RNA–Protein interactions for RNA: ENST00000536461.5

KDM4B-203, Transcript of lysine demethylase 4B, humanhuman

TSL 1 (best) BASIC

Gene KDM4B, Length 5,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-203ENST00000536461 DCAF8L2P0C7V8 631 aa29.07■■■□□ 2.24
KDM4B-203ENST00000536461 NISCHQ9Y2I1 1504 aa28.19■■■□□ 2.1
KDM4B-203ENST00000536461 SUPT5HO00267 1087 aaKnown RBP26.84■■□□□ 1.89
KDM4B-203ENST00000536461 SHROOM4Q9ULL8 1493 aa26.64■■□□□ 1.85
KDM4B-203ENST00000536461 EHMT2Q96KQ7 1210 aa25.78■■□□□ 1.72
KDM4B-203ENST00000536461 FAM9AQ8IZU1 332 aaPredicted RBP25.66■■□□□ 1.7
KDM4B-203ENST00000536461 APLP2Q06481 763 aa25.49■■□□□ 1.67
KDM4B-203ENST00000536461 PELP1Q8IZL8 1130 aaKnown RBP25.17■■□□□ 1.62
KDM4B-203ENST00000536461 PCGF6Q9BYE7 350 aa25.12■■□□□ 1.61
KDM4B-203ENST00000536461 TRIM41Q8WV44 630 aa25■■□□□ 1.59
KDM4B-203ENST00000536461 RANGAP1P46060 587 aaPredicted RBP24.99■■□□□ 1.59
KDM4B-203ENST00000536461 ATP1B4Q9UN42 357 aaPredicted RBP24.89■■□□□ 1.57
KDM4B-203ENST00000536461 ABCC9O60706 1549 aa24.87■■□□□ 1.57
KDM4B-203ENST00000536461 TTBK1Q5TCY1 1321 aaPredicted RBP24.76■■□□□ 1.55
KDM4B-203ENST00000536461 UBTFP17480 764 aaKnown RBP24.74■■□□□ 1.55
KDM4B-203ENST00000536461 ZEB1P37275 1124 aaPredicted RBP24.7■■□□□ 1.54
KDM4B-203ENST00000536461 CENPBP07199 599 aaPredicted RBP24.67■■□□□ 1.54
KDM4B-203ENST00000536461 MYT1Q01538 1121 aa24.62■■□□□ 1.53
KDM4B-203ENST00000536461 PABPN1Q86U42 306 aaKnown RBP eCLIP24.6■■□□□ 1.53
KDM4B-203ENST00000536461 HRCP23327 699 aa24.4■■□□□ 1.5
KDM4B-203ENST00000536461 CCER1Q8TC90 406 aaPredicted RBP24.29■■□□□ 1.48
KDM4B-203ENST00000536461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.28■■□□□ 1.48
KDM4B-203ENST00000536461 HNRNPUL2Q1KMD3 747 aaKnown RBP24.28■■□□□ 1.48
KDM4B-203ENST00000536461 MYT1LQ9UL68 1186 aa24.21■■□□□ 1.47
KDM4B-203ENST00000536461 ERICH6Q7L0X2 663 aa24.11■■□□□ 1.45
KDM4B-203ENST00000536461 TRIM26Q12899 539 aaPredicted RBP24.03■■□□□ 1.44
KDM4B-203ENST00000536461 YTHDC1Q96MU7 727 aaKnown RBP23.98■■□□□ 1.43
KDM4B-203ENST00000536461 CHIC1Q5VXU3 224 aa23.87■■□□□ 1.41
KDM4B-203ENST00000536461 PPARGC1BQ86YN6 1023 aaKnown RBP23.84■■□□□ 1.41
KDM4B-203ENST00000536461 FBLN2P98095 1184 aa23.78■■□□□ 1.4
KDM4B-203ENST00000536461 NEFLP07196 543 aa23.75■■□□□ 1.39
KDM4B-203ENST00000536461 ITGAEP38570 1179 aa23.74■■□□□ 1.39
KDM4B-203ENST00000536461 LOC105371045A0A1W2PR82 267 aa23.57■■□□□ 1.36
KDM4B-203ENST00000536461 SCRIBQ14160 1630 aa23.5■■□□□ 1.35
KDM4B-203ENST00000536461 POLR3GLQ9BT43 218 aa23.32■■□□□ 1.32
KDM4B-203ENST00000536461 DIEXFQ68CQ4 756 aaKnown RBP23.31■■□□□ 1.32
KDM4B-203ENST00000536461 FAM50AQ14320 339 aaKnown RBP23.28■■□□□ 1.32
KDM4B-203ENST00000536461 CCDC180Q9P1Z9 1646 aa23.28■■□□□ 1.32
KDM4B-203ENST00000536461 ZCCHC6Q5VYS8 1495 aaKnown RBP23.22■■□□□ 1.31
KDM4B-203ENST00000536461 GTF3C3Q9Y5Q9 886 aa23.19■■□□□ 1.3
KDM4B-203ENST00000536461 RB1CC1Q8TDY2 1594 aa23.18■■□□□ 1.3
KDM4B-203ENST00000536461 TRIM52Q96A61 297 aa23.15■■□□□ 1.3
KDM4B-203ENST00000536461 SLC4A1APQ9BWU0 796 aaKnown RBP23.13■■□□□ 1.29
KDM4B-203ENST00000536461 P3H3Q8IVL6 736 aa23.11■■□□□ 1.29
KDM4B-203ENST00000536461 NPM1P06748 294 aaKnown RBP eCLIP23.1■■□□□ 1.29
KDM4B-203ENST00000536461 ARID3CA6NKF2 412 aa23.09■■□□□ 1.29
KDM4B-203ENST00000536461 CSRNP3Q8WYN3 585 aa23.07■■□□□ 1.28
KDM4B-203ENST00000536461 CDK11AQ9UQ88 783 aaPredicted RBP23.03■■□□□ 1.28
KDM4B-203ENST00000536461 ACIN1Q9UKV3 1341 aaKnown RBP22.97■■□□□ 1.27
KDM4B-203ENST00000536461 CNGB1Q14028 1251 aaPredicted RBP22.95■■□□□ 1.26
KDM4B-203ENST00000536461 ESF1Q9H501 851 aaKnown RBP22.92■■□□□ 1.26
KDM4B-203ENST00000536461 ZNF777Q9ULD5 760 aaPredicted RBP22.9■■□□□ 1.26
KDM4B-203ENST00000536461 NACADO15069 1562 aa22.88■■□□□ 1.25
KDM4B-203ENST00000536461 CHMP7Q8WUX9 453 aaPredicted RBP22.87■■□□□ 1.25
KDM4B-203ENST00000536461 BCANQ96GW7 911 aa22.87■■□□□ 1.25
KDM4B-203ENST00000536461 DAXXQ9UER7 740 aaPredicted RBP22.84■■□□□ 1.25
KDM4B-203ENST00000536461 ZNF326Q5BKZ1 582 aaKnown RBP22.76■■□□□ 1.23
KDM4B-203ENST00000536461 NEUROD1Q13562 356 aa22.76■■□□□ 1.23
KDM4B-203ENST00000536461 RTL5Q5HYW3 569 aaPredicted RBP22.76■■□□□ 1.23
KDM4B-203ENST00000536461 ZNF316A6NFI3 1004 aaPredicted RBP22.71■■□□□ 1.23
KDM4B-203ENST00000536461 PLPPR3Q6T4P5 718 aa22.64■■□□□ 1.21
KDM4B-203ENST00000536461 STAG3Q9UJ98 1225 aa22.6■■□□□ 1.21
KDM4B-203ENST00000536461 BAZ1BQ9UIG0 1483 aaKnown RBP22.6■■□□□ 1.21
KDM4B-203ENST00000536461 ERCC6Q03468 1493 aa22.59■■□□□ 1.21
KDM4B-203ENST00000536461 SCAF1Q9H7N4 1312 aaKnown RBP22.53■■□□□ 1.2
KDM4B-203ENST00000536461 DCAF1Q9Y4B6 1507 aa22.51■■□□□ 1.19
KDM4B-203ENST00000536461 CHGAP10645 457 aaKnown RBP22.51■■□□□ 1.19
KDM4B-203ENST00000536461 ANP32CO43423 234 aa22.48■■□□□ 1.19
KDM4B-203ENST00000536461 TSPY4P0CV99 314 aa22.42■■□□□ 1.18
KDM4B-203ENST00000536461 TSPY10P0CW01 314 aa22.42■■□□□ 1.18
KDM4B-203ENST00000536461 RSF1Q96T23 1441 aaPredicted RBP22.42■■□□□ 1.18
KDM4B-203ENST00000536461 CLSPNQ9HAW4 1339 aa22.38■■□□□ 1.17
KDM4B-203ENST00000536461 KCNH8Q96L42 1107 aa22.38■■□□□ 1.17
KDM4B-203ENST00000536461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.34■■□□□ 1.172e-6■■□□□ 11.4
KDM4B-203ENST00000536461 PLEKHD1A6NEE1 506 aa22.33■■□□□ 1.17
KDM4B-203ENST00000536461 MTUS2Q5JR59 1369 aa22.32■■□□□ 1.16
KDM4B-203ENST00000536461 NEFMP07197 916 aa22.32■■□□□ 1.16
KDM4B-203ENST00000536461 SLC24A1O60721 1099 aa22.3■■□□□ 1.16
KDM4B-203ENST00000536461 CHIC2Q9UKJ5 165 aa22.28■■□□□ 1.16
KDM4B-203ENST00000536461 BAZ1AQ9NRL2 1556 aaPredicted RBP22.27■■□□□ 1.16
KDM4B-203ENST00000536461 WRNQ14191 1432 aaPredicted RBP eCLIP22.26■■□□□ 1.154e-6■■■■■ 51
KDM4B-203ENST00000536461 EEA1Q15075 1411 aa22.23■■□□□ 1.15
KDM4B-203ENST00000536461 KIF27Q86VH2 1401 aa22.2■■□□□ 1.14
KDM4B-203ENST00000536461 ARID4BQ4LE39 1312 aaPredicted RBP22.17■■□□□ 1.14
KDM4B-203ENST00000536461 FKBP8Q14318 412 aa22.15■■□□□ 1.14
KDM4B-203ENST00000536461 TRHP20396 242 aaPredicted RBP22.15■■□□□ 1.14
KDM4B-203ENST00000536461 CECR2Q9BXF3 1484 aa22.12■■□□□ 1.13
KDM4B-203ENST00000536461 TONSLQ96HA7 1378 aa22.12■■□□□ 1.13
KDM4B-203ENST00000536461 CLIP1P30622 1438 aa22.12■■□□□ 1.13
KDM4B-203ENST00000536461 PDS5BQ9NTI5 1447 aa22.08■■□□□ 1.12
KDM4B-203ENST00000536461 ANP32AP39687 249 aaKnown RBP22.08■■□□□ 1.12
KDM4B-203ENST00000536461 ZBTB47Q9UFB7 747 aaPredicted RBP22.06■■□□□ 1.12
KDM4B-203ENST00000536461 PPP1R15AO75807 674 aaPredicted RBP22.03■■□□□ 1.12
KDM4B-203ENST00000536461 CFDP1Q9UEE9 299 aaPredicted RBP22.01■■□□□ 1.11
KDM4B-203ENST00000536461 GOLGA3Q08378 1498 aa22.01■■□□□ 1.11
KDM4B-203ENST00000536461 MYO15BQ96JP2 1530 aa21.99■■□□□ 1.11
KDM4B-203ENST00000536461 MIER1Q8N108 512 aa21.97■■□□□ 1.11
KDM4B-203ENST00000536461 SMARCA2P51531 1590 aa21.96■■□□□ 1.11
KDM4B-203ENST00000536461 KDM2AQ9Y2K7 1162 aa21.95■■□□□ 1.1
KDM4B-203ENST00000536461 CANXP27824 592 aaKnown RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms