RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 NISCHQ9Y2I1 1504 aa40.31■■■■■ 4.04
TRAPPC3-203ENST00000373163 ABCC9O60706 1549 aa37.2■■■■□ 3.55
TRAPPC3-203ENST00000373163 CCDC180Q9P1Z9 1646 aa36.41■■■■□ 3.42
TRAPPC3-203ENST00000373163 DNAJC5BQ9UF47 199 aa35.54■■■■□ 3.28
TRAPPC3-203ENST00000373163 RB1CC1Q8TDY2 1594 aa35.06■■■■□ 3.2
TRAPPC3-203ENST00000373163 NACADO15069 1562 aa34.65■■■■□ 3.14
TRAPPC3-203ENST00000373163 PABPN1Q86U42 306 aaKnown RBP eCLIP34.55■■■■□ 3.12
TRAPPC3-203ENST00000373163 DCAF8L2P0C7V8 631 aa34.38■■■■□ 3.09
TRAPPC3-203ENST00000373163 UNC13AQ9UPW8 1703 aa34.13■■■■□ 3.05
TRAPPC3-203ENST00000373163 BICRAQ9NZM4 1560 aa34.05■■■■□ 3.04
TRAPPC3-203ENST00000373163 MYO15BQ96JP2 1530 aa33.94■■■■□ 3.02
TRAPPC3-203ENST00000373163 CECR2Q9BXF3 1484 aa33.6■■■□□ 2.97
TRAPPC3-203ENST00000373163 SHROOM4Q9ULL8 1493 aa33.56■■■□□ 2.96
TRAPPC3-203ENST00000373163 CC2D2AQ9P2K1 1620 aa33.53■■■□□ 2.96
TRAPPC3-203ENST00000373163 EIF4G1Q04637 1599 aaKnown RBP33.3■■■□□ 2.92
TRAPPC3-203ENST00000373163 ZCCHC6Q5VYS8 1495 aaKnown RBP33.26■■■□□ 2.92
TRAPPC3-203ENST00000373163 DCAF1Q9Y4B6 1507 aa33.24■■■□□ 2.91
TRAPPC3-203ENST00000373163 SCRIBQ14160 1630 aa33.18■■■□□ 2.9
TRAPPC3-203ENST00000373163 DNAJC5Q9H3Z4 198 aa33.17■■■□□ 2.9
TRAPPC3-203ENST00000373163 CUX2O14529 1486 aa32.35■■■□□ 2.77
TRAPPC3-203ENST00000373163 ERCC6Q03468 1493 aa32.19■■■□□ 2.74
TRAPPC3-203ENST00000373163 NCAPD3P42695 1498 aa32.03■■■□□ 2.72
TRAPPC3-203ENST00000373163 ATAD2BQ9ULI0 1458 aa31.83■■■□□ 2.69
TRAPPC3-203ENST00000373163 NESP48681 1621 aa31.74■■■□□ 2.67
TRAPPC3-203ENST00000373163 HMGXB3Q12766 1538 aa31.7■■■□□ 2.66
TRAPPC3-203ENST00000373163 SMARCA2P51531 1590 aa31.68■■■□□ 2.66
TRAPPC3-203ENST00000373163 SMARCA4P51532 1647 aa31.57■■■□□ 2.64
TRAPPC3-203ENST00000373163 THOC2Q8NI27 1593 aaKnown RBP31.53■■■□□ 2.64
TRAPPC3-203ENST00000373163 BAZ1BQ9UIG0 1483 aaKnown RBP31.48■■■□□ 2.63
TRAPPC3-203ENST00000373163 TRIM41Q8WV44 630 aa31.44■■■□□ 2.62
TRAPPC3-203ENST00000373163 LAMC3Q9Y6N6 1575 aa31.38■■■□□ 2.61
TRAPPC3-203ENST00000373163 BAZ1AQ9NRL2 1556 aaPredicted RBP31.33■■■□□ 2.61
TRAPPC3-203ENST00000373163 PEG3Q9GZU2 1588 aa31.27■■■□□ 2.6
TRAPPC3-203ENST00000373163 PDS5BQ9NTI5 1447 aa31.27■■■□□ 2.6
TRAPPC3-203ENST00000373163 KIF21AQ7Z4S6 1674 aa31.22■■■□□ 2.59
TRAPPC3-203ENST00000373163 MROH2BQ7Z745 1585 aa31.05■■■□□ 2.56
TRAPPC3-203ENST00000373163 MRC2Q9UBG0 1479 aa31.04■■■□□ 2.56
TRAPPC3-203ENST00000373163 CADPSQ9ULU8 1353 aa31.03■■■□□ 2.56
TRAPPC3-203ENST00000373163 WDR62O43379 1518 aa30.97■■■□□ 2.55
TRAPPC3-203ENST00000373163 OSCARQ8IYS5 282 aa30.78■■■□□ 2.52
TRAPPC3-203ENST00000373163 CEP164Q9UPV0 1460 aa30.77■■■□□ 2.52
TRAPPC3-203ENST00000373163 FANCD2Q9BXW9 1451 aa30.68■■■□□ 2.5
TRAPPC3-203ENST00000373163 WIZO95785 1651 aa30.6■■■□□ 2.49
TRAPPC3-203ENST00000373163 CFTRP13569 1480 aa30.51■■■□□ 2.48
TRAPPC3-203ENST00000373163 URB2Q14146 1524 aaKnown RBP30.46■■■□□ 2.47
TRAPPC3-203ENST00000373163 RIMBP3CA6NJZ7 1639 aa30.4■■■□□ 2.46
TRAPPC3-203ENST00000373163 RIMBP3BA6NNM3 1639 aa30.4■■■□□ 2.46
TRAPPC3-203ENST00000373163 RIMBP3Q9UFD9 1639 aa30.4■■■□□ 2.46
TRAPPC3-203ENST00000373163 ARHGEF11O15085 1522 aa30.27■■■□□ 2.44
TRAPPC3-203ENST00000373163 TOP2AP11388 1531 aaKnown RBP30.21■■■□□ 2.43
TRAPPC3-203ENST00000373163 ZNF608Q9ULD9 1512 aaPredicted RBP30.21■■■□□ 2.43
TRAPPC3-203ENST00000373163 IFT140Q96RY7 1462 aa30.19■■■□□ 2.42
TRAPPC3-203ENST00000373163 RSF1Q96T23 1441 aaPredicted RBP30.17■■■□□ 2.42
TRAPPC3-203ENST00000373163 CYB5RLQ6IPT4 315 aa30.12■■■□□ 2.41
TRAPPC3-203ENST00000373163 TRHP20396 242 aaPredicted RBP30.03■■■□□ 2.4
TRAPPC3-203ENST00000373163 TOPBP1Q92547 1522 aa30■■■□□ 2.39
TRAPPC3-203ENST00000373163 PRDM2Q13029 1718 aa29.99■■■□□ 2.39
TRAPPC3-203ENST00000373163 EIF4G3O43432 1585 aaKnown RBP29.97■■■□□ 2.39
TRAPPC3-203ENST00000373163 ARAP1Q96P48 1450 aa29.93■■■□□ 2.38
TRAPPC3-203ENST00000373163 CCDC88BA6NC98 1476 aa29.88■■■□□ 2.37
TRAPPC3-203ENST00000373163 ABCC8Q09428 1581 aa29.88■■■□□ 2.37
TRAPPC3-203ENST00000373163 AQRO60306 1485 aaKnown RBP eCLIP29.85■■■□□ 2.375e-8■■■■■ 40.7
TRAPPC3-203ENST00000373163 FBLN2P98095 1184 aa29.82■■■□□ 2.36
TRAPPC3-203ENST00000373163 CHD1O14646 1710 aa29.82■■■□□ 2.36
TRAPPC3-203ENST00000373163 DNMBPQ6XZF7 1577 aa29.81■■■□□ 2.36
TRAPPC3-203ENST00000373163 TARBP1Q13395 1621 aaKnown RBP29.74■■■□□ 2.35
TRAPPC3-203ENST00000373163 AEBP2Q6ZN18 517 aaPredicted RBP29.68■■■□□ 2.34
TRAPPC3-203ENST00000373163 POLA1P09884 1462 aaPredicted RBP29.66■■■□□ 2.34
TRAPPC3-203ENST00000373163 RAD54L2Q9Y4B4 1467 aa29.56■■■□□ 2.32
TRAPPC3-203ENST00000373163 TDRD9Q8NDG6 1382 aaKnown RBP29.56■■■□□ 2.32
TRAPPC3-203ENST00000373163 CLASP1Q7Z460 1538 aa29.53■■■□□ 2.32
TRAPPC3-203ENST00000373163 SNAPC4Q5SXM2 1469 aa29.53■■■□□ 2.32
TRAPPC3-203ENST00000373163 SOGA1O94964 1423 aa29.52■■■□□ 2.32
TRAPPC3-203ENST00000373163 CHMP7Q8WUX9 453 aaPredicted RBP29.48■■■□□ 2.31
TRAPPC3-203ENST00000373163 SYNJ1O43426 1573 aa29.45■■■□□ 2.31
TRAPPC3-203ENST00000373163 MAGI1Q96QZ7 1491 aaPredicted RBP29.41■■■□□ 2.3
TRAPPC3-203ENST00000373163 WDR97A6NE52 1622 aa29.4■■■□□ 2.3
TRAPPC3-203ENST00000373163 FGD5Q6ZNL6 1462 aa29.36■■■□□ 2.29
TRAPPC3-203ENST00000373163 GRIN2BQ13224 1484 aa29.34■■■□□ 2.29
TRAPPC3-203ENST00000373163 SYNJ2O15056 1496 aa29.33■■■□□ 2.29
TRAPPC3-203ENST00000373163 GAPVD1Q14C86 1478 aa29.29■■■□□ 2.28
TRAPPC3-203ENST00000373163 CUX1P39880 1505 aa29.22■■■□□ 2.27
TRAPPC3-203ENST00000373163 PBRM1Q86U86 1689 aa29.08■■■□□ 2.25
TRAPPC3-203ENST00000373163 ERCC6L2Q5T890 1561 aa29.02■■■□□ 2.24
TRAPPC3-203ENST00000373163 ABCA10Q8WWZ4 1543 aa28.99■■■□□ 2.23
TRAPPC3-203ENST00000373163 ABCA5Q8WWZ7 1642 aa28.98■■■□□ 2.23
TRAPPC3-203ENST00000373163 GRIN2AQ12879 1464 aa28.96■■■□□ 2.23
TRAPPC3-203ENST00000373163 CEP170Q5SW79 1584 aa28.92■■■□□ 2.22
TRAPPC3-203ENST00000373163 NUP160Q12769 1436 aa28.9■■■□□ 2.22
TRAPPC3-203ENST00000373163 ADAMTS12P58397 1594 aa28.83■■■□□ 2.21
TRAPPC3-203ENST00000373163 SHROOM2Q13796 1616 aa28.8■■■□□ 2.2
TRAPPC3-203ENST00000373163 WRNQ14191 1432 aaPredicted RBP eCLIP28.76■■■□□ 2.19
TRAPPC3-203ENST00000373163 FHAD1B1AJZ9 1412 aa28.75■■■□□ 2.19
TRAPPC3-203ENST00000373163 KIF13AQ9H1H9 1805 aa28.73■■■□□ 2.19
TRAPPC3-203ENST00000373163 PRG4Q92954 1404 aaPredicted RBP28.69■■■□□ 2.18
TRAPPC3-203ENST00000373163 FAM69CQ0P6D2 419 aa28.65■■■□□ 2.18
TRAPPC3-203ENST00000373163 ABCC10Q5T3U5 1492 aa28.63■■■□□ 2.17
TRAPPC3-203ENST00000373163 JPH4Q96JJ6 628 aa28.61■■■□□ 2.17
TRAPPC3-203ENST00000373163 ERICH3Q5RHP9 1530 aa28.6■■■□□ 2.17
TRAPPC3-203ENST00000373163 NPM1P06748 294 aaKnown RBP eCLIP28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms