RNA–Protein interactions for RNA: ENST00000397224.8

FOXRED2-204, Transcript of FAD dependent oxidoreductase domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXRED2, Length 4,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED2-204ENST00000397224 DCAF8L2P0C7V8 631 aa27.25■■□□□ 1.95
FOXRED2-204ENST00000397224 NISCHQ9Y2I1 1504 aa26.98■■□□□ 1.91
FOXRED2-204ENST00000397224 SUPT5HO00267 1087 aaKnown RBP26.24■■□□□ 1.79
FOXRED2-204ENST00000397224 SHROOM4Q9ULL8 1493 aa25.9■■□□□ 1.74
FOXRED2-204ENST00000397224 EHMT2Q96KQ7 1210 aa25.17■■□□□ 1.62
FOXRED2-204ENST00000397224 FAM9AQ8IZU1 332 aaPredicted RBP24.68■■□□□ 1.54
FOXRED2-204ENST00000397224 PCGF6Q9BYE7 350 aa24.59■■□□□ 1.53
FOXRED2-204ENST00000397224 APLP2Q06481 763 aa24.42■■□□□ 1.5
FOXRED2-204ENST00000397224 TTBK1Q5TCY1 1321 aaPredicted RBP24.33■■□□□ 1.48
FOXRED2-204ENST00000397224 TRIM41Q8WV44 630 aa24.27■■□□□ 1.48
FOXRED2-204ENST00000397224 PELP1Q8IZL8 1130 aaKnown RBP24.02■■□□□ 1.44
FOXRED2-204ENST00000397224 RANGAP1P46060 587 aaPredicted RBP24.01■■□□□ 1.43
FOXRED2-204ENST00000397224 ZEB1P37275 1124 aaPredicted RBP23.94■■□□□ 1.42
FOXRED2-204ENST00000397224 CCER1Q8TC90 406 aaPredicted RBP23.91■■□□□ 1.42
FOXRED2-204ENST00000397224 UBTFP17480 764 aaKnown RBP23.83■■□□□ 1.41
FOXRED2-204ENST00000397224 PPARGC1BQ86YN6 1023 aaKnown RBP23.68■■□□□ 1.38
FOXRED2-204ENST00000397224 CENPBP07199 599 aaPredicted RBP23.68■■□□□ 1.38
FOXRED2-204ENST00000397224 CHIC1Q5VXU3 224 aa23.66■■□□□ 1.38
FOXRED2-204ENST00000397224 ATP1B4Q9UN42 357 aaPredicted RBP23.62■■□□□ 1.37
FOXRED2-204ENST00000397224 LOC105371045A0A1W2PR82 267 aa23.59■■□□□ 1.37
FOXRED2-204ENST00000397224 TRIM26Q12899 539 aaPredicted RBP23.58■■□□□ 1.36
FOXRED2-204ENST00000397224 HRCP23327 699 aa23.48■■□□□ 1.35
FOXRED2-204ENST00000397224 YTHDC1Q96MU7 727 aaKnown RBP23.32■■□□□ 1.32
FOXRED2-204ENST00000397224 ITGAEP38570 1179 aa23.06■■□□□ 1.28
FOXRED2-204ENST00000397224 HNRNPUL2Q1KMD3 747 aaKnown RBP23.05■■□□□ 1.28
FOXRED2-204ENST00000397224 ERICH6Q7L0X2 663 aa23.02■■□□□ 1.28
FOXRED2-204ENST00000397224 NEFLP07196 543 aa23■■□□□ 1.27
FOXRED2-204ENST00000397224 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.92■■□□□ 1.26
FOXRED2-204ENST00000397224 ABCC9O60706 1549 aa22.88■■□□□ 1.25
FOXRED2-204ENST00000397224 PABPN1Q86U42 306 aaKnown RBP eCLIP22.79■■□□□ 1.24
FOXRED2-204ENST00000397224 DIEXFQ68CQ4 756 aaKnown RBP22.67■■□□□ 1.22
FOXRED2-204ENST00000397224 POLR3GLQ9BT43 218 aa22.6■■□□□ 1.21
FOXRED2-204ENST00000397224 CNGB1Q14028 1251 aaPredicted RBP22.48■■□□□ 1.19
FOXRED2-204ENST00000397224 FAM50AQ14320 339 aaKnown RBP22.48■■□□□ 1.19
FOXRED2-204ENST00000397224 MYT1Q01538 1121 aa22.47■■□□□ 1.19
FOXRED2-204ENST00000397224 MYT1LQ9UL68 1186 aa22.43■■□□□ 1.18
FOXRED2-204ENST00000397224 ZCCHC6Q5VYS8 1495 aaKnown RBP22.39■■□□□ 1.18
FOXRED2-204ENST00000397224 CSRNP3Q8WYN3 585 aa22.33■■□□□ 1.17
FOXRED2-204ENST00000397224 NEUROD1Q13562 356 aa22.32■■□□□ 1.16
FOXRED2-204ENST00000397224 TRIM52Q96A61 297 aa22.25■■□□□ 1.15
FOXRED2-204ENST00000397224 GTF3C3Q9Y5Q9 886 aa22.21■■□□□ 1.15
FOXRED2-204ENST00000397224 ZNF316A6NFI3 1004 aaPredicted RBP22.2■■□□□ 1.14
FOXRED2-204ENST00000397224 SCRIBQ14160 1630 aa22.17■■□□□ 1.14
FOXRED2-204ENST00000397224 DAXXQ9UER7 740 aaPredicted RBP22.11■■□□□ 1.13
FOXRED2-204ENST00000397224 P3H3Q8IVL6 736 aa22.1■■□□□ 1.13
FOXRED2-204ENST00000397224 DCAF1Q9Y4B6 1507 aa22.07■■□□□ 1.12
FOXRED2-204ENST00000397224 BCANQ96GW7 911 aa22.02■■□□□ 1.12
FOXRED2-204ENST00000397224 ANP32CO43423 234 aa22.02■■□□□ 1.12
FOXRED2-204ENST00000397224 SLC4A1APQ9BWU0 796 aaKnown RBP21.99■■□□□ 1.11
FOXRED2-204ENST00000397224 ZNF326Q5BKZ1 582 aaKnown RBP21.98■■□□□ 1.11
FOXRED2-204ENST00000397224 ACIN1Q9UKV3 1341 aaKnown RBP21.97■■□□□ 1.11
FOXRED2-204ENST00000397224 FBLN2P98095 1184 aa21.95■■□□□ 1.1
FOXRED2-204ENST00000397224 CCDC180Q9P1Z9 1646 aa21.93■■□□□ 1.1
FOXRED2-204ENST00000397224 ARID3CA6NKF2 412 aa21.92■■□□□ 1.1
FOXRED2-204ENST00000397224 MYO15BQ96JP2 1530 aa21.86■■□□□ 1.09
FOXRED2-204ENST00000397224 CLSPNQ9HAW4 1339 aa21.79■■□□□ 1.08
FOXRED2-204ENST00000397224 RSF1Q96T23 1441 aaPredicted RBP21.73■■□□□ 1.07
FOXRED2-204ENST00000397224 RTL5Q5HYW3 569 aaPredicted RBP21.73■■□□□ 1.07
FOXRED2-204ENST00000397224 ZNF777Q9ULD5 760 aaPredicted RBP21.7■■□□□ 1.06
FOXRED2-204ENST00000397224 CDK11AQ9UQ88 783 aaPredicted RBP21.69■■□□□ 1.06
FOXRED2-204ENST00000397224 TONSLQ96HA7 1378 aa21.6■■□□□ 1.05
FOXRED2-204ENST00000397224 DDX10Q13206 875 aaKnown RBP21.6■■□□□ 1.05
FOXRED2-204ENST00000397224 CLIP1P30622 1438 aa21.56■■□□□ 1.04
FOXRED2-204ENST00000397224 CHIC2Q9UKJ5 165 aa21.5■■□□□ 1.03
FOXRED2-204ENST00000397224 FKBP8Q14318 412 aa21.49■■□□□ 1.03
FOXRED2-204ENST00000397224 CEP162Q5TB80 1403 aa21.47■■□□□ 1.03
FOXRED2-204ENST00000397224 MIER1Q8N108 512 aa21.46■■□□□ 1.03
FOXRED2-204ENST00000397224 HNRNPUQ00839 825 aaKnown RBP eCLIP21.45■■□□□ 1.02
FOXRED2-204ENST00000397224 RB1CC1Q8TDY2 1594 aa21.42■■□□□ 1.02
FOXRED2-204ENST00000397224 EEA1Q15075 1411 aa21.42■■□□□ 1.02
FOXRED2-204ENST00000397224 SCAF1Q9H7N4 1312 aaKnown RBP21.4■■□□□ 1.02
FOXRED2-204ENST00000397224 GOLGA3Q08378 1498 aa21.4■■□□□ 1.02
FOXRED2-204ENST00000397224 FAM9BQ8IZU0 186 aa21.38■■□□□ 1.01
FOXRED2-204ENST00000397224 CANXP27824 592 aaKnown RBP21.38■■□□□ 1.01
FOXRED2-204ENST00000397224 WRNQ14191 1432 aaPredicted RBP eCLIP21.37■■□□□ 1.01
FOXRED2-204ENST00000397224 MTUS2Q5JR59 1369 aa21.37■■□□□ 1.01
FOXRED2-204ENST00000397224 HIRIP3Q9BW71 556 aaPredicted RBP21.35■■□□□ 1.01
FOXRED2-204ENST00000397224 NACADO15069 1562 aa21.32■■□□□ 1
FOXRED2-204ENST00000397224 TNIKQ9UKE5 1360 aa21.31■■□□□ 1
FOXRED2-204ENST00000397224 ANP32AP39687 249 aaKnown RBP21.27■■□□□ 1
FOXRED2-204ENST00000397224 CECR2Q9BXF3 1484 aa21.27■■□□□ 1
FOXRED2-204ENST00000397224 ZBTB47Q9UFB7 747 aaPredicted RBP21.26■□□□□ 0.99
FOXRED2-204ENST00000397224 BCL11AQ9H165 835 aa21.25■□□□□ 0.99
FOXRED2-204ENST00000397224 SALL2Q9Y467 1007 aaPredicted RBP21.23■□□□□ 0.99
FOXRED2-204ENST00000397224 NPM2Q86SE8 214 aaKnown RBP21.23■□□□□ 0.99
FOXRED2-204ENST00000397224 RRP7BPQ9NSQ0 103 aa21.23■□□□□ 0.99
FOXRED2-204ENST00000397224 NEFMP07197 916 aa21.22■□□□□ 0.99
FOXRED2-204ENST00000397224 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.22■□□□□ 0.99
FOXRED2-204ENST00000397224 CHGAP10645 457 aaKnown RBP21.21■□□□□ 0.99
FOXRED2-204ENST00000397224 BAZ1BQ9UIG0 1483 aaKnown RBP21.21■□□□□ 0.99
FOXRED2-204ENST00000397224 TSPY4P0CV99 314 aa21.2■□□□□ 0.98
FOXRED2-204ENST00000397224 TSPY10P0CW01 314 aa21.2■□□□□ 0.98
FOXRED2-204ENST00000397224 TMC1Q8TDI8 760 aa21.19■□□□□ 0.98
FOXRED2-204ENST00000397224 MRS2Q9HD23 443 aa21.19■□□□□ 0.98
FOXRED2-204ENST00000397224 KDM2AQ9Y2K7 1162 aa21.19■□□□□ 0.98
FOXRED2-204ENST00000397224 CEP164Q9UPV0 1460 aa21.19■□□□□ 0.98
FOXRED2-204ENST00000397224 CHMP7Q8WUX9 453 aaPredicted RBP21.15■□□□□ 0.98
FOXRED2-204ENST00000397224 KIF27Q86VH2 1401 aa21.14■□□□□ 0.98
FOXRED2-204ENST00000397224 BAZ1AQ9NRL2 1556 aaPredicted RBP21.14■□□□□ 0.97
FOXRED2-204ENST00000397224 SLC24A1O60721 1099 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms