Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.36■□□□□ 0.211e-7■■■□□ 16.3
NCBP2P52298 COPS6-207ENST00000472107 835 ntTSL 216.02■□□□□ 0.161e-7■■■□□ 16.3
NCBP2P52298 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.85■□□□□ 0.131e-7■■■□□ 16.3
NCBP2P52298 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.85■□□□□ 0.131e-7■■■□□ 16.3
NCBP2P52298 COPS6-203ENST00000419210 218 ntTSL 315.73■□□□□ 0.111e-7■■■□□ 16.3
NCBP2P52298 COPS6-206ENST00000468499 745 ntTSL 315.65■□□□□ 0.11e-7■■■□□ 16.3
NCBP2P52298 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.051e-7■■■□□ 16.3
NCBP2P52298 COPS6-205ENST00000465027 1171 ntTSL 1 (best)14.52□□□□□ -0.091e-7■■■□□ 16.3
NCBP2P52298 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.191e-7■■■□□ 16.3
NCBP2P52298 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.76□□□□□ -0.211e-7■■■□□ 16.3
NCBP2P52298 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC12.6□□□□□ -0.391e-7■■■□□ 16.3
NCBP2P52298 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC11.72□□□□□ -0.531e-7■■■□□ 16.3
NCBP2P52298 RPS15A-206ENST00000569083 1022 ntTSL 2 BASIC10.41□□□□□ -0.741e-7■■■□□ 16.3
NCBP2P52298 TRAPPC3-206ENST00000469757 221 ntTSL 27.66□□□□□ -1.181e-7■■■□□ 16.3
NCBP2P52298 RPS2-217ENST00000563194 170 ntTSL 52.13□□□□□ -2.071e-7■■■□□ 16.3
NCBP2P52298 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.765e-7■■■□□ 16.3
NCBP2P52298 TFRC-204ENST00000421258 524 ntTSL 311.28□□□□□ -0.63e-10■■■□□ 16.3
NCBP2P52298 TFRC-208ENST00000464011 546 ntTSL 48.77□□□□□ -1.013e-10■■■□□ 16.3
NCBP2P52298 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.183e-7■■■□□ 16.3
NCBP2P52298 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.387e-7■■■□□ 16.3
NCBP2P52298 ARID3A-205ENST00000587532 1016 ntTSL 516.49■□□□□ 0.237e-7■■■□□ 16.3
NCBP2P52298 ARID3A-202ENST00000457152 549 ntTSL 511.85□□□□□ -0.517e-7■■■□□ 16.3
NCBP2P52298 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.62■□□□□ 0.094e-6■■■□□ 16.3
NCBP2P52298 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.432e-6■■■□□ 16.3
NCBP2P52298 CORO7-PAM16-203ENST00000575334 3815 ntTSL 216.81■□□□□ 0.289e-8■■■□□ 16.3
NCBP2P52298 PAM16-205ENST00000571986 606 ntTSL 316.01■□□□□ 0.159e-8■■■□□ 16.3
NCBP2P52298 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.19■□□□□ 0.029e-8■■■□□ 16.3
NCBP2P52298 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.049e-8■■■□□ 16.3
NCBP2P52298 CORO7-PAM16-201ENST00000572274 672 ntTSL 514.72□□□□□ -0.059e-8■■■□□ 16.3
NCBP2P52298 PAM16-209ENST00000573614 650 ntTSL 514.27□□□□□ -0.139e-8■■■□□ 16.3
NCBP2P52298 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.259e-8■■■□□ 16.3
NCBP2P52298 PAM16-202ENST00000571178 353 ntTSL 313.22□□□□□ -0.299e-8■■■□□ 16.3
NCBP2P52298 PAM16-213ENST00000575942 806 ntTSL 312.23□□□□□ -0.459e-8■■■□□ 16.3
NCBP2P52298 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.489e-8■■■□□ 16.3
NCBP2P52298 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.342e-9■■■□□ 16.3
NCBP2P52298 CCNB1IP1-205ENST00000398169 1631 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.779e-13■■■□□ 16.2
NCBP2P52298 CCNB1IP1-203ENST00000398160 1613 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.839e-13■■■□□ 16.2
NCBP2P52298 CCNB1IP1-204ENST00000398163 1604 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.939e-13■■■□□ 16.2
NCBP2P52298 CCNB1IP1-215ENST00000557114 756 ntTSL 56.18□□□□□ -1.429e-13■■■□□ 16.2
NCBP2P52298 CCNB1IP1-213ENST00000556563 646 ntTSL 35.85□□□□□ -1.479e-13■■■□□ 16.2
NCBP2P52298 CCNB1IP1-207ENST00000553291 392 ntTSL 31.29□□□□□ -2.29e-13■■■□□ 16.2
NCBP2P52298 NT5C-206ENST00000579023 726 ntTSL 320.74■□□□□ 0.912e-8■■■□□ 16.2
NCBP2P52298 NT5C-213ENST00000583655 1315 ntTSL 219.17■□□□□ 0.662e-8■■■□□ 16.2
NCBP2P52298 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.552e-8■■■□□ 16.2
NCBP2P52298 NT5C-209ENST00000580758 958 ntTSL 217.05■□□□□ 0.322e-8■■■□□ 16.2
NCBP2P52298 NT5C-207ENST00000579082 503 ntTSL 316.66■□□□□ 0.262e-8■■■□□ 16.2
NCBP2P52298 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.46■□□□□ 0.232e-8■■■□□ 16.2
NCBP2P52298 NT5C-205ENST00000578407 720 ntTSL 316.45■□□□□ 0.222e-8■■■□□ 16.2
NCBP2P52298 NT5C-203ENST00000578095 648 ntTSL 314.38□□□□□ -0.112e-8■■■□□ 16.2
NCBP2P52298 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.522e-8■■■□□ 16.2
NCBP2P52298 VEGFA-211ENST00000476772 1683 ntTSL 1 (best)27.2■■□□□ 1.942e-27■■■□□ 16.2
NCBP2P52298 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.192e-27■■■□□ 16.2
NCBP2P52298 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.714e-7■■■□□ 16.2
NCBP2P52298 MTIF2-206ENST00000412530 580 ntTSL 311.88□□□□□ -0.515e-16■■■□□ 16.2
NCBP2P52298 DHX35-202ENST00000373323 2347 ntTSL 2 BASIC10.39□□□□□ -0.752e-6■■■□□ 16.2
NCBP2P52298 DHX35-203ENST00000373325 3287 ntTSL 5 BASIC9.07□□□□□ -0.962e-6■■■□□ 16.2
NCBP2P52298 DHX35-206ENST00000484417 3318 ntTSL 28.13□□□□□ -1.112e-6■■■□□ 16.2
NCBP2P52298 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.22e-6■■■□□ 16.2
NCBP2P52298 MCM8-203ENST00000378886 3835 ntTSL 1 (best) BASIC8.6□□□□□ -1.036e-7■■■□□ 16.2
NCBP2P52298 MCM8-204ENST00000378896 3769 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.066e-7■■■□□ 16.2
NCBP2P52298 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.076e-7■■■□□ 16.2
NCBP2P52298 MCM8-202ENST00000378883 3574 ntTSL 1 (best) BASIC8□□□□□ -1.136e-7■■■□□ 16.2
NCBP2P52298 RHBG-202ENST00000467375 923 ntTSL 312.93□□□□□ -0.347e-14■■■□□ 16.2
NCBP2P52298 CDC42SE2-207ENST00000504701 567 ntTSL 420.6■□□□□ 0.892e-12■■■□□ 16.2
NCBP2P52298 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.12■□□□□ 0.652e-12■■■□□ 16.2
NCBP2P52298 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.282e-12■■■□□ 16.2
NCBP2P52298 CDC42SE2-209ENST00000506419 458 ntTSL 313.08□□□□□ -0.322e-12■■■□□ 16.2
NCBP2P52298 CDC42SE2-208ENST00000505065 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.182e-12■■■□□ 16.2
NCBP2P52298 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.62e-12■■■□□ 16.2
NCBP2P52298 CDC42SE2-211ENST00000511432 286 ntTSL 53.08□□□□□ -1.922e-12■■■□□ 16.2
NCBP2P52298 CDC42SE2-205ENST00000502840 539 ntTSL 42.85□□□□□ -1.952e-12■■■□□ 16.2
NCBP2P52298 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.242e-7■■■□□ 16.2
NCBP2P52298 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.382e-7■■■□□ 16.2
NCBP2P52298 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.672e-6■■■□□ 16.2
NCBP2P52298 TCIRG1-215ENST00000533947 956 ntTSL 519.19■□□□□ 0.661e-8■■■□□ 16.2
NCBP2P52298 TCIRG1-209ENST00000529657 842 ntTSL 518.51■□□□□ 0.551e-8■■■□□ 16.2
NCBP2P52298 TCIRG1-202ENST00000524598 940 ntTSL 516.13■□□□□ 0.171e-8■■■□□ 16.2
NCBP2P52298 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.433e-6■■■□□ 16.1
NCBP2P52298 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.163e-6■■■□□ 16.1
NCBP2P52298 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.25■□□□□ 0.033e-6■■■□□ 16.1
NCBP2P52298 BAIAP2-209ENST00000572329 2133 ntTSL 214.74□□□□□ -0.053e-6■■■□□ 16.1
NCBP2P52298 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.193e-6■■■□□ 16.1
NCBP2P52298 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.213e-6■■■□□ 16.1
NCBP2P52298 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.423e-6■■■□□ 16.1
NCBP2P52298 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.61■□□□□ 0.571e-6■■■□□ 16.1
NCBP2P52298 RER1-201ENST00000306256 695 ntTSL 518.57■□□□□ 0.561e-6■■■□□ 16.1
NCBP2P52298 RER1-208ENST00000493207 686 ntTSL 215.67■□□□□ 0.11e-6■■■□□ 16.1
NCBP2P52298 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.59■□□□□ 0.091e-6■■■□□ 16.1
NCBP2P52298 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.55□□□□□ -0.081e-6■■■□□ 16.1
NCBP2P52298 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.111e-6■■■□□ 16.1
NCBP2P52298 R3HDM1-215ENST00000483021 539 ntTSL 317.65■□□□□ 0.423e-9■■■□□ 16.1
NCBP2P52298 R3HDM1-213ENST00000463230 2241 ntTSL 212.05□□□□□ -0.483e-9■■■□□ 16.1
NCBP2P52298 R3HDM1-208ENST00000438014 582 ntTSL 57.14□□□□□ -1.273e-9■■■□□ 16.1
NCBP2P52298 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.34□□□□□ -1.553e-9■■■□□ 16.1
NCBP2P52298 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.653e-9■■■□□ 16.1
NCBP2P52298 R3HDM1-219ENST00000488035 502 ntTSL 31.77□□□□□ -2.133e-9■■■□□ 16.1
NCBP2P52298 CHD4-213ENST00000545584 553 ntTSL 418.12■□□□□ 0.498e-7■■■□□ 16.1
NCBP2P52298 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC12.05□□□□□ -0.487e-12■■■□□ 16.1
NCBP2P52298 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC11.32□□□□□ -0.67e-12■■■□□ 16.1
NCBP2P52298 LYRM4-207ENST00000480566 941 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.947e-12■■■□□ 16.1
Retrieved 100 of 18,329 protein–RNA pairs in 460.2 ms