RNA–Protein interactions for RNA: ENST00000587975.2

R3HDM4-203, Transcript of R3H domain containing 4, humanhuman

TSL 3 BASIC

Gene R3HDM4, Length 1,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-203ENST00000587975 NISCHQ9Y2I1 1504 aa50.1■■■■■ 5.61
R3HDM4-203ENST00000587975 CCDC180Q9P1Z9 1646 aa43.16■■■■■ 4.5
R3HDM4-203ENST00000587975 ZCCHC6Q5VYS8 1495 aaKnown RBP42.33■■■■■ 4.37
R3HDM4-203ENST00000587975 SHROOM4Q9ULL8 1493 aa41.53■■■■■ 4.24
R3HDM4-203ENST00000587975 DCAF1Q9Y4B6 1507 aa41.5■■■■■ 4.23
R3HDM4-203ENST00000587975 DCAF8L2P0C7V8 631 aa40.86■■■■■ 4.13
R3HDM4-203ENST00000587975 MYO15BQ96JP2 1530 aa40.61■■■■■ 4.09
R3HDM4-203ENST00000587975 SUPT5HO00267 1087 aaKnown RBP40.53■■■■■ 4.08
R3HDM4-203ENST00000587975 NACADO15069 1562 aa39.95■■■■□ 3.99
R3HDM4-203ENST00000587975 ABCC9O60706 1549 aa39.83■■■■□ 3.97
R3HDM4-203ENST00000587975 SCRIBQ14160 1630 aa39.78■■■■□ 3.96
R3HDM4-203ENST00000587975 CHIC1Q5VXU3 224 aa39.48■■■■□ 3.91
R3HDM4-203ENST00000587975 RB1CC1Q8TDY2 1594 aa39.31■■■■□ 3.88
R3HDM4-203ENST00000587975 RSF1Q96T23 1441 aaPredicted RBP39.3■■■■□ 3.88
R3HDM4-203ENST00000587975 CECR2Q9BXF3 1484 aa38.79■■■■□ 3.8
R3HDM4-203ENST00000587975 MROH2BQ7Z745 1585 aa38.72■■■■□ 3.79
R3HDM4-203ENST00000587975 BAZ1AQ9NRL2 1556 aaPredicted RBP38.61■■■■□ 3.77
R3HDM4-203ENST00000587975 UNC13AQ9UPW8 1703 aa38.51■■■■□ 3.76
R3HDM4-203ENST00000587975 WIZO95785 1651 aa38.43■■■■□ 3.74
R3HDM4-203ENST00000587975 SMARCA4P51532 1647 aa38.26■■■■□ 3.71
R3HDM4-203ENST00000587975 TOP2AP11388 1531 aaKnown RBP38.13■■■■□ 3.69
R3HDM4-203ENST00000587975 BICRAQ9NZM4 1560 aa38.11■■■■□ 3.69
R3HDM4-203ENST00000587975 TRIM41Q8WV44 630 aa38.09■■■■□ 3.69
R3HDM4-203ENST00000587975 EIF4G1Q04637 1599 aaKnown RBP37.97■■■■□ 3.67
R3HDM4-203ENST00000587975 LOC105371045A0A1W2PR82 267 aa37.94■■■■□ 3.66
R3HDM4-203ENST00000587975 PEG3Q9GZU2 1588 aa37.8■■■■□ 3.64
R3HDM4-203ENST00000587975 SMARCA2P51531 1590 aa37.78■■■■□ 3.64
R3HDM4-203ENST00000587975 CCDC88BA6NC98 1476 aa37.74■■■■□ 3.63
R3HDM4-203ENST00000587975 PABPN1Q86U42 306 aaKnown RBP eCLIP37.68■■■■□ 3.624e-10■□□□□ 11.2
R3HDM4-203ENST00000587975 PCGF6Q9BYE7 350 aa37.41■■■■□ 3.58
R3HDM4-203ENST00000587975 ATAD2BQ9ULI0 1458 aa37.37■■■■□ 3.57
R3HDM4-203ENST00000587975 HRCP23327 699 aa37.34■■■■□ 3.57
R3HDM4-203ENST00000587975 FAM9AQ8IZU1 332 aaPredicted RBP37.34■■■■□ 3.57
R3HDM4-203ENST00000587975 ABCC8Q09428 1581 aa37.24■■■■□ 3.55
R3HDM4-203ENST00000587975 TRIM26Q12899 539 aaPredicted RBP37.22■■■■□ 3.55
R3HDM4-203ENST00000587975 BAZ1BQ9UIG0 1483 aaKnown RBP37.2■■■■□ 3.55
R3HDM4-203ENST00000587975 EEA1Q15075 1411 aa37.1■■■■□ 3.53
R3HDM4-203ENST00000587975 WRNQ14191 1432 aaPredicted RBP eCLIP36.95■■■■□ 3.51
R3HDM4-203ENST00000587975 HMGXB3Q12766 1538 aa36.92■■■■□ 3.5
R3HDM4-203ENST00000587975 NCAPD3P42695 1498 aa36.88■■■■□ 3.49
R3HDM4-203ENST00000587975 SOGA1O94964 1423 aa36.81■■■■□ 3.48
R3HDM4-203ENST00000587975 SYNJ1O43426 1573 aa36.72■■■■□ 3.47
R3HDM4-203ENST00000587975 CSRNP3Q8WYN3 585 aa36.71■■■■□ 3.47
R3HDM4-203ENST00000587975 TNIKQ9UKE5 1360 aa36.7■■■■□ 3.47
R3HDM4-203ENST00000587975 EHMT2Q96KQ7 1210 aa36.68■■■■□ 3.46
R3HDM4-203ENST00000587975 RUSC2Q8N2Y8 1516 aa36.59■■■■□ 3.45
R3HDM4-203ENST00000587975 GOLGA3Q08378 1498 aa36.58■■■■□ 3.45
R3HDM4-203ENST00000587975 CEP162Q5TB80 1403 aa36.54■■■■□ 3.44
R3HDM4-203ENST00000587975 TOP2BQ02880 1626 aa36.53■■■■□ 3.44
R3HDM4-203ENST00000587975 KIF21BO75037 1637 aa36.5■■■■□ 3.43
R3HDM4-203ENST00000587975 BIVM-ERCC5R4GMW8 1640 aa36.47■■■■□ 3.43
R3HDM4-203ENST00000587975 CEP164Q9UPV0 1460 aa36.47■■■■□ 3.43
R3HDM4-203ENST00000587975 ZEB1P37275 1124 aaPredicted RBP36.39■■■■□ 3.42
R3HDM4-203ENST00000587975 CFTRP13569 1480 aa36.37■■■■□ 3.41
R3HDM4-203ENST00000587975 UBTFP17480 764 aaKnown RBP36.27■■■■□ 3.4
R3HDM4-203ENST00000587975 PRDM2Q13029 1718 aa36.21■■■■□ 3.39
R3HDM4-203ENST00000587975 PPARGC1BQ86YN6 1023 aaKnown RBP36.15■■■■□ 3.38
R3HDM4-203ENST00000587975 CUX1P39880 1505 aa36.14■■■■□ 3.38
R3HDM4-203ENST00000587975 ERICH3Q5RHP9 1530 aa36.08■■■■□ 3.37
R3HDM4-203ENST00000587975 RAPGEF2Q9Y4G8 1499 aa36.03■■■■□ 3.36
R3HDM4-203ENST00000587975 CC2D2AQ9P2K1 1620 aa36.01■■■■□ 3.35
R3HDM4-203ENST00000587975 CLIP1P30622 1438 aa36■■■■□ 3.35
R3HDM4-203ENST00000587975 CADPSQ9ULU8 1353 aa36■■■■□ 3.35
R3HDM4-203ENST00000587975 PRXQ9BXM0 1461 aa35.99■■■■□ 3.35
R3HDM4-203ENST00000587975 DNAJC5BQ9UF47 199 aa35.95■■■■□ 3.35
R3HDM4-203ENST00000587975 KIF27Q86VH2 1401 aa35.93■■■■□ 3.34
R3HDM4-203ENST00000587975 VPS8Q8N3P4 1428 aa35.88■■■■□ 3.33
R3HDM4-203ENST00000587975 FANCD2Q9BXW9 1451 aa35.58■■■■□ 3.29
R3HDM4-203ENST00000587975 FGD5Q6ZNL6 1462 aa35.55■■■■□ 3.28
R3HDM4-203ENST00000587975 CUX2O14529 1486 aa35.54■■■■□ 3.28
R3HDM4-203ENST00000587975 ARAP1Q96P48 1450 aa35.51■■■■□ 3.28
R3HDM4-203ENST00000587975 APLP2Q06481 763 aa35.51■■■■□ 3.27
R3HDM4-203ENST00000587975 CCER1Q8TC90 406 aaPredicted RBP35.5■■■■□ 3.27
R3HDM4-203ENST00000587975 DNMBPQ6XZF7 1577 aa35.49■■■■□ 3.27
R3HDM4-203ENST00000587975 IGF1RP08069 1367 aa35.49■■■■□ 3.27
R3HDM4-203ENST00000587975 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.46■■■■□ 3.27
R3HDM4-203ENST00000587975 TTBK1Q5TCY1 1321 aaPredicted RBP35.44■■■■□ 3.26
R3HDM4-203ENST00000587975 LAMC3Q9Y6N6 1575 aa35.42■■■■□ 3.26
R3HDM4-203ENST00000587975 CARMIL1Q5VZK9 1371 aa35.33■■■■□ 3.25
R3HDM4-203ENST00000587975 ABCA10Q8WWZ4 1543 aa35.32■■■■□ 3.25
R3HDM4-203ENST00000587975 TOPBP1Q92547 1522 aa35.32■■■■□ 3.25
R3HDM4-203ENST00000587975 ARHGAP35Q9NRY4 1499 aa35.3■■■■□ 3.24
R3HDM4-203ENST00000587975 POLA1P09884 1462 aaPredicted RBP35.24■■■■□ 3.23
R3HDM4-203ENST00000587975 RANGAP1P46060 587 aaPredicted RBP35.23■■■■□ 3.23
R3HDM4-203ENST00000587975 NESP48681 1621 aa35.23■■■■□ 3.23
R3HDM4-203ENST00000587975 MAP3K1Q13233 1512 aa35.13■■■■□ 3.21
R3HDM4-203ENST00000587975 CUL7Q14999 1698 aa35.12■■■■□ 3.21
R3HDM4-203ENST00000587975 PDS5BQ9NTI5 1447 aa35.12■■■■□ 3.21
R3HDM4-203ENST00000587975 RAD54L2Q9Y4B4 1467 aa35.09■■■■□ 3.21
R3HDM4-203ENST00000587975 WDR97A6NE52 1622 aa35.07■■■■□ 3.2
R3HDM4-203ENST00000587975 URB2Q14146 1524 aaKnown RBP35.07■■■■□ 3.2
R3HDM4-203ENST00000587975 RRBP1Q9P2E9 1410 aaKnown RBP35.02■■■■□ 3.2
R3HDM4-203ENST00000587975 HNRNPUL2Q1KMD3 747 aaKnown RBP34.99■■■■□ 3.19
R3HDM4-203ENST00000587975 KANK4Q5T7N3 995 aaPredicted RBP34.97■■■■□ 3.19
R3HDM4-203ENST00000587975 FHAD1B1AJZ9 1412 aa34.96■■■■□ 3.19
R3HDM4-203ENST00000587975 EFCAB5A4FU69 1503 aa34.95■■■■□ 3.18
R3HDM4-203ENST00000587975 ABCA5Q8WWZ7 1642 aa34.91■■■■□ 3.18
R3HDM4-203ENST00000587975 TIAM1Q13009 1591 aa34.91■■■■□ 3.18
R3HDM4-203ENST00000587975 CTTNBP2Q8WZ74 1663 aa34.85■■■■□ 3.17
R3HDM4-203ENST00000587975 CLSPNQ9HAW4 1339 aa34.82■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms