RNA–Protein interactions for RNA: ENST00000560420.1

PSME1-207, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-207ENST00000560420 NISCHQ9Y2I1 1504 aa36.39■■■■□ 3.42
PSME1-207ENST00000560420 CCDC180Q9P1Z9 1646 aa32.45■■■□□ 2.79
PSME1-207ENST00000560420 ABCC9O60706 1549 aa31.81■■■□□ 2.68
PSME1-207ENST00000560420 RB1CC1Q8TDY2 1594 aa30.56■■■□□ 2.48
PSME1-207ENST00000560420 NACADO15069 1562 aa30.53■■■□□ 2.48
PSME1-207ENST00000560420 MYO15BQ96JP2 1530 aa30.38■■■□□ 2.45
PSME1-207ENST00000560420 ZCCHC6Q5VYS8 1495 aaKnown RBP30.31■■■□□ 2.44
PSME1-207ENST00000560420 DCAF1Q9Y4B6 1507 aa30.17■■■□□ 2.42
PSME1-207ENST00000560420 DCAF8L2P0C7V8 631 aa30.14■■■□□ 2.42
PSME1-207ENST00000560420 UNC13AQ9UPW8 1703 aa29.93■■■□□ 2.38
PSME1-207ENST00000560420 BICRAQ9NZM4 1560 aa29.76■■■□□ 2.35
PSME1-207ENST00000560420 PABPN1Q86U42 306 aaKnown RBP eCLIP29.64■■■□□ 2.344e-6■□□□□ 11
PSME1-207ENST00000560420 SCRIBQ14160 1630 aa29.5■■■□□ 2.31
PSME1-207ENST00000560420 SHROOM4Q9ULL8 1493 aa29.43■■■□□ 2.3
PSME1-207ENST00000560420 DNAJC5BQ9UF47 199 aa29.42■■■□□ 2.3
PSME1-207ENST00000560420 EIF4G1Q04637 1599 aaKnown RBP28.92■■■□□ 2.22
PSME1-207ENST00000560420 CC2D2AQ9P2K1 1620 aa28.82■■■□□ 2.2
PSME1-207ENST00000560420 CECR2Q9BXF3 1484 aa28.62■■■□□ 2.17
PSME1-207ENST00000560420 SMARCA4P51532 1647 aa28.27■■■□□ 2.12
PSME1-207ENST00000560420 NCAPD3P42695 1498 aa28.2■■■□□ 2.1
PSME1-207ENST00000560420 BAZ1AQ9NRL2 1556 aaPredicted RBP28.18■■■□□ 2.1
PSME1-207ENST00000560420 ATAD2BQ9ULI0 1458 aa28.16■■■□□ 2.1
PSME1-207ENST00000560420 SMARCA2P51531 1590 aa28.09■■■□□ 2.09
PSME1-207ENST00000560420 PEG3Q9GZU2 1588 aa28.08■■■□□ 2.09
PSME1-207ENST00000560420 HMGXB3Q12766 1538 aa28.05■■■□□ 2.08
PSME1-207ENST00000560420 MROH2BQ7Z745 1585 aa28.03■■■□□ 2.08
PSME1-207ENST00000560420 BAZ1BQ9UIG0 1483 aaKnown RBP27.86■■■□□ 2.05
PSME1-207ENST00000560420 WIZO95785 1651 aa27.68■■■□□ 2.02
PSME1-207ENST00000560420 RSF1Q96T23 1441 aaPredicted RBP27.64■■■□□ 2.02
PSME1-207ENST00000560420 NESP48681 1621 aa27.52■■■□□ 2
PSME1-207ENST00000560420 LAMC3Q9Y6N6 1575 aa27.45■■□□□ 1.99
PSME1-207ENST00000560420 TOP2AP11388 1531 aaKnown RBP27.41■■□□□ 1.98
PSME1-207ENST00000560420 ERCC6Q03468 1493 aa27.37■■□□□ 1.97
PSME1-207ENST00000560420 CADPSQ9ULU8 1353 aa27.3■■□□□ 1.96
PSME1-207ENST00000560420 CUX2O14529 1486 aa27.28■■□□□ 1.96
PSME1-207ENST00000560420 THOC2Q8NI27 1593 aaKnown RBP27.22■■□□□ 1.95
PSME1-207ENST00000560420 PDS5BQ9NTI5 1447 aa27.2■■□□□ 1.94
PSME1-207ENST00000560420 KIF21AQ7Z4S6 1674 aa27.19■■□□□ 1.94
PSME1-207ENST00000560420 CFTRP13569 1480 aa27.15■■□□□ 1.94
PSME1-207ENST00000560420 CCDC88BA6NC98 1476 aa27.06■■□□□ 1.92
PSME1-207ENST00000560420 FANCD2Q9BXW9 1451 aa26.99■■□□□ 1.91
PSME1-207ENST00000560420 MRC2Q9UBG0 1479 aa26.98■■□□□ 1.91
PSME1-207ENST00000560420 WDR62O43379 1518 aa26.96■■□□□ 1.91
PSME1-207ENST00000560420 CEP164Q9UPV0 1460 aa26.95■■□□□ 1.91
PSME1-207ENST00000560420 PRDM2Q13029 1718 aa26.92■■□□□ 1.9
PSME1-207ENST00000560420 URB2Q14146 1524 aaKnown RBP26.78■■□□□ 1.88
PSME1-207ENST00000560420 DNAJC5Q9H3Z4 198 aa26.6■■□□□ 1.85
PSME1-207ENST00000560420 TOPBP1Q92547 1522 aa26.56■■□□□ 1.84
PSME1-207ENST00000560420 SUPT5HO00267 1087 aaKnown RBP26.56■■□□□ 1.84
PSME1-207ENST00000560420 DNMBPQ6XZF7 1577 aa26.51■■□□□ 1.83
PSME1-207ENST00000560420 ABCC8Q09428 1581 aa26.5■■□□□ 1.83
PSME1-207ENST00000560420 IFT140Q96RY7 1462 aa26.42■■□□□ 1.82
PSME1-207ENST00000560420 ZNF608Q9ULD9 1512 aaPredicted RBP26.34■■□□□ 1.81
PSME1-207ENST00000560420 TARBP1Q13395 1621 aaKnown RBP26.33■■□□□ 1.81
PSME1-207ENST00000560420 POLA1P09884 1462 aaPredicted RBP26.33■■□□□ 1.81
PSME1-207ENST00000560420 CUX1P39880 1505 aa26.31■■□□□ 1.8
PSME1-207ENST00000560420 EIF4G3O43432 1585 aaKnown RBP26.23■■□□□ 1.79
PSME1-207ENST00000560420 FGD5Q6ZNL6 1462 aa26.21■■□□□ 1.79
PSME1-207ENST00000560420 RAD54L2Q9Y4B4 1467 aa26.17■■□□□ 1.78
PSME1-207ENST00000560420 SOGA1O94964 1423 aa26.14■■□□□ 1.78
PSME1-207ENST00000560420 WDR97A6NE52 1622 aa26.11■■□□□ 1.77
PSME1-207ENST00000560420 AQRO60306 1485 aaKnown RBP eCLIP26.11■■□□□ 1.771e-7■■■□□ 16.3
PSME1-207ENST00000560420 BIVM-ERCC5R4GMW8 1640 aa26.05■■□□□ 1.76
PSME1-207ENST00000560420 TOP2BQ02880 1626 aa26.03■■□□□ 1.76
PSME1-207ENST00000560420 SYNJ1O43426 1573 aa26.02■■□□□ 1.76
PSME1-207ENST00000560420 WRNQ14191 1432 aaPredicted RBP eCLIP26.01■■□□□ 1.75
PSME1-207ENST00000560420 TDRD9Q8NDG6 1382 aaKnown RBP26.01■■□□□ 1.75
PSME1-207ENST00000560420 ABCA10Q8WWZ4 1543 aa25.99■■□□□ 1.75
PSME1-207ENST00000560420 OSCARQ8IYS5 282 aa25.98■■□□□ 1.75
PSME1-207ENST00000560420 ABCA5Q8WWZ7 1642 aa25.93■■□□□ 1.74
PSME1-207ENST00000560420 CHD1O14646 1710 aa25.9■■□□□ 1.74
PSME1-207ENST00000560420 GRIN2BQ13224 1484 aa25.89■■□□□ 1.73
PSME1-207ENST00000560420 SNAPC4Q5SXM2 1469 aa25.89■■□□□ 1.73
PSME1-207ENST00000560420 MAGI1Q96QZ7 1491 aaPredicted RBP25.87■■□□□ 1.73
PSME1-207ENST00000560420 GAPVD1Q14C86 1478 aa25.86■■□□□ 1.73
PSME1-207ENST00000560420 PBRM1Q86U86 1689 aa25.84■■□□□ 1.73
PSME1-207ENST00000560420 SYNJ2O15056 1496 aa25.77■■□□□ 1.72
PSME1-207ENST00000560420 CLASP1Q7Z460 1538 aa25.71■■□□□ 1.71
PSME1-207ENST00000560420 RIMBP3CA6NJZ7 1639 aa25.7■■□□□ 1.7
PSME1-207ENST00000560420 RIMBP3BA6NNM3 1639 aa25.7■■□□□ 1.7
PSME1-207ENST00000560420 RIMBP3Q9UFD9 1639 aa25.7■■□□□ 1.7
PSME1-207ENST00000560420 ARHGEF11O15085 1522 aa25.68■■□□□ 1.7
PSME1-207ENST00000560420 ADAMTS12P58397 1594 aa25.67■■□□□ 1.7
PSME1-207ENST00000560420 ERICH3Q5RHP9 1530 aa25.67■■□□□ 1.7
PSME1-207ENST00000560420 FBLN2P98095 1184 aa25.65■■□□□ 1.7
PSME1-207ENST00000560420 CHMP7Q8WUX9 453 aaPredicted RBP25.62■■□□□ 1.69
PSME1-207ENST00000560420 GRIN2AQ12879 1464 aa25.58■■□□□ 1.69
PSME1-207ENST00000560420 FHAD1B1AJZ9 1412 aa25.57■■□□□ 1.68
PSME1-207ENST00000560420 NUP160Q12769 1436 aa25.53■■□□□ 1.68
PSME1-207ENST00000560420 CEP170Q5SW79 1584 aa25.49■■□□□ 1.67
PSME1-207ENST00000560420 ARAP1Q96P48 1450 aa25.49■■□□□ 1.67
PSME1-207ENST00000560420 TRIM41Q8WV44 630 aa25.48■■□□□ 1.67
PSME1-207ENST00000560420 KIF27Q86VH2 1401 aa25.46■■□□□ 1.67
PSME1-207ENST00000560420 IGF1RP08069 1367 aa25.43■■□□□ 1.66
PSME1-207ENST00000560420 SHROOM2Q13796 1616 aa25.37■■□□□ 1.65
PSME1-207ENST00000560420 CUL7Q14999 1698 aa25.37■■□□□ 1.65
PSME1-207ENST00000560420 RUSC2Q8N2Y8 1516 aa25.31■■□□□ 1.64
PSME1-207ENST00000560420 CYB5RLQ6IPT4 315 aa25.3■■□□□ 1.64
PSME1-207ENST00000560420 ERCC6L2Q5T890 1561 aa25.3■■□□□ 1.64
PSME1-207ENST00000560420 CARMIL1Q5VZK9 1371 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms