RNA–Protein interactions for RNA: ENST00000398030.8

APEX1-202, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APEX1, Length 1,387 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-202ENST00000398030 NISCHQ9Y2I1 1504 aa26.79■■□□□ 1.88
APEX1-202ENST00000398030 CCDC180Q9P1Z9 1646 aa23.59■■□□□ 1.37
APEX1-202ENST00000398030 ABCC9O60706 1549 aa22.54■■□□□ 1.2
APEX1-202ENST00000398030 ZCCHC6Q5VYS8 1495 aaKnown RBP22.45■■□□□ 1.18
APEX1-202ENST00000398030 DCAF8L2P0C7V8 631 aa22.29■■□□□ 1.16
APEX1-202ENST00000398030 DCAF1Q9Y4B6 1507 aa22.24■■□□□ 1.15
APEX1-202ENST00000398030 MYO15BQ96JP2 1530 aa22.15■■□□□ 1.14
APEX1-202ENST00000398030 NACADO15069 1562 aa22.1■■□□□ 1.13
APEX1-202ENST00000398030 RB1CC1Q8TDY2 1594 aa22.01■■□□□ 1.11
APEX1-202ENST00000398030 SCRIBQ14160 1630 aa21.56■■□□□ 1.04
APEX1-202ENST00000398030 SHROOM4Q9ULL8 1493 aa21.53■■□□□ 1.04
APEX1-202ENST00000398030 UNC13AQ9UPW8 1703 aa21.23■□□□□ 0.99
APEX1-202ENST00000398030 PABPN1Q86U42 306 aaKnown RBP eCLIP21.15■□□□□ 0.98
APEX1-202ENST00000398030 BICRAQ9NZM4 1560 aa21.12■□□□□ 0.97
APEX1-202ENST00000398030 BAZ1AQ9NRL2 1556 aaPredicted RBP20.81■□□□□ 0.92
APEX1-202ENST00000398030 CECR2Q9BXF3 1484 aa20.73■□□□□ 0.91
APEX1-202ENST00000398030 SMARCA4P51532 1647 aa20.66■□□□□ 0.9
APEX1-202ENST00000398030 EIF4G1Q04637 1599 aaKnown RBP20.63■□□□□ 0.89
APEX1-202ENST00000398030 RSF1Q96T23 1441 aaPredicted RBP20.62■□□□□ 0.89
APEX1-202ENST00000398030 SUPT5HO00267 1087 aaKnown RBP20.61■□□□□ 0.89
APEX1-202ENST00000398030 MROH2BQ7Z745 1585 aa20.61■□□□□ 0.89
APEX1-202ENST00000398030 SMARCA2P51531 1590 aa20.52■□□□□ 0.88
APEX1-202ENST00000398030 PEG3Q9GZU2 1588 aa20.45■□□□□ 0.86
APEX1-202ENST00000398030 DNAJC5BQ9UF47 199 aa20.44■□□□□ 0.86
APEX1-202ENST00000398030 ATAD2BQ9ULI0 1458 aa20.43■□□□□ 0.86
APEX1-202ENST00000398030 AEBP2Q6ZN18 517 aaPredicted RBP20.42■□□□□ 0.86
APEX1-202ENST00000398030 CC2D2AQ9P2K1 1620 aa20.38■□□□□ 0.85
APEX1-202ENST00000398030 WIZO95785 1651 aa20.38■□□□□ 0.85
APEX1-202ENST00000398030 BAZ1BQ9UIG0 1483 aaKnown RBP20.38■□□□□ 0.85
APEX1-202ENST00000398030 NCAPD3P42695 1498 aa20.35■□□□□ 0.85
APEX1-202ENST00000398030 HMGXB3Q12766 1538 aa20.33■□□□□ 0.84
APEX1-202ENST00000398030 TOP2AP11388 1531 aaKnown RBP20.32■□□□□ 0.84
APEX1-202ENST00000398030 CCDC88BA6NC98 1476 aa20.02■□□□□ 0.8
APEX1-202ENST00000398030 CADPSQ9ULU8 1353 aa19.83■□□□□ 0.76
APEX1-202ENST00000398030 CFTRP13569 1480 aa19.79■□□□□ 0.76
APEX1-202ENST00000398030 LAMC3Q9Y6N6 1575 aa19.76■□□□□ 0.75
APEX1-202ENST00000398030 PDS5BQ9NTI5 1447 aa19.69■□□□□ 0.74
APEX1-202ENST00000398030 PRDM2Q13029 1718 aa19.59■□□□□ 0.73
APEX1-202ENST00000398030 NESP48681 1621 aa19.59■□□□□ 0.73
APEX1-202ENST00000398030 FANCD2Q9BXW9 1451 aa19.59■□□□□ 0.73
APEX1-202ENST00000398030 CEP164Q9UPV0 1460 aa19.56■□□□□ 0.72
APEX1-202ENST00000398030 ERCC6Q03468 1493 aa19.53■□□□□ 0.72
APEX1-202ENST00000398030 WRNQ14191 1432 aaPredicted RBP eCLIP19.52■□□□□ 0.725e-6■■■■■ 29.2
APEX1-202ENST00000398030 TRIM41Q8WV44 630 aa19.51■□□□□ 0.71
APEX1-202ENST00000398030 CHIC1Q5VXU3 224 aa19.49■□□□□ 0.71
APEX1-202ENST00000398030 ABCC8Q09428 1581 aa19.46■□□□□ 0.71
APEX1-202ENST00000398030 MRC2Q9UBG0 1479 aa19.4■□□□□ 0.7
APEX1-202ENST00000398030 KIF21AQ7Z4S6 1674 aa19.36■□□□□ 0.69
APEX1-202ENST00000398030 DNMBPQ6XZF7 1577 aa19.36■□□□□ 0.69
APEX1-202ENST00000398030 TOP2BQ02880 1626 aa19.34■□□□□ 0.69
APEX1-202ENST00000398030 CUX1P39880 1505 aa19.31■□□□□ 0.68
APEX1-202ENST00000398030 TOPBP1Q92547 1522 aa19.3■□□□□ 0.68
APEX1-202ENST00000398030 BIVM-ERCC5R4GMW8 1640 aa19.3■□□□□ 0.68
APEX1-202ENST00000398030 SYNJ1O43426 1573 aa19.3■□□□□ 0.68
APEX1-202ENST00000398030 URB2Q14146 1524 aaKnown RBP19.27■□□□□ 0.67
APEX1-202ENST00000398030 WDR62O43379 1518 aa19.25■□□□□ 0.67
APEX1-202ENST00000398030 FGD5Q6ZNL6 1462 aa19.23■□□□□ 0.67
APEX1-202ENST00000398030 THOC2Q8NI27 1593 aaKnown RBP19.19■□□□□ 0.66
APEX1-202ENST00000398030 EEA1Q15075 1411 aa19.18■□□□□ 0.66
APEX1-202ENST00000398030 POLA1P09884 1462 aaPredicted RBP19.17■□□□□ 0.66
APEX1-202ENST00000398030 SOGA1O94964 1423 aa19.17■□□□□ 0.66
APEX1-202ENST00000398030 IFT140Q96RY7 1462 aa19.13■□□□□ 0.65
APEX1-202ENST00000398030 DNAJC5Q9H3Z4 198 aa19.12■□□□□ 0.65
APEX1-202ENST00000398030 KIF27Q86VH2 1401 aa19.12■□□□□ 0.65
APEX1-202ENST00000398030 ABCA10Q8WWZ4 1543 aa19.08■□□□□ 0.64
APEX1-202ENST00000398030 CUX2O14529 1486 aa19.08■□□□□ 0.64
APEX1-202ENST00000398030 RAD54L2Q9Y4B4 1467 aa19.04■□□□□ 0.64
APEX1-202ENST00000398030 FAM9AQ8IZU1 332 aaPredicted RBP19.02■□□□□ 0.64
APEX1-202ENST00000398030 WDR97A6NE52 1622 aa19.02■□□□□ 0.64
APEX1-202ENST00000398030 CSRNP3Q8WYN3 585 aa18.98■□□□□ 0.63
APEX1-202ENST00000398030 TARBP1Q13395 1621 aaKnown RBP18.97■□□□□ 0.63
APEX1-202ENST00000398030 GAPVD1Q14C86 1478 aa18.95■□□□□ 0.62
APEX1-202ENST00000398030 TDRD9Q8NDG6 1382 aaKnown RBP18.94■□□□□ 0.62
APEX1-202ENST00000398030 GRIN2BQ13224 1484 aa18.9■□□□□ 0.62
APEX1-202ENST00000398030 ABCA5Q8WWZ7 1642 aa18.89■□□□□ 0.61
APEX1-202ENST00000398030 ERICH3Q5RHP9 1530 aa18.89■□□□□ 0.61
APEX1-202ENST00000398030 RUSC2Q8N2Y8 1516 aa18.88■□□□□ 0.61
APEX1-202ENST00000398030 AQRO60306 1485 aaKnown RBP eCLIP18.85■□□□□ 0.613e-9■■■□□ 17.9
APEX1-202ENST00000398030 EIF4G3O43432 1585 aaKnown RBP18.85■□□□□ 0.61
APEX1-202ENST00000398030 ZNF608Q9ULD9 1512 aaPredicted RBP18.85■□□□□ 0.61
APEX1-202ENST00000398030 IGF1RP08069 1367 aa18.84■□□□□ 0.61
APEX1-202ENST00000398030 CUL7Q14999 1698 aa18.82■□□□□ 0.6
APEX1-202ENST00000398030 CARMIL1Q5VZK9 1371 aa18.82■□□□□ 0.6
APEX1-202ENST00000398030 GOLGA3Q08378 1498 aa18.82■□□□□ 0.6
APEX1-202ENST00000398030 KIF21BO75037 1637 aa18.79■□□□□ 0.6
APEX1-202ENST00000398030 MAGI1Q96QZ7 1491 aaPredicted RBP18.79■□□□□ 0.6
APEX1-202ENST00000398030 FHAD1B1AJZ9 1412 aa18.78■□□□□ 0.6
APEX1-202ENST00000398030 PRXQ9BXM0 1461 aa18.78■□□□□ 0.6
APEX1-202ENST00000398030 RAPGEF2Q9Y4G8 1499 aa18.78■□□□□ 0.6
APEX1-202ENST00000398030 PBRM1Q86U86 1689 aa18.77■□□□□ 0.6
APEX1-202ENST00000398030 UBTFP17480 764 aaKnown RBP18.75■□□□□ 0.59
APEX1-202ENST00000398030 SNAPC4Q5SXM2 1469 aa18.75■□□□□ 0.59
APEX1-202ENST00000398030 CHMP7Q8WUX9 453 aaPredicted RBP18.71■□□□□ 0.59
APEX1-202ENST00000398030 ADAMTS12P58397 1594 aa18.71■□□□□ 0.59
APEX1-202ENST00000398030 EHMT2Q96KQ7 1210 aa18.7■□□□□ 0.58
APEX1-202ENST00000398030 SYNJ2O15056 1496 aa18.69■□□□□ 0.58
APEX1-202ENST00000398030 FBLN2P98095 1184 aa18.67■□□□□ 0.58
APEX1-202ENST00000398030 TNIKQ9UKE5 1360 aa18.65■□□□□ 0.58
APEX1-202ENST00000398030 LOC105371045A0A1W2PR82 267 aa18.64■□□□□ 0.57
APEX1-202ENST00000398030 GRIN2AQ12879 1464 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms