RNA–Protein interactions for RNA: ENST00000216714.7

APEX1-201, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APEX1, Length 1,484 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-201ENST00000216714 NISCHQ9Y2I1 1504 aa31.61■■■□□ 2.65
APEX1-201ENST00000216714 CCDC180Q9P1Z9 1646 aa27.94■■■□□ 2.06
APEX1-201ENST00000216714 ABCC9O60706 1549 aa27.22■■□□□ 1.95
APEX1-201ENST00000216714 DCAF8L2P0C7V8 631 aa26.55■■□□□ 1.84
APEX1-201ENST00000216714 ZCCHC6Q5VYS8 1495 aaKnown RBP26.35■■□□□ 1.81
APEX1-201ENST00000216714 NACADO15069 1562 aa26.23■■□□□ 1.79
APEX1-201ENST00000216714 RB1CC1Q8TDY2 1594 aa26.23■■□□□ 1.79
APEX1-201ENST00000216714 MYO15BQ96JP2 1530 aa26.09■■□□□ 1.77
APEX1-201ENST00000216714 DCAF1Q9Y4B6 1507 aa26.09■■□□□ 1.77
APEX1-201ENST00000216714 UNC13AQ9UPW8 1703 aa25.64■■□□□ 1.69
APEX1-201ENST00000216714 SCRIBQ14160 1630 aa25.61■■□□□ 1.69
APEX1-201ENST00000216714 PABPN1Q86U42 306 aaKnown RBP eCLIP25.55■■□□□ 1.68
APEX1-201ENST00000216714 BICRAQ9NZM4 1560 aa25.39■■□□□ 1.66
APEX1-201ENST00000216714 SHROOM4Q9ULL8 1493 aa25.29■■□□□ 1.64
APEX1-201ENST00000216714 DNAJC5BQ9UF47 199 aa24.77■■□□□ 1.56
APEX1-201ENST00000216714 EIF4G1Q04637 1599 aaKnown RBP24.72■■□□□ 1.55
APEX1-201ENST00000216714 CECR2Q9BXF3 1484 aa24.64■■□□□ 1.54
APEX1-201ENST00000216714 CC2D2AQ9P2K1 1620 aa24.59■■□□□ 1.53
APEX1-201ENST00000216714 BAZ1AQ9NRL2 1556 aaPredicted RBP24.48■■□□□ 1.51
APEX1-201ENST00000216714 SMARCA4P51532 1647 aa24.47■■□□□ 1.51
APEX1-201ENST00000216714 MROH2BQ7Z745 1585 aa24.39■■□□□ 1.5
APEX1-201ENST00000216714 ATAD2BQ9ULI0 1458 aa24.28■■□□□ 1.48
APEX1-201ENST00000216714 SMARCA2P51531 1590 aa24.25■■□□□ 1.47
APEX1-201ENST00000216714 NCAPD3P42695 1498 aa24.21■■□□□ 1.47
APEX1-201ENST00000216714 RSF1Q96T23 1441 aaPredicted RBP24.2■■□□□ 1.46
APEX1-201ENST00000216714 PEG3Q9GZU2 1588 aa24.16■■□□□ 1.46
APEX1-201ENST00000216714 WIZO95785 1651 aa24.16■■□□□ 1.46
APEX1-201ENST00000216714 BAZ1BQ9UIG0 1483 aaKnown RBP24.12■■□□□ 1.45
APEX1-201ENST00000216714 HMGXB3Q12766 1538 aa24.08■■□□□ 1.45
APEX1-201ENST00000216714 SUPT5HO00267 1087 aaKnown RBP23.96■■□□□ 1.43
APEX1-201ENST00000216714 TOP2AP11388 1531 aaKnown RBP23.87■■□□□ 1.41
APEX1-201ENST00000216714 CCDC88BA6NC98 1476 aa23.64■■□□□ 1.38
APEX1-201ENST00000216714 NESP48681 1621 aa23.62■■□□□ 1.37
APEX1-201ENST00000216714 CADPSQ9ULU8 1353 aa23.56■■□□□ 1.36
APEX1-201ENST00000216714 LAMC3Q9Y6N6 1575 aa23.53■■□□□ 1.36
APEX1-201ENST00000216714 ERCC6Q03468 1493 aa23.45■■□□□ 1.34
APEX1-201ENST00000216714 CFTRP13569 1480 aa23.43■■□□□ 1.34
APEX1-201ENST00000216714 PDS5BQ9NTI5 1447 aa23.41■■□□□ 1.34
APEX1-201ENST00000216714 KIF21AQ7Z4S6 1674 aa23.32■■□□□ 1.32
APEX1-201ENST00000216714 FANCD2Q9BXW9 1451 aa23.3■■□□□ 1.32
APEX1-201ENST00000216714 PRDM2Q13029 1718 aa23.27■■□□□ 1.32
APEX1-201ENST00000216714 CEP164Q9UPV0 1460 aa23.23■■□□□ 1.31
APEX1-201ENST00000216714 MRC2Q9UBG0 1479 aa23.13■■□□□ 1.29
APEX1-201ENST00000216714 THOC2Q8NI27 1593 aaKnown RBP23.12■■□□□ 1.29
APEX1-201ENST00000216714 URB2Q14146 1524 aaKnown RBP23.03■■□□□ 1.28
APEX1-201ENST00000216714 CUX2O14529 1486 aa23.01■■□□□ 1.27
APEX1-201ENST00000216714 WDR62O43379 1518 aa23■■□□□ 1.27
APEX1-201ENST00000216714 TOPBP1Q92547 1522 aa22.94■■□□□ 1.26
APEX1-201ENST00000216714 ABCC8Q09428 1581 aa22.94■■□□□ 1.26
APEX1-201ENST00000216714 DNMBPQ6XZF7 1577 aa22.92■■□□□ 1.26
APEX1-201ENST00000216714 CUX1P39880 1505 aa22.86■■□□□ 1.25
APEX1-201ENST00000216714 WRNQ14191 1432 aaPredicted RBP eCLIP22.83■■□□□ 1.255e-6■■■■■ 29.2
APEX1-201ENST00000216714 POLA1P09884 1462 aaPredicted RBP22.75■■□□□ 1.23
APEX1-201ENST00000216714 FGD5Q6ZNL6 1462 aa22.75■■□□□ 1.23
APEX1-201ENST00000216714 SYNJ1O43426 1573 aa22.74■■□□□ 1.23
APEX1-201ENST00000216714 CHIC1Q5VXU3 224 aa22.73■■□□□ 1.23
APEX1-201ENST00000216714 SOGA1O94964 1423 aa22.72■■□□□ 1.23
APEX1-201ENST00000216714 IFT140Q96RY7 1462 aa22.72■■□□□ 1.23
APEX1-201ENST00000216714 TOP2BQ02880 1626 aa22.71■■□□□ 1.23
APEX1-201ENST00000216714 RAD54L2Q9Y4B4 1467 aa22.71■■□□□ 1.23
APEX1-201ENST00000216714 BIVM-ERCC5R4GMW8 1640 aa22.69■■□□□ 1.22
APEX1-201ENST00000216714 TARBP1Q13395 1621 aaKnown RBP22.64■■□□□ 1.21
APEX1-201ENST00000216714 ZNF608Q9ULD9 1512 aaPredicted RBP22.62■■□□□ 1.21
APEX1-201ENST00000216714 TRIM41Q8WV44 630 aa22.59■■□□□ 1.21
APEX1-201ENST00000216714 TDRD9Q8NDG6 1382 aaKnown RBP22.58■■□□□ 1.21
APEX1-201ENST00000216714 AQRO60306 1485 aaKnown RBP eCLIP22.57■■□□□ 1.23e-9■■■□□ 17.9
APEX1-201ENST00000216714 ABCA10Q8WWZ4 1543 aa22.51■■□□□ 1.19
APEX1-201ENST00000216714 EIF4G3O43432 1585 aaKnown RBP22.5■■□□□ 1.19
APEX1-201ENST00000216714 WDR97A6NE52 1622 aa22.48■■□□□ 1.19
APEX1-201ENST00000216714 GAPVD1Q14C86 1478 aa22.44■■□□□ 1.18
APEX1-201ENST00000216714 GRIN2BQ13224 1484 aa22.39■■□□□ 1.17
APEX1-201ENST00000216714 ABCA5Q8WWZ7 1642 aa22.38■■□□□ 1.17
APEX1-201ENST00000216714 FBLN2P98095 1184 aa22.35■■□□□ 1.17
APEX1-201ENST00000216714 PBRM1Q86U86 1689 aa22.35■■□□□ 1.17
APEX1-201ENST00000216714 KIF27Q86VH2 1401 aa22.34■■□□□ 1.17
APEX1-201ENST00000216714 SNAPC4Q5SXM2 1469 aa22.33■■□□□ 1.16
APEX1-201ENST00000216714 CHMP7Q8WUX9 453 aaPredicted RBP22.28■■□□□ 1.16
APEX1-201ENST00000216714 MAGI1Q96QZ7 1491 aaPredicted RBP22.27■■□□□ 1.16
APEX1-201ENST00000216714 ERICH3Q5RHP9 1530 aa22.24■■□□□ 1.15
APEX1-201ENST00000216714 RUSC2Q8N2Y8 1516 aa22.24■■□□□ 1.15
APEX1-201ENST00000216714 IGF1RP08069 1367 aa22.23■■□□□ 1.15
APEX1-201ENST00000216714 OSCARQ8IYS5 282 aa22.22■■□□□ 1.15
APEX1-201ENST00000216714 CHD1O14646 1710 aa22.21■■□□□ 1.15
APEX1-201ENST00000216714 SYNJ2O15056 1496 aa22.19■■□□□ 1.14
APEX1-201ENST00000216714 FHAD1B1AJZ9 1412 aa22.17■■□□□ 1.14
APEX1-201ENST00000216714 FAM9AQ8IZU1 332 aaPredicted RBP22.17■■□□□ 1.14
APEX1-201ENST00000216714 ADAMTS12P58397 1594 aa22.15■■□□□ 1.14
APEX1-201ENST00000216714 CARMIL1Q5VZK9 1371 aa22.12■■□□□ 1.13
APEX1-201ENST00000216714 CUL7Q14999 1698 aa22.1■■□□□ 1.13
APEX1-201ENST00000216714 GRIN2AQ12879 1464 aa22.09■■□□□ 1.13
APEX1-201ENST00000216714 CSRNP3Q8WYN3 585 aa22.09■■□□□ 1.13
APEX1-201ENST00000216714 DNAJC5Q9H3Z4 198 aa22.09■■□□□ 1.13
APEX1-201ENST00000216714 EEA1Q15075 1411 aa22.07■■□□□ 1.12
APEX1-201ENST00000216714 RAPGEF2Q9Y4G8 1499 aa21.99■■□□□ 1.11
APEX1-201ENST00000216714 CEP170Q5SW79 1584 aa21.96■■□□□ 1.11
APEX1-201ENST00000216714 NUP160Q12769 1436 aa21.95■■□□□ 1.1
APEX1-201ENST00000216714 PRXQ9BXM0 1461 aa21.93■■□□□ 1.1
APEX1-201ENST00000216714 EHMT2Q96KQ7 1210 aa21.92■■□□□ 1.1
APEX1-201ENST00000216714 CLASP1Q7Z460 1538 aa21.91■■□□□ 1.1
APEX1-201ENST00000216714 JPH4Q96JJ6 628 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms