RNA–Protein interactions for RNA: ENST00000482441.1

PRRC2A-209, Transcript of proline rich coiled-coil 2A, humanhuman

TSL 2

Gene PRRC2A, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRC2A-209ENST00000482441 NISCHQ9Y2I1 1504 aa28.92■■■□□ 2.22
PRRC2A-209ENST00000482441 CCDC180Q9P1Z9 1646 aa26.1■■□□□ 1.77
PRRC2A-209ENST00000482441 ABCC9O60706 1549 aa25.98■■□□□ 1.75
PRRC2A-209ENST00000482441 RB1CC1Q8TDY2 1594 aa24.78■■□□□ 1.56
PRRC2A-209ENST00000482441 NACADO15069 1562 aa24.63■■□□□ 1.53
PRRC2A-209ENST00000482441 DNAJC5BQ9UF47 199 aa24.5■■□□□ 1.51
PRRC2A-209ENST00000482441 UNC13AQ9UPW8 1703 aa24.38■■□□□ 1.49
PRRC2A-209ENST00000482441 MYO15BQ96JP2 1530 aa24.35■■□□□ 1.49
PRRC2A-209ENST00000482441 BICRAQ9NZM4 1560 aa24.19■■□□□ 1.46
PRRC2A-209ENST00000482441 PABPN1Q86U42 306 aaKnown RBP eCLIP24.06■■□□□ 1.443e-7■□□□□ 8.9
PRRC2A-209ENST00000482441 DCAF8L2P0C7V8 631 aa24■■□□□ 1.43
PRRC2A-209ENST00000482441 ZCCHC6Q5VYS8 1495 aaKnown RBP24■■□□□ 1.43
PRRC2A-209ENST00000482441 DCAF1Q9Y4B6 1507 aa23.99■■□□□ 1.43
PRRC2A-209ENST00000482441 SHROOM4Q9ULL8 1493 aa23.86■■□□□ 1.41
PRRC2A-209ENST00000482441 SCRIBQ14160 1630 aa23.62■■□□□ 1.37
PRRC2A-209ENST00000482441 CC2D2AQ9P2K1 1620 aa23.58■■□□□ 1.36
PRRC2A-209ENST00000482441 EIF4G1Q04637 1599 aaKnown RBP23.52■■□□□ 1.36
PRRC2A-209ENST00000482441 CECR2Q9BXF3 1484 aa23.45■■□□□ 1.34
PRRC2A-209ENST00000482441 NCAPD3P42695 1498 aa22.73■■□□□ 1.23
PRRC2A-209ENST00000482441 ATAD2BQ9ULI0 1458 aa22.61■■□□□ 1.21
PRRC2A-209ENST00000482441 SMARCA4P51532 1647 aa22.61■■□□□ 1.21
PRRC2A-209ENST00000482441 HMGXB3Q12766 1538 aa22.6■■□□□ 1.21
PRRC2A-209ENST00000482441 DNAJC5Q9H3Z4 198 aa22.56■■□□□ 1.2
PRRC2A-209ENST00000482441 CUX2O14529 1486 aa22.54■■□□□ 1.2
PRRC2A-209ENST00000482441 SMARCA2P51531 1590 aa22.54■■□□□ 1.2
PRRC2A-209ENST00000482441 PEG3Q9GZU2 1588 aa22.49■■□□□ 1.19
PRRC2A-209ENST00000482441 BAZ1AQ9NRL2 1556 aaPredicted RBP22.44■■□□□ 1.18
PRRC2A-209ENST00000482441 ERCC6Q03468 1493 aa22.37■■□□□ 1.17
PRRC2A-209ENST00000482441 NESP48681 1621 aa22.35■■□□□ 1.17
PRRC2A-209ENST00000482441 BAZ1BQ9UIG0 1483 aaKnown RBP22.32■■□□□ 1.16
PRRC2A-209ENST00000482441 THOC2Q8NI27 1593 aaKnown RBP22.29■■□□□ 1.16
PRRC2A-209ENST00000482441 MROH2BQ7Z745 1585 aa22.26■■□□□ 1.15
PRRC2A-209ENST00000482441 LAMC3Q9Y6N6 1575 aa22.24■■□□□ 1.15
PRRC2A-209ENST00000482441 KIF21AQ7Z4S6 1674 aa22.14■■□□□ 1.13
PRRC2A-209ENST00000482441 PDS5BQ9NTI5 1447 aa21.99■■□□□ 1.11
PRRC2A-209ENST00000482441 WIZO95785 1651 aa21.99■■□□□ 1.11
PRRC2A-209ENST00000482441 CADPSQ9ULU8 1353 aa21.94■■□□□ 1.1
PRRC2A-209ENST00000482441 WDR62O43379 1518 aa21.92■■□□□ 1.1
PRRC2A-209ENST00000482441 MRC2Q9UBG0 1479 aa21.87■■□□□ 1.09
PRRC2A-209ENST00000482441 CFTRP13569 1480 aa21.75■■□□□ 1.07
PRRC2A-209ENST00000482441 RSF1Q96T23 1441 aaPredicted RBP21.73■■□□□ 1.07
PRRC2A-209ENST00000482441 CEP164Q9UPV0 1460 aa21.73■■□□□ 1.07
PRRC2A-209ENST00000482441 TOP2AP11388 1531 aaKnown RBP21.73■■□□□ 1.07
PRRC2A-209ENST00000482441 FANCD2Q9BXW9 1451 aa21.71■■□□□ 1.07
PRRC2A-209ENST00000482441 PRDM2Q13029 1718 aa21.64■■□□□ 1.06
PRRC2A-209ENST00000482441 URB2Q14146 1524 aaKnown RBP21.6■■□□□ 1.05
PRRC2A-209ENST00000482441 CCDC88BA6NC98 1476 aa21.41■■□□□ 1.02
PRRC2A-209ENST00000482441 TOPBP1Q92547 1522 aa21.32■■□□□ 1
PRRC2A-209ENST00000482441 IFT140Q96RY7 1462 aa21.32■■□□□ 1
PRRC2A-209ENST00000482441 ZNF608Q9ULD9 1512 aaPredicted RBP21.31■■□□□ 1
PRRC2A-209ENST00000482441 TRIM41Q8WV44 630 aa21.3■■□□□ 1
PRRC2A-209ENST00000482441 OSCARQ8IYS5 282 aa21.29■■□□□ 1
PRRC2A-209ENST00000482441 DNMBPQ6XZF7 1577 aa21.26■□□□□ 0.99
PRRC2A-209ENST00000482441 EIF4G3O43432 1585 aaKnown RBP21.25■□□□□ 0.99
PRRC2A-209ENST00000482441 RIMBP3CA6NJZ7 1639 aa21.23■□□□□ 0.99
PRRC2A-209ENST00000482441 RIMBP3BA6NNM3 1639 aa21.23■□□□□ 0.99
PRRC2A-209ENST00000482441 TARBP1Q13395 1621 aaKnown RBP21.23■□□□□ 0.99
PRRC2A-209ENST00000482441 RIMBP3Q9UFD9 1639 aa21.23■□□□□ 0.99
PRRC2A-209ENST00000482441 ABCC8Q09428 1581 aa21.23■□□□□ 0.99
PRRC2A-209ENST00000482441 ARHGEF11O15085 1522 aa21.14■□□□□ 0.97
PRRC2A-209ENST00000482441 CHD1O14646 1710 aa21.12■□□□□ 0.97
PRRC2A-209ENST00000482441 POLA1P09884 1462 aaPredicted RBP21.1■□□□□ 0.97
PRRC2A-209ENST00000482441 AQRO60306 1485 aaKnown RBP eCLIP21.03■□□□□ 0.96
PRRC2A-209ENST00000482441 WDR97A6NE52 1622 aa21.03■□□□□ 0.96
PRRC2A-209ENST00000482441 RAD54L2Q9Y4B4 1467 aa20.95■□□□□ 0.94
PRRC2A-209ENST00000482441 ARAP1Q96P48 1450 aa20.94■□□□□ 0.94
PRRC2A-209ENST00000482441 CUX1P39880 1505 aa20.94■□□□□ 0.94
PRRC2A-209ENST00000482441 FGD5Q6ZNL6 1462 aa20.92■□□□□ 0.94
PRRC2A-209ENST00000482441 CLASP1Q7Z460 1538 aa20.92■□□□□ 0.94
PRRC2A-209ENST00000482441 SOGA1O94964 1423 aa20.89■□□□□ 0.94
PRRC2A-209ENST00000482441 SNAPC4Q5SXM2 1469 aa20.86■□□□□ 0.93
PRRC2A-209ENST00000482441 TDRD9Q8NDG6 1382 aaKnown RBP20.85■□□□□ 0.93
PRRC2A-209ENST00000482441 MAGI1Q96QZ7 1491 aaPredicted RBP20.84■□□□□ 0.93
PRRC2A-209ENST00000482441 PBRM1Q86U86 1689 aa20.8■□□□□ 0.92
PRRC2A-209ENST00000482441 ABCA5Q8WWZ7 1642 aa20.78■□□□□ 0.92
PRRC2A-209ENST00000482441 GRIN2BQ13224 1484 aa20.78■□□□□ 0.92
PRRC2A-209ENST00000482441 SYNJ1O43426 1573 aa20.77■□□□□ 0.92
PRRC2A-209ENST00000482441 SYNJ2O15056 1496 aa20.75■□□□□ 0.91
PRRC2A-209ENST00000482441 CYB5RLQ6IPT4 315 aa20.75■□□□□ 0.91
PRRC2A-209ENST00000482441 ABCA10Q8WWZ4 1543 aa20.73■□□□□ 0.91
PRRC2A-209ENST00000482441 FBLN2P98095 1184 aa20.68■□□□□ 0.9
PRRC2A-209ENST00000482441 GAPVD1Q14C86 1478 aa20.68■□□□□ 0.9
PRRC2A-209ENST00000482441 BIVM-ERCC5R4GMW8 1640 aa20.64■□□□□ 0.89
PRRC2A-209ENST00000482441 ADAMTS12P58397 1594 aa20.59■□□□□ 0.89
PRRC2A-209ENST00000482441 CHMP7Q8WUX9 453 aaPredicted RBP20.59■□□□□ 0.89
PRRC2A-209ENST00000482441 TOP2BQ02880 1626 aa20.59■□□□□ 0.89
PRRC2A-209ENST00000482441 GRIN2AQ12879 1464 aa20.56■□□□□ 0.88
PRRC2A-209ENST00000482441 SHROOM2Q13796 1616 aa20.54■□□□□ 0.88
PRRC2A-209ENST00000482441 CEP170Q5SW79 1584 aa20.54■□□□□ 0.88
PRRC2A-209ENST00000482441 NUP160Q12769 1436 aa20.53■□□□□ 0.88
PRRC2A-209ENST00000482441 ERCC6L2Q5T890 1561 aa20.52■□□□□ 0.88
PRRC2A-209ENST00000482441 WRNQ14191 1432 aaPredicted RBP eCLIP20.51■□□□□ 0.87
PRRC2A-209ENST00000482441 SUPT5HO00267 1087 aaKnown RBP20.48■□□□□ 0.87
PRRC2A-209ENST00000482441 ERICH3Q5RHP9 1530 aa20.47■□□□□ 0.87
PRRC2A-209ENST00000482441 TRHP20396 242 aaPredicted RBP20.46■□□□□ 0.87
PRRC2A-209ENST00000482441 FHAD1B1AJZ9 1412 aa20.43■□□□□ 0.86
PRRC2A-209ENST00000482441 RUSC2Q8N2Y8 1516 aa20.32■□□□□ 0.84
PRRC2A-209ENST00000482441 KIF13AQ9H1H9 1805 aa20.3■□□□□ 0.84
PRRC2A-209ENST00000482441 PRG4Q92954 1404 aaPredicted RBP20.21■□□□□ 0.83
PRRC2A-209ENST00000482441 MAPKBP1O60336 1514 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms