RNA–Protein interactions for RNA: ENST00000571986.5

PAM16-205, Transcript of presequence translocase associated motor 16, humanhuman

TSL 3

Gene PAM16, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAM16-205ENST00000571986 NISCHQ9Y2I1 1504 aa43.11■■■■■ 4.49
PAM16-205ENST00000571986 CCDC180Q9P1Z9 1646 aa38.41■■■■□ 3.74
PAM16-205ENST00000571986 ABCC9O60706 1549 aa37.8■■■■□ 3.64
PAM16-205ENST00000571986 RB1CC1Q8TDY2 1594 aa36.18■■■■□ 3.38
PAM16-205ENST00000571986 NACADO15069 1562 aa36.08■■■■□ 3.37
PAM16-205ENST00000571986 DCAF8L2P0C7V8 631 aa35.97■■■■□ 3.35
PAM16-205ENST00000571986 ZCCHC6Q5VYS8 1495 aaKnown RBP35.89■■■■□ 3.34
PAM16-205ENST00000571986 MYO15BQ96JP2 1530 aa35.77■■■■□ 3.32
PAM16-205ENST00000571986 UNC13AQ9UPW8 1703 aa35.63■■■■□ 3.29
PAM16-205ENST00000571986 DCAF1Q9Y4B6 1507 aa35.58■■■■□ 3.29
PAM16-205ENST00000571986 PABPN1Q86U42 306 aaKnown RBP eCLIP35.28■■■■□ 3.24
PAM16-205ENST00000571986 BICRAQ9NZM4 1560 aa35.28■■■■□ 3.24
PAM16-205ENST00000571986 SCRIBQ14160 1630 aa35.12■■■■□ 3.21
PAM16-205ENST00000571986 DNAJC5BQ9UF47 199 aa34.95■■■■□ 3.19
PAM16-205ENST00000571986 SHROOM4Q9ULL8 1493 aa34.61■■■■□ 3.13
PAM16-205ENST00000571986 EIF4G1Q04637 1599 aaKnown RBP34.27■■■■□ 3.08
PAM16-205ENST00000571986 CC2D2AQ9P2K1 1620 aa34.2■■■■□ 3.07
PAM16-205ENST00000571986 CECR2Q9BXF3 1484 aa33.93■■■■□ 3.02
PAM16-205ENST00000571986 SMARCA4P51532 1647 aa33.54■■■□□ 2.96
PAM16-205ENST00000571986 BAZ1AQ9NRL2 1556 aaPredicted RBP33.36■■■□□ 2.93
PAM16-205ENST00000571986 ATAD2BQ9ULI0 1458 aa33.34■■■□□ 2.93
PAM16-205ENST00000571986 NCAPD3P42695 1498 aa33.31■■■□□ 2.92
PAM16-205ENST00000571986 MROH2BQ7Z745 1585 aa33.3■■■□□ 2.92
PAM16-205ENST00000571986 SMARCA2P51531 1590 aa33.22■■■□□ 2.91
PAM16-205ENST00000571986 PEG3Q9GZU2 1588 aa33.17■■■□□ 2.9
PAM16-205ENST00000571986 HMGXB3Q12766 1538 aa33.15■■■□□ 2.9
PAM16-205ENST00000571986 BAZ1BQ9UIG0 1483 aaKnown RBP33.02■■■□□ 2.88
PAM16-205ENST00000571986 WIZO95785 1651 aa32.97■■■□□ 2.87
PAM16-205ENST00000571986 RSF1Q96T23 1441 aaPredicted RBP32.78■■■□□ 2.84
PAM16-205ENST00000571986 NESP48681 1621 aa32.73■■■□□ 2.83
PAM16-205ENST00000571986 TOP2AP11388 1531 aaKnown RBP32.5■■■□□ 2.79
PAM16-205ENST00000571986 ERCC6Q03468 1493 aa32.48■■■□□ 2.79
PAM16-205ENST00000571986 LAMC3Q9Y6N6 1575 aa32.46■■■□□ 2.79
PAM16-205ENST00000571986 KIF21AQ7Z4S6 1674 aa32.37■■■□□ 2.77
PAM16-205ENST00000571986 CADPSQ9ULU8 1353 aa32.3■■■□□ 2.76
PAM16-205ENST00000571986 THOC2Q8NI27 1593 aaKnown RBP32.27■■■□□ 2.76
PAM16-205ENST00000571986 CUX2O14529 1486 aa32.18■■■□□ 2.74
PAM16-205ENST00000571986 PDS5BQ9NTI5 1447 aa32.16■■■□□ 2.74
PAM16-205ENST00000571986 CCDC88BA6NC98 1476 aa32.13■■■□□ 2.73
PAM16-205ENST00000571986 CFTRP13569 1480 aa32.12■■■□□ 2.73
PAM16-205ENST00000571986 FANCD2Q9BXW9 1451 aa31.98■■■□□ 2.71
PAM16-205ENST00000571986 PRDM2Q13029 1718 aa31.97■■■□□ 2.71
PAM16-205ENST00000571986 MRC2Q9UBG0 1479 aa31.95■■■□□ 2.7
PAM16-205ENST00000571986 CEP164Q9UPV0 1460 aa31.93■■■□□ 2.7
PAM16-205ENST00000571986 WDR62O43379 1518 aa31.9■■■□□ 2.7
PAM16-205ENST00000571986 URB2Q14146 1524 aaKnown RBP31.77■■■□□ 2.68
PAM16-205ENST00000571986 SUPT5HO00267 1087 aaKnown RBP31.75■■■□□ 2.67
PAM16-205ENST00000571986 TOPBP1Q92547 1522 aa31.49■■■□□ 2.63
PAM16-205ENST00000571986 DNAJC5Q9H3Z4 198 aa31.43■■■□□ 2.62
PAM16-205ENST00000571986 DNMBPQ6XZF7 1577 aa31.42■■■□□ 2.62
PAM16-205ENST00000571986 ABCC8Q09428 1581 aa31.29■■■□□ 2.6
PAM16-205ENST00000571986 ZNF608Q9ULD9 1512 aaPredicted RBP31.29■■■□□ 2.6
PAM16-205ENST00000571986 IFT140Q96RY7 1462 aa31.25■■■□□ 2.59
PAM16-205ENST00000571986 CUX1P39880 1505 aa31.24■■■□□ 2.59
PAM16-205ENST00000571986 TARBP1Q13395 1621 aaKnown RBP31.23■■■□□ 2.59
PAM16-205ENST00000571986 POLA1P09884 1462 aaPredicted RBP31.21■■■□□ 2.59
PAM16-205ENST00000571986 EIF4G3O43432 1585 aaKnown RBP31.14■■■□□ 2.58
PAM16-205ENST00000571986 RAD54L2Q9Y4B4 1467 aa31.13■■■□□ 2.57
PAM16-205ENST00000571986 FGD5Q6ZNL6 1462 aa31.12■■■□□ 2.57
PAM16-205ENST00000571986 AQRO60306 1485 aaKnown RBP eCLIP31.02■■■□□ 2.562e-8■■■■■ 38.1
PAM16-205ENST00000571986 SOGA1O94964 1423 aa30.99■■■□□ 2.55
PAM16-205ENST00000571986 WDR97A6NE52 1622 aa30.98■■■□□ 2.55
PAM16-205ENST00000571986 SYNJ1O43426 1573 aa30.95■■■□□ 2.54
PAM16-205ENST00000571986 TDRD9Q8NDG6 1382 aaKnown RBP30.92■■■□□ 2.54
PAM16-205ENST00000571986 BIVM-ERCC5R4GMW8 1640 aa30.91■■■□□ 2.54
PAM16-205ENST00000571986 TOP2BQ02880 1626 aa30.87■■■□□ 2.53
PAM16-205ENST00000571986 WRNQ14191 1432 aaPredicted RBP eCLIP30.85■■■□□ 2.53
PAM16-205ENST00000571986 CHD1O14646 1710 aa30.84■■■□□ 2.53
PAM16-205ENST00000571986 ABCA10Q8WWZ4 1543 aa30.76■■■□□ 2.51
PAM16-205ENST00000571986 OSCARQ8IYS5 282 aa30.75■■■□□ 2.51
PAM16-205ENST00000571986 PBRM1Q86U86 1689 aa30.74■■■□□ 2.51
PAM16-205ENST00000571986 ABCA5Q8WWZ7 1642 aa30.74■■■□□ 2.51
PAM16-205ENST00000571986 SNAPC4Q5SXM2 1469 aa30.72■■■□□ 2.51
PAM16-205ENST00000571986 GRIN2BQ13224 1484 aa30.66■■■□□ 2.5
PAM16-205ENST00000571986 GAPVD1Q14C86 1478 aa30.66■■■□□ 2.5
PAM16-205ENST00000571986 MAGI1Q96QZ7 1491 aaPredicted RBP30.59■■■□□ 2.49
PAM16-205ENST00000571986 FBLN2P98095 1184 aa30.56■■■□□ 2.48
PAM16-205ENST00000571986 RIMBP3CA6NJZ7 1639 aa30.51■■■□□ 2.48
PAM16-205ENST00000571986 RIMBP3BA6NNM3 1639 aa30.51■■■□□ 2.48
PAM16-205ENST00000571986 RIMBP3Q9UFD9 1639 aa30.51■■■□□ 2.48
PAM16-205ENST00000571986 SYNJ2O15056 1496 aa30.5■■■□□ 2.47
PAM16-205ENST00000571986 ADAMTS12P58397 1594 aa30.45■■■□□ 2.47
PAM16-205ENST00000571986 ARHGEF11O15085 1522 aa30.43■■■□□ 2.46
PAM16-205ENST00000571986 CLASP1Q7Z460 1538 aa30.43■■■□□ 2.46
PAM16-205ENST00000571986 CHMP7Q8WUX9 453 aaPredicted RBP30.41■■■□□ 2.46
PAM16-205ENST00000571986 ERICH3Q5RHP9 1530 aa30.36■■■□□ 2.45
PAM16-205ENST00000571986 TRIM41Q8WV44 630 aa30.35■■■□□ 2.45
PAM16-205ENST00000571986 GRIN2AQ12879 1464 aa30.31■■■□□ 2.44
PAM16-205ENST00000571986 CEP170Q5SW79 1584 aa30.28■■■□□ 2.44
PAM16-205ENST00000571986 FHAD1B1AJZ9 1412 aa30.26■■■□□ 2.43
PAM16-205ENST00000571986 ARAP1Q96P48 1450 aa30.21■■■□□ 2.43
PAM16-205ENST00000571986 NUP160Q12769 1436 aa30.19■■■□□ 2.42
PAM16-205ENST00000571986 KIF27Q86VH2 1401 aa30.16■■■□□ 2.42
PAM16-205ENST00000571986 IGF1RP08069 1367 aa30.14■■■□□ 2.41
PAM16-205ENST00000571986 ERCC6L2Q5T890 1561 aa30.11■■■□□ 2.41
PAM16-205ENST00000571986 CUL7Q14999 1698 aa30.07■■■□□ 2.41
PAM16-205ENST00000571986 RUSC2Q8N2Y8 1516 aa30.07■■■□□ 2.4
PAM16-205ENST00000571986 CYB5RLQ6IPT4 315 aa30.06■■■□□ 2.4
PAM16-205ENST00000571986 SHROOM2Q13796 1616 aa30.06■■■□□ 2.4
PAM16-205ENST00000571986 CARMIL1Q5VZK9 1371 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms