□□□□ 0.65
HMGA2-204ENST00000403681 KANK4Q5T7N3 995 aaPredicted RBP19.08■□□□□ 0.65
HMGA2-204ENST00000403681 CCNB3Q8WWL7 1395 aa19.07■□□□□ 0.64
HMGA2-204ENST00000403681 ZBTB47Q9UFB7 747 aaPredicted RBP19.07■□□□□ 0.64
HMGA2-204ENST00000403681 RUSC2Q8N2Y8 1516 aa19.06■□□□□ 0.64
HMGA2-204ENST00000403681 CCER2I3L3R5 266 aa19.06■□□□□ 0.64
HMGA2-204ENST00000403681 CCDC136Q96JN2 1154 aa19.05■□□□□ 0.64
HMGA2-204ENST00000403681 MRS2Q9HD23 443 aa19.05■□□□□ 0.64
HMGA2-204ENST00000403681 PPP4R2Q9NY27 417 aa19.02■□□□□ 0.64
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