RNA–Protein interactions for RNA: ENST00000581540.5

SUPT4H1-207, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-207ENST00000581540 CHIC1Q5VXU3 224 aa23.09■■□□□ 1.29
SUPT4H1-207ENST00000581540 AEBP2Q6ZN18 517 aaPredicted RBP22.18■■□□□ 1.14
SUPT4H1-207ENST00000581540 PHF23Q9BUL5 403 aaPredicted RBP20.37■□□□□ 0.85
SUPT4H1-207ENST00000581540 PLPPR3Q6T4P5 718 aa19.44■□□□□ 0.7
SUPT4H1-207ENST00000581540 EHMT2Q96KQ7 1210 aa18.84■□□□□ 0.61
SUPT4H1-207ENST00000581540 SENP3Q9H4L4 574 aaPredicted RBP18.76■□□□□ 0.59
SUPT4H1-207ENST00000581540 KCNA4P22459 653 aa18.35■□□□□ 0.53
SUPT4H1-207ENST00000581540 ADRA2BP18089 450 aa17.98■□□□□ 0.47
SUPT4H1-207ENST00000581540 CSRNP3Q8WYN3 585 aa17.92■□□□□ 0.46
SUPT4H1-207ENST00000581540 SLC24A1O60721 1099 aa17.8■□□□□ 0.44
SUPT4H1-207ENST00000581540 SLC4A1APQ9BWU0 796 aaKnown RBP17.8■□□□□ 0.44
SUPT4H1-207ENST00000581540 PPP6R1Q9UPN7 881 aa17.5■□□□□ 0.39
SUPT4H1-207ENST00000581540 NCBP3Q53F19 620 aaKnown RBP17.3■□□□□ 0.36
SUPT4H1-207ENST00000581540 AMER1Q5JTC6 1135 aaPredicted RBP17.25■□□□□ 0.35
SUPT4H1-207ENST00000581540 PPP4R3CPQ6ZMV5 832 aa17.23■□□□□ 0.35
SUPT4H1-207ENST00000581540 FOXD1Q16676 465 aa17.13■□□□□ 0.33
SUPT4H1-207ENST00000581540 RTN4Q9NQC3 1192 aaKnown RBP17.13■□□□□ 0.33
SUPT4H1-207ENST00000581540 NPM3O75607 178 aaKnown RBP16.92■□□□□ 0.3
SUPT4H1-207ENST00000581540 ZBTB22O15209 634 aa16.87■□□□□ 0.29
SUPT4H1-207ENST00000581540 PIAS4Q8N2W9 510 aaPredicted RBP16.58■□□□□ 0.24
SUPT4H1-207ENST00000581540 FOXD4L1Q9NU39 408 aa16.58■□□□□ 0.24
SUPT4H1-207ENST00000581540 CNKSR2Q8WXI2 1034 aa16.5■□□□□ 0.23
SUPT4H1-207ENST00000581540 DNAJC5BQ9UF47 199 aa16.29■□□□□ 0.2
SUPT4H1-207ENST00000581540 SCAF1Q9H7N4 1312 aaKnown RBP16.28■□□□□ 0.2
SUPT4H1-207ENST00000581540 FKBP8Q14318 412 aa16.19■□□□□ 0.18
SUPT4H1-207ENST00000581540 ATXN8OSP0DMR3 200 aa15.93■□□□□ 0.14
SUPT4H1-207ENST00000581540 RNF216Q9NWF9 866 aaPredicted RBP15.84■□□□□ 0.13
SUPT4H1-207ENST00000581540 PLCB2Q00722 1185 aa15.78■□□□□ 0.12
SUPT4H1-207ENST00000581540 BCANQ96GW7 911 aa15.72■□□□□ 0.11
SUPT4H1-207ENST00000581540 MYCNP04198 464 aaPredicted RBP15.68■□□□□ 0.1
SUPT4H1-207ENST00000581540 SLC4A2P04920 1241 aa15.59■□□□□ 0.09
SUPT4H1-207ENST00000581540 HAP1P54257 671 aaPredicted RBP15.56■□□□□ 0.08
SUPT4H1-207ENST00000581540 NISCHQ9Y2I1 1504 aa15.56■□□□□ 0.08
SUPT4H1-207ENST00000581540 MAPK8IP2Q13387 824 aaPredicted RBP15.52■□□□□ 0.08
SUPT4H1-207ENST00000581540 TAOK2Q9UL54 1235 aa15.51■□□□□ 0.07
SUPT4H1-207ENST00000581540 PRKCSHP14314 528 aaPredicted RBP15.49■□□□□ 0.07
SUPT4H1-207ENST00000581540 MSH5O43196 834 aa15.41■□□□□ 0.06
SUPT4H1-207ENST00000581540 VSIG10Q8N0Z9 540 aa15.39■□□□□ 0.05
SUPT4H1-207ENST00000581540 HOXD11P31277 338 aaPredicted RBP15.38■□□□□ 0.05
SUPT4H1-207ENST00000581540 FBXO3Q9UK99 471 aa15.35■□□□□ 0.05
SUPT4H1-207ENST00000581540 DCAF8L2P0C7V8 631 aa15.27■□□□□ 0.04
SUPT4H1-207ENST00000581540 TPRNQ4KMQ1 711 aa15.24■□□□□ 0.03
SUPT4H1-207ENST00000581540 DMRT2Q9Y5R5 561 aa15.16■□□□□ 0.02
SUPT4H1-207ENST00000581540 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.03■□□□□ -0
SUPT4H1-207ENST00000581540 VASPP50552 380 aaPredicted RBP15.01□□□□□ -0.01
SUPT4H1-207ENST00000581540 ATF5Q9Y2D1 282 aaPredicted RBP15.01□□□□□ -0.01
SUPT4H1-207ENST00000581540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.99□□□□□ -0.01
SUPT4H1-207ENST00000581540 HNRNPUL2Q1KMD3 747 aaKnown RBP14.99□□□□□ -0.01
SUPT4H1-207ENST00000581540 SAMD1Q6SPF0 538 aaPredicted RBP14.97□□□□□ -0.01
SUPT4H1-207ENST00000581540 DAXXQ9UER7 740 aaPredicted RBP14.97□□□□□ -0.01
SUPT4H1-207ENST00000581540 KDM2AQ9Y2K7 1162 aa14.93□□□□□ -0.02
SUPT4H1-207ENST00000581540 BBXQ8WY36 941 aaPredicted RBP14.91□□□□□ -0.02
SUPT4H1-207ENST00000581540 ARXQ96QS3 562 aa14.9□□□□□ -0.02
SUPT4H1-207ENST00000581540 SPDYE4A6NLX3 237 aa14.89□□□□□ -0.03
SUPT4H1-207ENST00000581540 PKD2Q13563 968 aa14.88□□□□□ -0.03
SUPT4H1-207ENST00000581540 ERICH6Q7L0X2 663 aa14.87□□□□□ -0.03
SUPT4H1-207ENST00000581540 IFNLR1Q8IU57 520 aaPredicted RBP14.85□□□□□ -0.03
SUPT4H1-207ENST00000581540 TIMELESSQ9UNS1 1208 aa14.83□□□□□ -0.04
SUPT4H1-207ENST00000581540 FBLN2P98095 1184 aa14.82□□□□□ -0.04
SUPT4H1-207ENST00000581540 PAXIP1Q6ZW49 1069 aaPredicted RBP14.81□□□□□ -0.04
SUPT4H1-207ENST00000581540 PROM2Q8N271 834 aa14.8□□□□□ -0.04
SUPT4H1-207ENST00000581540 TULP1O00294 542 aaPredicted RBP14.78□□□□□ -0.04
SUPT4H1-207ENST00000581540 CFAP44Q96MT7 982 aa14.77□□□□□ -0.05
SUPT4H1-207ENST00000581540 ZNF219Q9P2Y4 722 aaPredicted RBP14.71□□□□□ -0.05
SUPT4H1-207ENST00000581540 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.7□□□□□ -0.06
SUPT4H1-207ENST00000581540 GTF3C3Q9Y5Q9 886 aa14.69□□□□□ -0.06
SUPT4H1-207ENST00000581540 NBR1Q14596 966 aa14.68□□□□□ -0.06
SUPT4H1-207ENST00000581540 SPRYD3Q8NCJ5 442 aa14.64□□□□□ -0.07
SUPT4H1-207ENST00000581540 ECM2O94769 699 aaPredicted RBP14.62□□□□□ -0.07
SUPT4H1-207ENST00000581540 NPM1P06748 294 aaKnown RBP eCLIP14.59□□□□□ -0.07
SUPT4H1-207ENST00000581540 APLP2Q06481 763 aa14.56□□□□□ -0.08
SUPT4H1-207ENST00000581540 TSHZ2Q9NRE2 1034 aa14.55□□□□□ -0.08
SUPT4H1-207ENST00000581540 U3KPZ7 1027 aaPredicted RBP14.54□□□□□ -0.08
SUPT4H1-207ENST00000581540 HOMEZQ8IX15 550 aa14.53□□□□□ -0.08
SUPT4H1-207ENST00000581540 SPOCK2Q92563 424 aa14.53□□□□□ -0.08
SUPT4H1-207ENST00000581540 ABCC9O60706 1549 aa14.47□□□□□ -0.09
SUPT4H1-207ENST00000581540 KLHL34Q8N239 644 aa14.47□□□□□ -0.09
SUPT4H1-207ENST00000581540 DCAF8L1A6NGE4 600 aa14.45□□□□□ -0.1
SUPT4H1-207ENST00000581540 MKRN4PQ13434 485 aaPredicted RBP14.45□□□□□ -0.1
SUPT4H1-207ENST00000581540 DNAJC5Q9H3Z4 198 aa14.43□□□□□ -0.1
SUPT4H1-207ENST00000581540 TMEM132AQ24JP5 1023 aa14.42□□□□□ -0.1
SUPT4H1-207ENST00000581540 RGL2O15211 777 aa14.36□□□□□ -0.11
SUPT4H1-207ENST00000581540 C14orf37Q86TY3 774 aa14.33□□□□□ -0.12
SUPT4H1-207ENST00000581540 CHGAP10645 457 aaKnown RBP14.29□□□□□ -0.12
SUPT4H1-207ENST00000581540 CCDC180Q9P1Z9 1646 aa14.22□□□□□ -0.13
SUPT4H1-207ENST00000581540 STAG3Q9UJ98 1225 aa14.19□□□□□ -0.14
SUPT4H1-207ENST00000581540 PLCD3Q8N3E9 789 aa14.15□□□□□ -0.14
SUPT4H1-207ENST00000581540 HS6ST3Q8IZP7 471 aa14.12□□□□□ -0.15
SUPT4H1-207ENST00000581540 TRIM41Q8WV44 630 aa14.08□□□□□ -0.16
SUPT4H1-207ENST00000581540 CIZ1Q9ULV3 898 aaPredicted RBP14.06□□□□□ -0.16
SUPT4H1-207ENST00000581540 RANGAP1P46060 587 aaPredicted RBP14.02□□□□□ -0.17
SUPT4H1-207ENST00000581540 ZBTB12Q9Y330 459 aaPredicted RBP14□□□□□ -0.17
SUPT4H1-207ENST00000581540 POLA2Q14181 598 aa13.99□□□□□ -0.17
SUPT4H1-207ENST00000581540 ZBTB47Q9UFB7 747 aaPredicted RBP13.99□□□□□ -0.17
SUPT4H1-207ENST00000581540 MIER1Q8N108 512 aa13.97□□□□□ -0.17
SUPT4H1-207ENST00000581540 PLEKHG5O94827 1062 aa13.93□□□□□ -0.18
SUPT4H1-207ENST00000581540 TRHP20396 242 aaPredicted RBP13.91□□□□□ -0.18
SUPT4H1-207ENST00000581540 P3H3Q8IVL6 736 aa13.9□□□□□ -0.18
SUPT4H1-207ENST00000581540 PODXL2Q9NZ53 605 aa13.86□□□□□ -0.19
SUPT4H1-207ENST00000581540 GTPBP6O43824 516 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms