RNA–Protein interactions for RNA: ENST00000480566.5

LYRM4-207, Transcript of LYR motif containing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LYRM4, Length 941 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4-207ENST00000480566 AEBP2Q6ZN18 517 aaPredicted RBP31.05■■■□□ 2.56
LYRM4-207ENST00000480566 CHIC1Q5VXU3 224 aa29.81■■■□□ 2.36
LYRM4-207ENST00000480566 SENP3Q9H4L4 574 aaPredicted RBP26.54■■□□□ 1.84
LYRM4-207ENST00000480566 PHF23Q9BUL5 403 aaPredicted RBP26.19■■□□□ 1.78
LYRM4-207ENST00000480566 FOXD1Q16676 465 aa24.64■■□□□ 1.54
LYRM4-207ENST00000480566 PLPPR3Q6T4P5 718 aa23.99■■□□□ 1.43
LYRM4-207ENST00000480566 NISCHQ9Y2I1 1504 aa23.41■■□□□ 1.34
LYRM4-207ENST00000480566 PPP6R1Q9UPN7 881 aa23.21■■□□□ 1.31
LYRM4-207ENST00000480566 ADRA2BP18089 450 aa23.2■■□□□ 1.3
LYRM4-207ENST00000480566 PIAS4Q8N2W9 510 aaPredicted RBP23.17■■□□□ 1.3
LYRM4-207ENST00000480566 MSH5O43196 834 aa23.03■■□□□ 1.28
LYRM4-207ENST00000480566 POTEDQ86YR6 584 aa21.94■■□□□ 1.1
LYRM4-207ENST00000480566 SCAF1Q9H7N4 1312 aaKnown RBP21.31■■□□□ 1
LYRM4-207ENST00000480566 MAPK8IP2Q13387 824 aaPredicted RBP21.2■□□□□ 0.98
LYRM4-207ENST00000480566 DMRT2Q9Y5R5 561 aa21.06■□□□□ 0.96
LYRM4-207ENST00000480566 PPP4R3CPQ6ZMV5 832 aa21.04■□□□□ 0.96
LYRM4-207ENST00000480566 CCDC180Q9P1Z9 1646 aa20.69■□□□□ 0.9
LYRM4-207ENST00000480566 CNKSR2Q8WXI2 1034 aa20.6■□□□□ 0.89
LYRM4-207ENST00000480566 NCBP3Q53F19 620 aaKnown RBP20.38■□□□□ 0.85
LYRM4-207ENST00000480566 HOXD11P31277 338 aaPredicted RBP20.37■□□□□ 0.85
LYRM4-207ENST00000480566 RNF216Q9NWF9 866 aaPredicted RBP20.33■□□□□ 0.85
LYRM4-207ENST00000480566 DCAF8L1A6NGE4 600 aa20.28■□□□□ 0.84
LYRM4-207ENST00000480566 NPM3O75607 178 aaKnown RBP20.01■□□□□ 0.79
LYRM4-207ENST00000480566 KCNA4P22459 653 aa19.87■□□□□ 0.77
LYRM4-207ENST00000480566 ABCC9O60706 1549 aa19.83■□□□□ 0.77
LYRM4-207ENST00000480566 ZCCHC6Q5VYS8 1495 aaKnown RBP19.62■□□□□ 0.73
LYRM4-207ENST00000480566 RNF39Q9H2S5 420 aa19.62■□□□□ 0.73
LYRM4-207ENST00000480566 DNAJC5BQ9UF47 199 aa19.62■□□□□ 0.73
LYRM4-207ENST00000480566 CACNB1Q02641 598 aaPredicted RBP19.6■□□□□ 0.73
LYRM4-207ENST00000480566 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.49■□□□□ 0.71
LYRM4-207ENST00000480566 DCAF1Q9Y4B6 1507 aa19.41■□□□□ 0.7
LYRM4-207ENST00000480566 C1QBPQ07021 282 aaKnown RBP19.38■□□□□ 0.69
LYRM4-207ENST00000480566 MYO15BQ96JP2 1530 aa19.35■□□□□ 0.69
LYRM4-207ENST00000480566 NACADO15069 1562 aa19.32■□□□□ 0.68
LYRM4-207ENST00000480566 RB1CC1Q8TDY2 1594 aa19.24■□□□□ 0.67
LYRM4-207ENST00000480566 DCAF8L2P0C7V8 631 aa19.21■□□□□ 0.67
LYRM4-207ENST00000480566 U3KPZ7 1027 aaPredicted RBP19.06■□□□□ 0.64
LYRM4-207ENST00000480566 SLC4A2P04920 1241 aa19■□□□□ 0.63
LYRM4-207ENST00000480566 SCRIBQ14160 1630 aa18.9■□□□□ 0.62
LYRM4-207ENST00000480566 SLC4A1APQ9BWU0 796 aaKnown RBP18.87■□□□□ 0.61
LYRM4-207ENST00000480566 UNC13AQ9UPW8 1703 aa18.87■□□□□ 0.61
LYRM4-207ENST00000480566 CAPN15O75808 1086 aa18.72■□□□□ 0.59
LYRM4-207ENST00000480566 BICRAQ9NZM4 1560 aa18.72■□□□□ 0.59
LYRM4-207ENST00000480566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.7■□□□□ 0.58
LYRM4-207ENST00000480566 HNRNPUL2Q1KMD3 747 aaKnown RBP18.7■□□□□ 0.58
LYRM4-207ENST00000480566 SPINK5Q9NQ38 1064 aaPredicted RBP18.69■□□□□ 0.58
LYRM4-207ENST00000480566 APLP2Q06481 763 aa18.68■□□□□ 0.58
LYRM4-207ENST00000480566 SHROOM4Q9ULL8 1493 aa18.66■□□□□ 0.58
LYRM4-207ENST00000480566 SAMD1Q6SPF0 538 aaPredicted RBP18.58■□□□□ 0.56
LYRM4-207ENST00000480566 MYCNP04198 464 aaPredicted RBP18.56■□□□□ 0.56
LYRM4-207ENST00000480566 PABPN1Q86U42 306 aaKnown RBP eCLIP18.54■□□□□ 0.56
LYRM4-207ENST00000480566 FOXD4L1Q9NU39 408 aa18.5■□□□□ 0.55
LYRM4-207ENST00000480566 TRHP20396 242 aaPredicted RBP18.48■□□□□ 0.55
LYRM4-207ENST00000480566 DSG3P32926 999 aa18.47■□□□□ 0.55
LYRM4-207ENST00000480566 ZNF219Q9P2Y4 722 aaPredicted RBP18.47■□□□□ 0.55
LYRM4-207ENST00000480566 ABCB7O75027 752 aa18.29■□□□□ 0.52
LYRM4-207ENST00000480566 ZBTB22O15209 634 aa18.23■□□□□ 0.51
LYRM4-207ENST00000480566 CECR2Q9BXF3 1484 aa18.2■□□□□ 0.5
LYRM4-207ENST00000480566 EIF4G1Q04637 1599 aaKnown RBP18.17■□□□□ 0.5
LYRM4-207ENST00000480566 BAZ1AQ9NRL2 1556 aaPredicted RBP18.12■□□□□ 0.49
LYRM4-207ENST00000480566 SMARCA4P51532 1647 aa18.12■□□□□ 0.49
LYRM4-207ENST00000480566 MROH2BQ7Z745 1585 aa18.07■□□□□ 0.48
LYRM4-207ENST00000480566 ATF5Q9Y2D1 282 aaPredicted RBP18.01■□□□□ 0.47
LYRM4-207ENST00000480566 POLA2Q14181 598 aa18■□□□□ 0.47
LYRM4-207ENST00000480566 CC2D2AQ9P2K1 1620 aa17.98■□□□□ 0.47
LYRM4-207ENST00000480566 RSF1Q96T23 1441 aaPredicted RBP17.97■□□□□ 0.47
LYRM4-207ENST00000480566 PEG3Q9GZU2 1588 aa17.94■□□□□ 0.46
LYRM4-207ENST00000480566 ATXN8OSP0DMR3 200 aa17.9■□□□□ 0.46
LYRM4-207ENST00000480566 WIZO95785 1651 aa17.89■□□□□ 0.45
LYRM4-207ENST00000480566 ATAD2BQ9ULI0 1458 aa17.88■□□□□ 0.45
LYRM4-207ENST00000480566 SMARCA2P51531 1590 aa17.87■□□□□ 0.45
LYRM4-207ENST00000480566 HMGXB3Q12766 1538 aa17.81■□□□□ 0.44
LYRM4-207ENST00000480566 NCAPD3P42695 1498 aa17.81■□□□□ 0.44
LYRM4-207ENST00000480566 BAZ1BQ9UIG0 1483 aaKnown RBP17.75■□□□□ 0.43
LYRM4-207ENST00000480566 ZBTB12Q9Y330 459 aaPredicted RBP17.74■□□□□ 0.43
LYRM4-207ENST00000480566 TOP2AP11388 1531 aaKnown RBP17.73■□□□□ 0.43
LYRM4-207ENST00000480566 RBM42Q9BTD8 480 aaKnown RBP17.71■□□□□ 0.43
LYRM4-207ENST00000480566 EHMT2Q96KQ7 1210 aa17.67■□□□□ 0.42
LYRM4-207ENST00000480566 SUPT5HO00267 1087 aaKnown RBP17.66■□□□□ 0.42
LYRM4-207ENST00000480566 CSRNP3Q8WYN3 585 aa17.66■□□□□ 0.42
LYRM4-207ENST00000480566 CCDC88BA6NC98 1476 aa17.47■□□□□ 0.39
LYRM4-207ENST00000480566 OSCARQ8IYS5 282 aa17.44■□□□□ 0.38
LYRM4-207ENST00000480566 FBLN2P98095 1184 aa17.42■□□□□ 0.38
LYRM4-207ENST00000480566 AKT1S1Q96B36 256 aa17.31■□□□□ 0.36
LYRM4-207ENST00000480566 NESP48681 1621 aa17.3■□□□□ 0.36
LYRM4-207ENST00000480566 CFTRP13569 1480 aa17.3■□□□□ 0.36
LYRM4-207ENST00000480566 LAMC3Q9Y6N6 1575 aa17.29■□□□□ 0.36
LYRM4-207ENST00000480566 POTEHQ6S545 545 aa17.28■□□□□ 0.36
LYRM4-207ENST00000480566 CADPSQ9ULU8 1353 aa17.28■□□□□ 0.36
LYRM4-207ENST00000480566 PRDM2Q13029 1718 aa17.24■□□□□ 0.35
LYRM4-207ENST00000480566 MKRN4PQ13434 485 aaPredicted RBP17.2■□□□□ 0.34
LYRM4-207ENST00000480566 SPDYE2BA6NHP3 402 aa17.17■□□□□ 0.34
LYRM4-207ENST00000480566 SPDYE6P0CI01 402 aa17.17■□□□□ 0.34
LYRM4-207ENST00000480566 SPDYE2Q495Y8 402 aa17.17■□□□□ 0.34
LYRM4-207ENST00000480566 CHRDL2Q6WN34 429 aa17.15■□□□□ 0.34
LYRM4-207ENST00000480566 REM2Q8IYK8 340 aaPredicted RBP17.13■□□□□ 0.33
LYRM4-207ENST00000480566 KIF21AQ7Z4S6 1674 aa17.13■□□□□ 0.33
LYRM4-207ENST00000480566 FANCD2Q9BXW9 1451 aa17.12■□□□□ 0.33
LYRM4-207ENST00000480566 PDS5BQ9NTI5 1447 aa17.11■□□□□ 0.33
LYRM4-207ENST00000480566 CEP164Q9UPV0 1460 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms