RNA–Protein interactions for RNA: ENST00000581166.5

SUPT4H1-205, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-205ENST00000581166 NISCHQ9Y2I1 1504 aa34.53■■■■□ 3.12
SUPT4H1-205ENST00000581166 CCDC180Q9P1Z9 1646 aa30.8■■■□□ 2.52
SUPT4H1-205ENST00000581166 ABCC9O60706 1549 aa30.33■■■□□ 2.45
SUPT4H1-205ENST00000581166 RB1CC1Q8TDY2 1594 aa29.1■■■□□ 2.25
SUPT4H1-205ENST00000581166 NACADO15069 1562 aa29.02■■■□□ 2.24
SUPT4H1-205ENST00000581166 DCAF8L2P0C7V8 631 aa28.93■■■□□ 2.22
SUPT4H1-205ENST00000581166 MYO15BQ96JP2 1530 aa28.79■■■□□ 2.2
SUPT4H1-205ENST00000581166 ZCCHC6Q5VYS8 1495 aaKnown RBP28.71■■■□□ 2.19
SUPT4H1-205ENST00000581166 DCAF1Q9Y4B6 1507 aa28.57■■■□□ 2.16
SUPT4H1-205ENST00000581166 UNC13AQ9UPW8 1703 aa28.43■■■□□ 2.14
SUPT4H1-205ENST00000581166 PABPN1Q86U42 306 aaKnown RBP eCLIP28.31■■■□□ 2.12
SUPT4H1-205ENST00000581166 BICRAQ9NZM4 1560 aa28.23■■■□□ 2.11
SUPT4H1-205ENST00000581166 SCRIBQ14160 1630 aa28.06■■■□□ 2.08
SUPT4H1-205ENST00000581166 DNAJC5BQ9UF47 199 aa28.06■■■□□ 2.08
SUPT4H1-205ENST00000581166 SHROOM4Q9ULL8 1493 aa27.93■■■□□ 2.06
SUPT4H1-205ENST00000581166 EIF4G1Q04637 1599 aaKnown RBP27.49■■□□□ 1.99
SUPT4H1-205ENST00000581166 CC2D2AQ9P2K1 1620 aa27.44■■□□□ 1.98
SUPT4H1-205ENST00000581166 CECR2Q9BXF3 1484 aa27.29■■□□□ 1.96
SUPT4H1-205ENST00000581166 SMARCA4P51532 1647 aa26.84■■□□□ 1.89
SUPT4H1-205ENST00000581166 NCAPD3P42695 1498 aa26.78■■□□□ 1.88
SUPT4H1-205ENST00000581166 BAZ1AQ9NRL2 1556 aaPredicted RBP26.78■■□□□ 1.88
SUPT4H1-205ENST00000581166 ATAD2BQ9ULI0 1458 aa26.75■■□□□ 1.87
SUPT4H1-205ENST00000581166 SMARCA2P51531 1590 aa26.71■■□□□ 1.87
SUPT4H1-205ENST00000581166 HMGXB3Q12766 1538 aa26.62■■□□□ 1.85
SUPT4H1-205ENST00000581166 MROH2BQ7Z745 1585 aa26.6■■□□□ 1.85
SUPT4H1-205ENST00000581166 PEG3Q9GZU2 1588 aa26.59■■□□□ 1.85
SUPT4H1-205ENST00000581166 BAZ1BQ9UIG0 1483 aaKnown RBP26.51■■□□□ 1.83
SUPT4H1-205ENST00000581166 WIZO95785 1651 aa26.3■■□□□ 1.8
SUPT4H1-205ENST00000581166 RSF1Q96T23 1441 aaPredicted RBP26.22■■□□□ 1.79
SUPT4H1-205ENST00000581166 NESP48681 1621 aa26.19■■□□□ 1.78
SUPT4H1-205ENST00000581166 ERCC6Q03468 1493 aa26.17■■□□□ 1.78
SUPT4H1-205ENST00000581166 LAMC3Q9Y6N6 1575 aa26.11■■□□□ 1.77
SUPT4H1-205ENST00000581166 TOP2AP11388 1531 aaKnown RBP26.01■■□□□ 1.75
SUPT4H1-205ENST00000581166 CUX2O14529 1486 aa25.99■■□□□ 1.75
SUPT4H1-205ENST00000581166 CADPSQ9ULU8 1353 aa25.99■■□□□ 1.75
SUPT4H1-205ENST00000581166 PDS5BQ9NTI5 1447 aa25.95■■□□□ 1.74
SUPT4H1-205ENST00000581166 KIF21AQ7Z4S6 1674 aa25.87■■□□□ 1.73
SUPT4H1-205ENST00000581166 THOC2Q8NI27 1593 aaKnown RBP25.84■■□□□ 1.73
SUPT4H1-205ENST00000581166 CFTRP13569 1480 aa25.79■■□□□ 1.72
SUPT4H1-205ENST00000581166 CCDC88BA6NC98 1476 aa25.71■■□□□ 1.71
SUPT4H1-205ENST00000581166 FANCD2Q9BXW9 1451 aa25.68■■□□□ 1.7
SUPT4H1-205ENST00000581166 MRC2Q9UBG0 1479 aa25.68■■□□□ 1.7
SUPT4H1-205ENST00000581166 CEP164Q9UPV0 1460 aa25.67■■□□□ 1.7
SUPT4H1-205ENST00000581166 WDR62O43379 1518 aa25.61■■□□□ 1.69
SUPT4H1-205ENST00000581166 PRDM2Q13029 1718 aa25.57■■□□□ 1.68
SUPT4H1-205ENST00000581166 DNAJC5Q9H3Z4 198 aa25.46■■□□□ 1.67
SUPT4H1-205ENST00000581166 URB2Q14146 1524 aaKnown RBP25.43■■□□□ 1.66
SUPT4H1-205ENST00000581166 SUPT5HO00267 1087 aaKnown RBP25.37■■□□□ 1.65
SUPT4H1-205ENST00000581166 ABCC8Q09428 1581 aa25.25■■□□□ 1.63
SUPT4H1-205ENST00000581166 TOPBP1Q92547 1522 aa25.24■■□□□ 1.63
SUPT4H1-205ENST00000581166 DNMBPQ6XZF7 1577 aa25.19■■□□□ 1.62
SUPT4H1-205ENST00000581166 IFT140Q96RY7 1462 aa25.14■■□□□ 1.62
SUPT4H1-205ENST00000581166 ZNF608Q9ULD9 1512 aaPredicted RBP25.04■■□□□ 1.6
SUPT4H1-205ENST00000581166 POLA1P09884 1462 aaPredicted RBP25.01■■□□□ 1.59
SUPT4H1-205ENST00000581166 TARBP1Q13395 1621 aaKnown RBP24.99■■□□□ 1.59
SUPT4H1-205ENST00000581166 CUX1P39880 1505 aa24.97■■□□□ 1.59
SUPT4H1-205ENST00000581166 EIF4G3O43432 1585 aaKnown RBP24.93■■□□□ 1.58
SUPT4H1-205ENST00000581166 SOGA1O94964 1423 aa24.91■■□□□ 1.58
SUPT4H1-205ENST00000581166 FGD5Q6ZNL6 1462 aa24.91■■□□□ 1.58
SUPT4H1-205ENST00000581166 RAD54L2Q9Y4B4 1467 aa24.9■■□□□ 1.58
SUPT4H1-205ENST00000581166 OSCARQ8IYS5 282 aa24.88■■□□□ 1.57
SUPT4H1-205ENST00000581166 AQRO60306 1485 aaKnown RBP eCLIP24.87■■□□□ 1.575e-8■■■■■ 32.2
SUPT4H1-205ENST00000581166 WDR97A6NE52 1622 aa24.8■■□□□ 1.56
SUPT4H1-205ENST00000581166 TDRD9Q8NDG6 1382 aaKnown RBP24.79■■□□□ 1.56
SUPT4H1-205ENST00000581166 WRNQ14191 1432 aaPredicted RBP eCLIP24.72■■□□□ 1.55
SUPT4H1-205ENST00000581166 TOP2BQ02880 1626 aa24.7■■□□□ 1.54
SUPT4H1-205ENST00000581166 BIVM-ERCC5R4GMW8 1640 aa24.7■■□□□ 1.54
SUPT4H1-205ENST00000581166 ABCA10Q8WWZ4 1543 aa24.68■■□□□ 1.54
SUPT4H1-205ENST00000581166 SYNJ1O43426 1573 aa24.66■■□□□ 1.54
SUPT4H1-205ENST00000581166 CHD1O14646 1710 aa24.66■■□□□ 1.54
SUPT4H1-205ENST00000581166 GRIN2BQ13224 1484 aa24.65■■□□□ 1.54
SUPT4H1-205ENST00000581166 SNAPC4Q5SXM2 1469 aa24.63■■□□□ 1.53
SUPT4H1-205ENST00000581166 GAPVD1Q14C86 1478 aa24.63■■□□□ 1.53
SUPT4H1-205ENST00000581166 FBLN2P98095 1184 aa24.61■■□□□ 1.53
SUPT4H1-205ENST00000581166 MAGI1Q96QZ7 1491 aaPredicted RBP24.61■■□□□ 1.53
SUPT4H1-205ENST00000581166 ABCA5Q8WWZ7 1642 aa24.59■■□□□ 1.53
SUPT4H1-205ENST00000581166 PBRM1Q86U86 1689 aa24.57■■□□□ 1.52
SUPT4H1-205ENST00000581166 CHMP7Q8WUX9 453 aaPredicted RBP24.52■■□□□ 1.52
SUPT4H1-205ENST00000581166 SYNJ2O15056 1496 aa24.51■■□□□ 1.51
SUPT4H1-205ENST00000581166 TRIM41Q8WV44 630 aa24.51■■□□□ 1.51
SUPT4H1-205ENST00000581166 RIMBP3CA6NJZ7 1639 aa24.49■■□□□ 1.51
SUPT4H1-205ENST00000581166 RIMBP3BA6NNM3 1639 aa24.49■■□□□ 1.51
SUPT4H1-205ENST00000581166 RIMBP3Q9UFD9 1639 aa24.49■■□□□ 1.51
SUPT4H1-205ENST00000581166 ARHGEF11O15085 1522 aa24.46■■□□□ 1.51
SUPT4H1-205ENST00000581166 CLASP1Q7Z460 1538 aa24.39■■□□□ 1.5
SUPT4H1-205ENST00000581166 ERICH3Q5RHP9 1530 aa24.38■■□□□ 1.49
SUPT4H1-205ENST00000581166 ADAMTS12P58397 1594 aa24.37■■□□□ 1.49
SUPT4H1-205ENST00000581166 GRIN2AQ12879 1464 aa24.33■■□□□ 1.49
SUPT4H1-205ENST00000581166 FHAD1B1AJZ9 1412 aa24.33■■□□□ 1.49
SUPT4H1-205ENST00000581166 CYB5RLQ6IPT4 315 aa24.25■■□□□ 1.47
SUPT4H1-205ENST00000581166 ARAP1Q96P48 1450 aa24.25■■□□□ 1.47
SUPT4H1-205ENST00000581166 NUP160Q12769 1436 aa24.23■■□□□ 1.47
SUPT4H1-205ENST00000581166 KIF27Q86VH2 1401 aa24.23■■□□□ 1.47
SUPT4H1-205ENST00000581166 CEP170Q5SW79 1584 aa24.21■■□□□ 1.47
SUPT4H1-205ENST00000581166 IGF1RP08069 1367 aa24.16■■□□□ 1.46
SUPT4H1-205ENST00000581166 CUL7Q14999 1698 aa24.11■■□□□ 1.45
SUPT4H1-205ENST00000581166 SHROOM2Q13796 1616 aa24.07■■□□□ 1.44
SUPT4H1-205ENST00000581166 ERCC6L2Q5T890 1561 aa24.03■■□□□ 1.44
SUPT4H1-205ENST00000581166 CARMIL1Q5VZK9 1371 aa24.02■■□□□ 1.44
SUPT4H1-205ENST00000581166 RUSC2Q8N2Y8 1516 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms