RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 NISCHQ9Y2I1 1504 aa34.68■■■■□ 3.14
SUPT4H1-201ENST00000225504 CCDC180Q9P1Z9 1646 aa30.66■■■□□ 2.5
SUPT4H1-201ENST00000225504 ABCC9O60706 1549 aa30■■■□□ 2.39
SUPT4H1-201ENST00000225504 DCAF8L2P0C7V8 631 aa29.06■■■□□ 2.24
SUPT4H1-201ENST00000225504 ZCCHC6Q5VYS8 1495 aaKnown RBP28.89■■■□□ 2.22
SUPT4H1-201ENST00000225504 NACADO15069 1562 aa28.82■■■□□ 2.2
SUPT4H1-201ENST00000225504 RB1CC1Q8TDY2 1594 aa28.82■■■□□ 2.2
SUPT4H1-201ENST00000225504 MYO15BQ96JP2 1530 aa28.67■■■□□ 2.18
SUPT4H1-201ENST00000225504 DCAF1Q9Y4B6 1507 aa28.63■■■□□ 2.17
SUPT4H1-201ENST00000225504 UNC13AQ9UPW8 1703 aa28.23■■■□□ 2.11
SUPT4H1-201ENST00000225504 PABPN1Q86U42 306 aaKnown RBP eCLIP28.14■■■□□ 2.09
SUPT4H1-201ENST00000225504 SCRIBQ14160 1630 aa28.09■■■□□ 2.09
SUPT4H1-201ENST00000225504 BICRAQ9NZM4 1560 aa28.03■■■□□ 2.08
SUPT4H1-201ENST00000225504 SHROOM4Q9ULL8 1493 aa27.62■■■□□ 2.01
SUPT4H1-201ENST00000225504 DNAJC5BQ9UF47 199 aa27.52■■■□□ 2
SUPT4H1-201ENST00000225504 EIF4G1Q04637 1599 aaKnown RBP27.23■■□□□ 1.95
SUPT4H1-201ENST00000225504 CC2D2AQ9P2K1 1620 aa27.1■■□□□ 1.93
SUPT4H1-201ENST00000225504 CECR2Q9BXF3 1484 aa27.09■■□□□ 1.93
SUPT4H1-201ENST00000225504 SMARCA4P51532 1647 aa26.85■■□□□ 1.89
SUPT4H1-201ENST00000225504 BAZ1AQ9NRL2 1556 aaPredicted RBP26.82■■□□□ 1.88
SUPT4H1-201ENST00000225504 MROH2BQ7Z745 1585 aa26.78■■□□□ 1.88
SUPT4H1-201ENST00000225504 ATAD2BQ9ULI0 1458 aa26.7■■□□□ 1.87
SUPT4H1-201ENST00000225504 NCAPD3P42695 1498 aa26.65■■□□□ 1.86
SUPT4H1-201ENST00000225504 SMARCA2P51531 1590 aa26.6■■□□□ 1.85
SUPT4H1-201ENST00000225504 PEG3Q9GZU2 1588 aa26.55■■□□□ 1.84
SUPT4H1-201ENST00000225504 RSF1Q96T23 1441 aaPredicted RBP26.53■■□□□ 1.84
SUPT4H1-201ENST00000225504 WIZO95785 1651 aa26.5■■□□□ 1.83
SUPT4H1-201ENST00000225504 HMGXB3Q12766 1538 aa26.47■■□□□ 1.83
SUPT4H1-201ENST00000225504 BAZ1BQ9UIG0 1483 aaKnown RBP26.46■■□□□ 1.83
SUPT4H1-201ENST00000225504 TOP2AP11388 1531 aaKnown RBP26.15■■□□□ 1.78
SUPT4H1-201ENST00000225504 SUPT5HO00267 1087 aaKnown RBP26.07■■□□□ 1.76
SUPT4H1-201ENST00000225504 NESP48681 1621 aa26.04■■□□□ 1.76
SUPT4H1-201ENST00000225504 CCDC88BA6NC98 1476 aa25.92■■□□□ 1.74
SUPT4H1-201ENST00000225504 CADPSQ9ULU8 1353 aa25.9■■□□□ 1.74
SUPT4H1-201ENST00000225504 LAMC3Q9Y6N6 1575 aa25.86■■□□□ 1.73
SUPT4H1-201ENST00000225504 ERCC6Q03468 1493 aa25.77■■□□□ 1.72
SUPT4H1-201ENST00000225504 CFTRP13569 1480 aa25.76■■□□□ 1.71
SUPT4H1-201ENST00000225504 PDS5BQ9NTI5 1447 aa25.71■■□□□ 1.71
SUPT4H1-201ENST00000225504 KIF21AQ7Z4S6 1674 aa25.65■■□□□ 1.7
SUPT4H1-201ENST00000225504 FANCD2Q9BXW9 1451 aa25.59■■□□□ 1.69
SUPT4H1-201ENST00000225504 CEP164Q9UPV0 1460 aa25.51■■□□□ 1.67
SUPT4H1-201ENST00000225504 THOC2Q8NI27 1593 aaKnown RBP25.5■■□□□ 1.67
SUPT4H1-201ENST00000225504 PRDM2Q13029 1718 aa25.49■■□□□ 1.67
SUPT4H1-201ENST00000225504 MRC2Q9UBG0 1479 aa25.44■■□□□ 1.66
SUPT4H1-201ENST00000225504 CUX2O14529 1486 aa25.4■■□□□ 1.66
SUPT4H1-201ENST00000225504 URB2Q14146 1524 aaKnown RBP25.35■■□□□ 1.65
SUPT4H1-201ENST00000225504 WDR62O43379 1518 aa25.33■■□□□ 1.65
SUPT4H1-201ENST00000225504 TOPBP1Q92547 1522 aa25.2■■□□□ 1.62
SUPT4H1-201ENST00000225504 ABCC8Q09428 1581 aa25.14■■□□□ 1.62
SUPT4H1-201ENST00000225504 DNMBPQ6XZF7 1577 aa25.14■■□□□ 1.62
SUPT4H1-201ENST00000225504 CUX1P39880 1505 aa25.09■■□□□ 1.61
SUPT4H1-201ENST00000225504 POLA1P09884 1462 aaPredicted RBP24.99■■□□□ 1.59
SUPT4H1-201ENST00000225504 WRNQ14191 1432 aaPredicted RBP eCLIP24.97■■□□□ 1.59
SUPT4H1-201ENST00000225504 FGD5Q6ZNL6 1462 aa24.96■■□□□ 1.59
SUPT4H1-201ENST00000225504 IFT140Q96RY7 1462 aa24.96■■□□□ 1.59
SUPT4H1-201ENST00000225504 RAD54L2Q9Y4B4 1467 aa24.95■■□□□ 1.58
SUPT4H1-201ENST00000225504 SOGA1O94964 1423 aa24.93■■□□□ 1.58
SUPT4H1-201ENST00000225504 ZNF608Q9ULD9 1512 aaPredicted RBP24.93■■□□□ 1.58
SUPT4H1-201ENST00000225504 SYNJ1O43426 1573 aa24.92■■□□□ 1.58
SUPT4H1-201ENST00000225504 TARBP1Q13395 1621 aaKnown RBP24.91■■□□□ 1.58
SUPT4H1-201ENST00000225504 TOP2BQ02880 1626 aa24.87■■□□□ 1.57
SUPT4H1-201ENST00000225504 BIVM-ERCC5R4GMW8 1640 aa24.86■■□□□ 1.57
SUPT4H1-201ENST00000225504 AQRO60306 1485 aaKnown RBP eCLIP24.82■■□□□ 1.565e-8■■■■■ 32.2
SUPT4H1-201ENST00000225504 TDRD9Q8NDG6 1382 aaKnown RBP24.82■■□□□ 1.56
SUPT4H1-201ENST00000225504 EIF4G3O43432 1585 aaKnown RBP24.75■■□□□ 1.55
SUPT4H1-201ENST00000225504 ABCA10Q8WWZ4 1543 aa24.71■■□□□ 1.55
SUPT4H1-201ENST00000225504 WDR97A6NE52 1622 aa24.69■■□□□ 1.54
SUPT4H1-201ENST00000225504 GAPVD1Q14C86 1478 aa24.61■■□□□ 1.53
SUPT4H1-201ENST00000225504 ABCA5Q8WWZ7 1642 aa24.58■■□□□ 1.53
SUPT4H1-201ENST00000225504 DNAJC5Q9H3Z4 198 aa24.57■■□□□ 1.52
SUPT4H1-201ENST00000225504 GRIN2BQ13224 1484 aa24.56■■□□□ 1.52
SUPT4H1-201ENST00000225504 TRIM41Q8WV44 630 aa24.56■■□□□ 1.52
SUPT4H1-201ENST00000225504 SNAPC4Q5SXM2 1469 aa24.53■■□□□ 1.52
SUPT4H1-201ENST00000225504 FBLN2P98095 1184 aa24.51■■□□□ 1.51
SUPT4H1-201ENST00000225504 PBRM1Q86U86 1689 aa24.51■■□□□ 1.51
SUPT4H1-201ENST00000225504 OSCARQ8IYS5 282 aa24.49■■□□□ 1.51
SUPT4H1-201ENST00000225504 MAGI1Q96QZ7 1491 aaPredicted RBP24.45■■□□□ 1.5
SUPT4H1-201ENST00000225504 CHD1O14646 1710 aa24.43■■□□□ 1.5
SUPT4H1-201ENST00000225504 CHIC1Q5VXU3 224 aa24.42■■□□□ 1.5
SUPT4H1-201ENST00000225504 CHMP7Q8WUX9 453 aaPredicted RBP24.42■■□□□ 1.5
SUPT4H1-201ENST00000225504 KIF27Q86VH2 1401 aa24.42■■□□□ 1.5
SUPT4H1-201ENST00000225504 ERICH3Q5RHP9 1530 aa24.38■■□□□ 1.49
SUPT4H1-201ENST00000225504 RUSC2Q8N2Y8 1516 aa24.38■■□□□ 1.49
SUPT4H1-201ENST00000225504 IGF1RP08069 1367 aa24.38■■□□□ 1.49
SUPT4H1-201ENST00000225504 SYNJ2O15056 1496 aa24.38■■□□□ 1.49
SUPT4H1-201ENST00000225504 ADAMTS12P58397 1594 aa24.32■■□□□ 1.48
SUPT4H1-201ENST00000225504 FHAD1B1AJZ9 1412 aa24.32■■□□□ 1.48
SUPT4H1-201ENST00000225504 GRIN2AQ12879 1464 aa24.25■■□□□ 1.47
SUPT4H1-201ENST00000225504 CARMIL1Q5VZK9 1371 aa24.21■■□□□ 1.47
SUPT4H1-201ENST00000225504 CUL7Q14999 1698 aa24.17■■□□□ 1.46
SUPT4H1-201ENST00000225504 CLASP1Q7Z460 1538 aa24.16■■□□□ 1.46
SUPT4H1-201ENST00000225504 CEP170Q5SW79 1584 aa24.15■■□□□ 1.46
SUPT4H1-201ENST00000225504 NUP160Q12769 1436 aa24.14■■□□□ 1.45
SUPT4H1-201ENST00000225504 FAM9AQ8IZU1 332 aaPredicted RBP24.13■■□□□ 1.45
SUPT4H1-201ENST00000225504 CSRNP3Q8WYN3 585 aa24.09■■□□□ 1.45
SUPT4H1-201ENST00000225504 RAPGEF2Q9Y4G8 1499 aa24.04■■□□□ 1.44
SUPT4H1-201ENST00000225504 ARHGEF11O15085 1522 aa24.04■■□□□ 1.44
SUPT4H1-201ENST00000225504 RIMBP3CA6NJZ7 1639 aa24.04■■□□□ 1.44
SUPT4H1-201ENST00000225504 RIMBP3BA6NNM3 1639 aa24.04■■□□□ 1.44
SUPT4H1-201ENST00000225504 RIMBP3Q9UFD9 1639 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms