RNA–Protein interactions for RNA: ENST00000581204.1

SUPT4H1-206, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-206ENST00000581204 CHIC1Q5VXU3 224 aa24.03■■□□□ 1.44
SUPT4H1-206ENST00000581204 AEBP2Q6ZN18 517 aaPredicted RBP23.92■■□□□ 1.42
SUPT4H1-206ENST00000581204 PHF23Q9BUL5 403 aaPredicted RBP21.07■□□□□ 0.96
SUPT4H1-206ENST00000581204 SENP3Q9H4L4 574 aaPredicted RBP20.41■□□□□ 0.86
SUPT4H1-206ENST00000581204 NISCHQ9Y2I1 1504 aa20.2■□□□□ 0.82
SUPT4H1-206ENST00000581204 PLPPR3Q6T4P5 718 aa19.84■□□□□ 0.77
SUPT4H1-206ENST00000581204 ABCC9O60706 1549 aa19.15■□□□□ 0.66
SUPT4H1-206ENST00000581204 FOXD1Q16676 465 aa18.74■□□□□ 0.59
SUPT4H1-206ENST00000581204 DNAJC5BQ9UF47 199 aa18.69■□□□□ 0.58
SUPT4H1-206ENST00000581204 CCDC180Q9P1Z9 1646 aa18.47■□□□□ 0.55
SUPT4H1-206ENST00000581204 ADRA2BP18089 450 aa18.43■□□□□ 0.54
SUPT4H1-206ENST00000581204 PPP6R1Q9UPN7 881 aa18.38■□□□□ 0.53
SUPT4H1-206ENST00000581204 RB1CC1Q8TDY2 1594 aa17.89■□□□□ 0.45
SUPT4H1-206ENST00000581204 PIAS4Q8N2W9 510 aaPredicted RBP17.87■□□□□ 0.45
SUPT4H1-206ENST00000581204 PABPN1Q86U42 306 aaKnown RBP eCLIP17.67■□□□□ 0.42
SUPT4H1-206ENST00000581204 DNAJC5Q9H3Z4 198 aa17.64■□□□□ 0.41
SUPT4H1-206ENST00000581204 KCNA4P22459 653 aa17.62■□□□□ 0.41
SUPT4H1-206ENST00000581204 NACADO15069 1562 aa17.61■□□□□ 0.41
SUPT4H1-206ENST00000581204 UNC13AQ9UPW8 1703 aa17.57■□□□□ 0.4
SUPT4H1-206ENST00000581204 BICRAQ9NZM4 1560 aa17.52■□□□□ 0.39
SUPT4H1-206ENST00000581204 PPP4R3CPQ6ZMV5 832 aa17.46■□□□□ 0.39
SUPT4H1-206ENST00000581204 CECR2Q9BXF3 1484 aa17.33■□□□□ 0.37
SUPT4H1-206ENST00000581204 NCBP3Q53F19 620 aaKnown RBP17.31■□□□□ 0.36
SUPT4H1-206ENST00000581204 CC2D2AQ9P2K1 1620 aa17.3■□□□□ 0.36
SUPT4H1-206ENST00000581204 MSH5O43196 834 aa17.23■□□□□ 0.35
SUPT4H1-206ENST00000581204 MYO15BQ96JP2 1530 aa17.16■□□□□ 0.34
SUPT4H1-206ENST00000581204 SHROOM4Q9ULL8 1493 aa17.14■□□□□ 0.33
SUPT4H1-206ENST00000581204 DCAF8L2P0C7V8 631 aa17.14■□□□□ 0.33
SUPT4H1-206ENST00000581204 SCAF1Q9H7N4 1312 aaKnown RBP17.1■□□□□ 0.33
SUPT4H1-206ENST00000581204 EIF4G1Q04637 1599 aaKnown RBP17.09■□□□□ 0.33
SUPT4H1-206ENST00000581204 EHMT2Q96KQ7 1210 aa17.03■□□□□ 0.32
SUPT4H1-206ENST00000581204 SLC4A1APQ9BWU0 796 aaKnown RBP16.96■□□□□ 0.31
SUPT4H1-206ENST00000581204 CNKSR2Q8WXI2 1034 aa16.93■□□□□ 0.3
SUPT4H1-206ENST00000581204 NPM3O75607 178 aaKnown RBP16.9■□□□□ 0.3
SUPT4H1-206ENST00000581204 CUX2O14529 1486 aa16.84■□□□□ 0.29
SUPT4H1-206ENST00000581204 SCRIBQ14160 1630 aa16.76■□□□□ 0.27
SUPT4H1-206ENST00000581204 DCAF1Q9Y4B6 1507 aa16.66■□□□□ 0.26
SUPT4H1-206ENST00000581204 ZCCHC6Q5VYS8 1495 aaKnown RBP16.62■□□□□ 0.25
SUPT4H1-206ENST00000581204 CSRNP3Q8WYN3 585 aa16.58■□□□□ 0.24
SUPT4H1-206ENST00000581204 ERCC6Q03468 1493 aa16.53■□□□□ 0.24
SUPT4H1-206ENST00000581204 MAPK8IP2Q13387 824 aaPredicted RBP16.51■□□□□ 0.23
SUPT4H1-206ENST00000581204 TRIM41Q8WV44 630 aa16.47■□□□□ 0.23
SUPT4H1-206ENST00000581204 RNF216Q9NWF9 866 aaPredicted RBP16.47■□□□□ 0.23
SUPT4H1-206ENST00000581204 DMRT2Q9Y5R5 561 aa16.34■□□□□ 0.21
SUPT4H1-206ENST00000581204 THOC2Q8NI27 1593 aaKnown RBP16.32■□□□□ 0.2
SUPT4H1-206ENST00000581204 NESP48681 1621 aa16.28■□□□□ 0.2
SUPT4H1-206ENST00000581204 NCAPD3P42695 1498 aa16.28■□□□□ 0.2
SUPT4H1-206ENST00000581204 HOXD11P31277 338 aaPredicted RBP16.22■□□□□ 0.19
SUPT4H1-206ENST00000581204 FOXD4L1Q9NU39 408 aa16.17■□□□□ 0.18
SUPT4H1-206ENST00000581204 ZBTB22O15209 634 aa16.16■□□□□ 0.18
SUPT4H1-206ENST00000581204 ATAD2BQ9ULI0 1458 aa16.13■□□□□ 0.17
SUPT4H1-206ENST00000581204 HMGXB3Q12766 1538 aa16.11■□□□□ 0.17
SUPT4H1-206ENST00000581204 SMARCA2P51531 1590 aa16.08■□□□□ 0.16
SUPT4H1-206ENST00000581204 KIF21AQ7Z4S6 1674 aa16.05■□□□□ 0.16
SUPT4H1-206ENST00000581204 LAMC3Q9Y6N6 1575 aa16.01■□□□□ 0.15
SUPT4H1-206ENST00000581204 BAZ1AQ9NRL2 1556 aaPredicted RBP15.98■□□□□ 0.15
SUPT4H1-206ENST00000581204 SMARCA4P51532 1647 aa15.94■□□□□ 0.14
SUPT4H1-206ENST00000581204 WDR62O43379 1518 aa15.89■□□□□ 0.13
SUPT4H1-206ENST00000581204 PDS5BQ9NTI5 1447 aa15.89■□□□□ 0.13
SUPT4H1-206ENST00000581204 BAZ1BQ9UIG0 1483 aaKnown RBP15.88■□□□□ 0.13
SUPT4H1-206ENST00000581204 MRC2Q9UBG0 1479 aa15.86■□□□□ 0.13
SUPT4H1-206ENST00000581204 RIMBP3CA6NJZ7 1639 aa15.84■□□□□ 0.13
SUPT4H1-206ENST00000581204 RIMBP3BA6NNM3 1639 aa15.84■□□□□ 0.13
SUPT4H1-206ENST00000581204 RIMBP3Q9UFD9 1639 aa15.84■□□□□ 0.13
SUPT4H1-206ENST00000581204 OSCARQ8IYS5 282 aa15.82■□□□□ 0.12
SUPT4H1-206ENST00000581204 PEG3Q9GZU2 1588 aa15.82■□□□□ 0.12
SUPT4H1-206ENST00000581204 SLC4A2P04920 1241 aa15.77■□□□□ 0.12
SUPT4H1-206ENST00000581204 CADPSQ9ULU8 1353 aa15.71■□□□□ 0.11
SUPT4H1-206ENST00000581204 ARHGEF11O15085 1522 aa15.7■□□□□ 0.1
SUPT4H1-206ENST00000581204 MYCNP04198 464 aaPredicted RBP15.7■□□□□ 0.1
SUPT4H1-206ENST00000581204 ATXN8OSP0DMR3 200 aa15.64■□□□□ 0.09
SUPT4H1-206ENST00000581204 CEP164Q9UPV0 1460 aa15.62■□□□□ 0.09
SUPT4H1-206ENST00000581204 MROH2BQ7Z745 1585 aa15.58■□□□□ 0.08
SUPT4H1-206ENST00000581204 DCAF8L1A6NGE4 600 aa15.56■□□□□ 0.08
SUPT4H1-206ENST00000581204 FANCD2Q9BXW9 1451 aa15.55■□□□□ 0.08
SUPT4H1-206ENST00000581204 ARAP1Q96P48 1450 aa15.52■□□□□ 0.08
SUPT4H1-206ENST00000581204 URB2Q14146 1524 aaKnown RBP15.52■□□□□ 0.07
SUPT4H1-206ENST00000581204 TRHP20396 242 aaPredicted RBP15.51■□□□□ 0.07
SUPT4H1-206ENST00000581204 CYB5RLQ6IPT4 315 aa15.5■□□□□ 0.07
SUPT4H1-206ENST00000581204 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.46■□□□□ 0.07
SUPT4H1-206ENST00000581204 ZNF608Q9ULD9 1512 aaPredicted RBP15.44■□□□□ 0.06
SUPT4H1-206ENST00000581204 CFTRP13569 1480 aa15.42■□□□□ 0.06
SUPT4H1-206ENST00000581204 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.42■□□□□ 0.06
SUPT4H1-206ENST00000581204 HNRNPUL2Q1KMD3 747 aaKnown RBP15.42■□□□□ 0.06
SUPT4H1-206ENST00000581204 IFT140Q96RY7 1462 aa15.34■□□□□ 0.05
SUPT4H1-206ENST00000581204 SAMD1Q6SPF0 538 aaPredicted RBP15.34■□□□□ 0.05
SUPT4H1-206ENST00000581204 WIZO95785 1651 aa15.34■□□□□ 0.05
SUPT4H1-206ENST00000581204 RSF1Q96T23 1441 aaPredicted RBP15.34■□□□□ 0.05
SUPT4H1-206ENST00000581204 CHD1O14646 1710 aa15.33■□□□□ 0.04
SUPT4H1-206ENST00000581204 EIF4G3O43432 1585 aaKnown RBP15.32■□□□□ 0.04
SUPT4H1-206ENST00000581204 U3KPZ7 1027 aaPredicted RBP15.22■□□□□ 0.03
SUPT4H1-206ENST00000581204 PRDM2Q13029 1718 aa15.2■□□□□ 0.02
SUPT4H1-206ENST00000581204 CLASP1Q7Z460 1538 aa15.19■□□□□ 0.02
SUPT4H1-206ENST00000581204 TOPBP1Q92547 1522 aa15.19■□□□□ 0.02
SUPT4H1-206ENST00000581204 APLP2Q06481 763 aa15.17■□□□□ 0.02
SUPT4H1-206ENST00000581204 ILDR1Q86SU0 546 aaPredicted RBP15.17■□□□□ 0.02
SUPT4H1-206ENST00000581204 TARBP1Q13395 1621 aaKnown RBP15.16■□□□□ 0.02
SUPT4H1-206ENST00000581204 AQRO60306 1485 aaKnown RBP eCLIP15.15■□□□□ 0.023e-10■■■■■ 35.5
SUPT4H1-206ENST00000581204 TOP2AP11388 1531 aaKnown RBP15.09■□□□□ 0.01
SUPT4H1-206ENST00000581204 DNMBPQ6XZF7 1577 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms