RNA–Protein interactions for RNA: ENST00000472107.5

COPS6-207, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 835 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-207ENST00000472107 NISCHQ9Y2I1 1504 aa46.06■■■■■ 4.96
COPS6-207ENST00000472107 ABCC9O60706 1549 aa42.28■■■■■ 4.36
COPS6-207ENST00000472107 CCDC180Q9P1Z9 1646 aa41.55■■■■■ 4.24
COPS6-207ENST00000472107 DNAJC5BQ9UF47 199 aa40.2■■■■■ 4.03
COPS6-207ENST00000472107 RB1CC1Q8TDY2 1594 aa39.93■■■■□ 3.98
COPS6-207ENST00000472107 NACADO15069 1562 aa39.49■■■■□ 3.91
COPS6-207ENST00000472107 DCAF8L2P0C7V8 631 aa39.35■■■■□ 3.89
COPS6-207ENST00000472107 PABPN1Q86U42 306 aaKnown RBP eCLIP39.32■■■■□ 3.89
COPS6-207ENST00000472107 UNC13AQ9UPW8 1703 aa38.89■■■■□ 3.82
COPS6-207ENST00000472107 BICRAQ9NZM4 1560 aa38.71■■■■□ 3.79
COPS6-207ENST00000472107 MYO15BQ96JP2 1530 aa38.7■■■■□ 3.79
COPS6-207ENST00000472107 SHROOM4Q9ULL8 1493 aa38.19■■■■□ 3.7
COPS6-207ENST00000472107 CECR2Q9BXF3 1484 aa38.16■■■■□ 3.7
COPS6-207ENST00000472107 CC2D2AQ9P2K1 1620 aa38.1■■■■□ 3.69
COPS6-207ENST00000472107 ZCCHC6Q5VYS8 1495 aaKnown RBP38.01■■■■□ 3.67
COPS6-207ENST00000472107 DCAF1Q9Y4B6 1507 aa37.97■■■■□ 3.67
COPS6-207ENST00000472107 SCRIBQ14160 1630 aa37.88■■■■□ 3.65
COPS6-207ENST00000472107 EIF4G1Q04637 1599 aaKnown RBP37.87■■■■□ 3.65
COPS6-207ENST00000472107 DNAJC5Q9H3Z4 198 aa37.43■■■■□ 3.58
COPS6-207ENST00000472107 CUX2O14529 1486 aa36.69■■■■□ 3.46
COPS6-207ENST00000472107 ERCC6Q03468 1493 aa36.61■■■■□ 3.45
COPS6-207ENST00000472107 NCAPD3P42695 1498 aa36.48■■■■□ 3.43
COPS6-207ENST00000472107 ATAD2BQ9ULI0 1458 aa36.28■■■■□ 3.4
COPS6-207ENST00000472107 SMARCA2P51531 1590 aa36.15■■■■□ 3.38
COPS6-207ENST00000472107 HMGXB3Q12766 1538 aa36.12■■■■□ 3.37
COPS6-207ENST00000472107 NESP48681 1621 aa36.1■■■■□ 3.37
COPS6-207ENST00000472107 SMARCA4P51532 1647 aa36.04■■■■□ 3.36
COPS6-207ENST00000472107 BAZ1BQ9UIG0 1483 aaKnown RBP35.92■■■■□ 3.34
COPS6-207ENST00000472107 BAZ1AQ9NRL2 1556 aaPredicted RBP35.81■■■■□ 3.32
COPS6-207ENST00000472107 THOC2Q8NI27 1593 aaKnown RBP35.81■■■■□ 3.32
COPS6-207ENST00000472107 LAMC3Q9Y6N6 1575 aa35.74■■■■□ 3.31
COPS6-207ENST00000472107 PEG3Q9GZU2 1588 aa35.67■■■■□ 3.3
COPS6-207ENST00000472107 PDS5BQ9NTI5 1447 aa35.64■■■■□ 3.3
COPS6-207ENST00000472107 TRIM41Q8WV44 630 aa35.61■■■■□ 3.29
COPS6-207ENST00000472107 KIF21AQ7Z4S6 1674 aa35.56■■■■□ 3.28
COPS6-207ENST00000472107 MROH2BQ7Z745 1585 aa35.47■■■■□ 3.27
COPS6-207ENST00000472107 CADPSQ9ULU8 1353 aa35.38■■■■□ 3.25
COPS6-207ENST00000472107 MRC2Q9UBG0 1479 aa35.33■■■■□ 3.25
COPS6-207ENST00000472107 WDR62O43379 1518 aa35.21■■■■□ 3.23
COPS6-207ENST00000472107 CEP164Q9UPV0 1460 aa35.07■■■■□ 3.2
COPS6-207ENST00000472107 OSCARQ8IYS5 282 aa35■■■■□ 3.19
COPS6-207ENST00000472107 WIZO95785 1651 aa35■■■■□ 3.19
COPS6-207ENST00000472107 FANCD2Q9BXW9 1451 aa34.97■■■■□ 3.19
COPS6-207ENST00000472107 CFTRP13569 1480 aa34.8■■■■□ 3.16
COPS6-207ENST00000472107 URB2Q14146 1524 aaKnown RBP34.68■■■■□ 3.14
COPS6-207ENST00000472107 TOP2AP11388 1531 aaKnown RBP34.54■■■■□ 3.12
COPS6-207ENST00000472107 RSF1Q96T23 1441 aaPredicted RBP34.54■■■■□ 3.12
COPS6-207ENST00000472107 RIMBP3CA6NJZ7 1639 aa34.48■■■■□ 3.11
COPS6-207ENST00000472107 RIMBP3BA6NNM3 1639 aa34.48■■■■□ 3.11
COPS6-207ENST00000472107 RIMBP3Q9UFD9 1639 aa34.48■■■■□ 3.11
COPS6-207ENST00000472107 IFT140Q96RY7 1462 aa34.39■■■■□ 3.1
COPS6-207ENST00000472107 ZNF608Q9ULD9 1512 aaPredicted RBP34.37■■■■□ 3.09
COPS6-207ENST00000472107 ARHGEF11O15085 1522 aa34.34■■■■□ 3.09
COPS6-207ENST00000472107 PRDM2Q13029 1718 aa34.29■■■■□ 3.08
COPS6-207ENST00000472107 CYB5RLQ6IPT4 315 aa34.23■■■■□ 3.07
COPS6-207ENST00000472107 TOPBP1Q92547 1522 aa34.2■■■■□ 3.07
COPS6-207ENST00000472107 CCDC88BA6NC98 1476 aa34.17■■■■□ 3.06
COPS6-207ENST00000472107 ABCC8Q09428 1581 aa34.14■■■■□ 3.06
COPS6-207ENST00000472107 EIF4G3O43432 1585 aaKnown RBP34.11■■■■□ 3.05
COPS6-207ENST00000472107 TRHP20396 242 aaPredicted RBP34.11■■■■□ 3.05
COPS6-207ENST00000472107 FBLN2P98095 1184 aa34.04■■■■□ 3.04
COPS6-207ENST00000472107 DNMBPQ6XZF7 1577 aa34.02■■■■□ 3.04
COPS6-207ENST00000472107 AQRO60306 1485 aaKnown RBP eCLIP34.01■■■■□ 3.04
COPS6-207ENST00000472107 CHD1O14646 1710 aa33.96■■■■□ 3.03
COPS6-207ENST00000472107 ARAP1Q96P48 1450 aa33.95■■■■□ 3.02
COPS6-207ENST00000472107 TARBP1Q13395 1621 aaKnown RBP33.9■■■■□ 3.02
COPS6-207ENST00000472107 POLA1P09884 1462 aaPredicted RBP33.82■■■■□ 3
COPS6-207ENST00000472107 TDRD9Q8NDG6 1382 aaKnown RBP33.73■■■□□ 2.99
COPS6-207ENST00000472107 RAD54L2Q9Y4B4 1467 aa33.73■■■□□ 2.99
COPS6-207ENST00000472107 SOGA1O94964 1423 aa33.7■■■□□ 2.99
COPS6-207ENST00000472107 CHMP7Q8WUX9 453 aaPredicted RBP33.66■■■□□ 2.98
COPS6-207ENST00000472107 SNAPC4Q5SXM2 1469 aa33.63■■■□□ 2.97
COPS6-207ENST00000472107 AEBP2Q6ZN18 517 aaPredicted RBP33.61■■■□□ 2.97
COPS6-207ENST00000472107 CLASP1Q7Z460 1538 aa33.57■■■□□ 2.96
COPS6-207ENST00000472107 SYNJ1O43426 1573 aa33.55■■■□□ 2.96
COPS6-207ENST00000472107 WDR97A6NE52 1622 aa33.53■■■□□ 2.96
COPS6-207ENST00000472107 FGD5Q6ZNL6 1462 aa33.53■■■□□ 2.96
COPS6-207ENST00000472107 MAGI1Q96QZ7 1491 aaPredicted RBP33.52■■■□□ 2.96
COPS6-207ENST00000472107 GRIN2BQ13224 1484 aa33.47■■■□□ 2.95
COPS6-207ENST00000472107 SYNJ2O15056 1496 aa33.43■■■□□ 2.94
COPS6-207ENST00000472107 CUX1P39880 1505 aa33.37■■■□□ 2.93
COPS6-207ENST00000472107 GAPVD1Q14C86 1478 aa33.33■■■□□ 2.93
COPS6-207ENST00000472107 PBRM1Q86U86 1689 aa33.2■■■□□ 2.9
COPS6-207ENST00000472107 ABCA10Q8WWZ4 1543 aa33.1■■■□□ 2.89
COPS6-207ENST00000472107 ABCA5Q8WWZ7 1642 aa33.06■■■□□ 2.88
COPS6-207ENST00000472107 GRIN2AQ12879 1464 aa33.02■■■□□ 2.88
COPS6-207ENST00000472107 ERCC6L2Q5T890 1561 aa33■■■□□ 2.87
COPS6-207ENST00000472107 CEP170Q5SW79 1584 aa32.93■■■□□ 2.86
COPS6-207ENST00000472107 NUP160Q12769 1436 aa32.92■■■□□ 2.86
COPS6-207ENST00000472107 WRNQ14191 1432 aaPredicted RBP eCLIP32.91■■■□□ 2.86
COPS6-207ENST00000472107 ADAMTS12P58397 1594 aa32.87■■■□□ 2.85
COPS6-207ENST00000472107 FHAD1B1AJZ9 1412 aa32.83■■■□□ 2.85
COPS6-207ENST00000472107 SHROOM2Q13796 1616 aa32.78■■■□□ 2.84
COPS6-207ENST00000472107 PRG4Q92954 1404 aaPredicted RBP32.71■■■□□ 2.83
COPS6-207ENST00000472107 KIF13AQ9H1H9 1805 aa32.68■■■□□ 2.82
COPS6-207ENST00000472107 ERICH3Q5RHP9 1530 aa32.67■■■□□ 2.82
COPS6-207ENST00000472107 SUPT5HO00267 1087 aaKnown RBP32.67■■■□□ 2.82
COPS6-207ENST00000472107 JPH4Q96JJ6 628 aa32.66■■■□□ 2.82
COPS6-207ENST00000472107 TOP2BQ02880 1626 aa32.66■■■□□ 2.82
COPS6-207ENST00000472107 NPM1P06748 294 aaKnown RBP eCLIP32.63■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms