RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 NISCHQ9Y2I1 1504 aa25.02■■□□□ 1.6
SCAF4-201ENST00000286835 DCAF8L2P0C7V8 631 aa23.47■■□□□ 1.35
SCAF4-201ENST00000286835 SHROOM4Q9ULL8 1493 aa23.01■■□□□ 1.27
SCAF4-201ENST00000286835 SUPT5HO00267 1087 aaKnown RBP22.96■■□□□ 1.27
SCAF4-201ENST00000286835 PCGF6Q9BYE7 350 aa22.15■■□□□ 1.14
SCAF4-201ENST00000286835 HRCP23327 699 aa21.88■■□□□ 1.09
SCAF4-201ENST00000286835 CHIC1Q5VXU3 224 aa21.77■■□□□ 1.08
SCAF4-201ENST00000286835 PPARGC1BQ86YN6 1023 aaKnown RBP21.77■■□□□ 1.08
SCAF4-201ENST00000286835 EHMT2Q96KQ7 1210 aa21.66■■□□□ 1.06
SCAF4-201ENST00000286835 LOC105371045A0A1W2PR82 267 aa21.58■■□□□ 1.04
SCAF4-201ENST00000286835 FAM9AQ8IZU1 332 aaPredicted RBP21.42■■□□□ 1.02
SCAF4-201ENST00000286835 MYO15BQ96JP2 1530 aa21.39■■□□□ 1.01
SCAF4-201ENST00000286835 TRIM26Q12899 539 aaPredicted RBP21.19■□□□□ 0.98
SCAF4-201ENST00000286835 ABCC9O60706 1549 aa21.09■□□□□ 0.97
SCAF4-201ENST00000286835 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
SCAF4-201ENST00000286835 ZCCHC6Q5VYS8 1495 aaKnown RBP21.07■□□□□ 0.96
SCAF4-201ENST00000286835 TTBK1Q5TCY1 1321 aaPredicted RBP20.99■□□□□ 0.95
SCAF4-201ENST00000286835 ZEB1P37275 1124 aaPredicted RBP20.94■□□□□ 0.94
SCAF4-201ENST00000286835 DCAF1Q9Y4B6 1507 aa20.77■□□□□ 0.92
SCAF4-201ENST00000286835 CCER1Q8TC90 406 aaPredicted RBP20.77■□□□□ 0.91
SCAF4-201ENST00000286835 PELP1Q8IZL8 1130 aaKnown RBP20.67■□□□□ 0.9
SCAF4-201ENST00000286835 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.64■□□□□ 0.9
SCAF4-201ENST00000286835 PABPN1Q86U42 306 aaKnown RBP eCLIP20.63■□□□□ 0.89
SCAF4-201ENST00000286835 CCDC180Q9P1Z9 1646 aa20.52■□□□□ 0.87
SCAF4-201ENST00000286835 SCAF1Q9H7N4 1312 aaKnown RBP20.51■□□□□ 0.87
SCAF4-201ENST00000286835 YTHDC1Q96MU7 727 aaKnown RBP20.46■□□□□ 0.87
SCAF4-201ENST00000286835 CENPBP07199 599 aaPredicted RBP20.45■□□□□ 0.86
SCAF4-201ENST00000286835 DIEXFQ68CQ4 756 aaKnown RBP20.33■□□□□ 0.85
SCAF4-201ENST00000286835 RANGAP1P46060 587 aaPredicted RBP20.31■□□□□ 0.84
SCAF4-201ENST00000286835 UBTFP17480 764 aaKnown RBP20.3■□□□□ 0.84
SCAF4-201ENST00000286835 GTF3C3Q9Y5Q9 886 aa20.29■□□□□ 0.84
SCAF4-201ENST00000286835 ACIN1Q9UKV3 1341 aaKnown RBP20.24■□□□□ 0.83
SCAF4-201ENST00000286835 NEUROD1Q13562 356 aa20.23■□□□□ 0.83
SCAF4-201ENST00000286835 SCRIBQ14160 1630 aa20.21■□□□□ 0.83
SCAF4-201ENST00000286835 RSF1Q96T23 1441 aaPredicted RBP20.18■□□□□ 0.82
SCAF4-201ENST00000286835 HNRNPUL2Q1KMD3 747 aaKnown RBP20.13■□□□□ 0.81
SCAF4-201ENST00000286835 APLP2Q06481 763 aa20.1■□□□□ 0.81
SCAF4-201ENST00000286835 RB1CC1Q8TDY2 1594 aa19.96■□□□□ 0.79
SCAF4-201ENST00000286835 ZNF316A6NFI3 1004 aaPredicted RBP19.9■□□□□ 0.78
SCAF4-201ENST00000286835 CECR2Q9BXF3 1484 aa19.82■□□□□ 0.76
SCAF4-201ENST00000286835 ATP1B4Q9UN42 357 aaPredicted RBP19.79■□□□□ 0.76
SCAF4-201ENST00000286835 MYT1Q01538 1121 aa19.75■□□□□ 0.75
SCAF4-201ENST00000286835 CSRNP3Q8WYN3 585 aa19.74■□□□□ 0.75
SCAF4-201ENST00000286835 MIER1Q8N108 512 aa19.73■□□□□ 0.75
SCAF4-201ENST00000286835 ITGAEP38570 1179 aa19.7■□□□□ 0.74
SCAF4-201ENST00000286835 NACADO15069 1562 aa19.68■□□□□ 0.74
SCAF4-201ENST00000286835 CEP162Q5TB80 1403 aa19.64■□□□□ 0.73
SCAF4-201ENST00000286835 MROH2BQ7Z745 1585 aa19.63■□□□□ 0.73
SCAF4-201ENST00000286835 SOGA1O94964 1423 aa19.53■□□□□ 0.72
SCAF4-201ENST00000286835 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
SCAF4-201ENST00000286835 WIZO95785 1651 aa19.5■□□□□ 0.71
SCAF4-201ENST00000286835 CCDC88BA6NC98 1476 aa19.48■□□□□ 0.71
SCAF4-201ENST00000286835 BCANQ96GW7 911 aa19.47■□□□□ 0.71
SCAF4-201ENST00000286835 TNIKQ9UKE5 1360 aa19.41■□□□□ 0.7
SCAF4-201ENST00000286835 RUSC2Q8N2Y8 1516 aa19.32■□□□□ 0.68
SCAF4-201ENST00000286835 CLIP1P30622 1438 aa19.31■□□□□ 0.68
SCAF4-201ENST00000286835 NEFLP07196 543 aa19.29■□□□□ 0.68
SCAF4-201ENST00000286835 GOLGA3Q08378 1498 aa19.28■□□□□ 0.68
SCAF4-201ENST00000286835 BAZ1AQ9NRL2 1556 aaPredicted RBP19.23■□□□□ 0.67
SCAF4-201ENST00000286835 WRNQ14191 1432 aaPredicted RBP eCLIP19.22■□□□□ 0.671e-8■■■■■ 41.8
SCAF4-201ENST00000286835 EEA1Q15075 1411 aa19.18■□□□□ 0.66
SCAF4-201ENST00000286835 FAM50AQ14320 339 aaKnown RBP19.18■□□□□ 0.66
SCAF4-201ENST00000286835 SUPT16HQ9Y5B9 1047 aaKnown RBP19.16■□□□□ 0.66
SCAF4-201ENST00000286835 DDX10Q13206 875 aaKnown RBP19.13■□□□□ 0.65
SCAF4-201ENST00000286835 FBLN2P98095 1184 aa19.13■□□□□ 0.65
SCAF4-201ENST00000286835 FKBP8Q14318 412 aa19.12■□□□□ 0.65
SCAF4-201ENST00000286835 HIRIP3Q9BW71 556 aaPredicted RBP19.12■□□□□ 0.65
SCAF4-201ENST00000286835 BAZ1BQ9UIG0 1483 aaKnown RBP19.11■□□□□ 0.65
SCAF4-201ENST00000286835 P3H3Q8IVL6 736 aa19.1■□□□□ 0.65
SCAF4-201ENST00000286835 CEP164Q9UPV0 1460 aa19.08■□□□□ 0.64
SCAF4-201ENST00000286835 ERICH6Q7L0X2 663 aa19.08■□□□□ 0.64
SCAF4-201ENST00000286835 TRIM52Q96A61 297 aa19.04■□□□□ 0.64
SCAF4-201ENST00000286835 KANK4Q5T7N3 995 aaPredicted RBP19.04■□□□□ 0.64
SCAF4-201ENST00000286835 TOP2AP11388 1531 aaKnown RBP19.03■□□□□ 0.64
SCAF4-201ENST00000286835 VPS8Q8N3P4 1428 aa19.02■□□□□ 0.63
SCAF4-201ENST00000286835 KCNH8Q96L42 1107 aa19.01■□□□□ 0.63
SCAF4-201ENST00000286835 CNGB1Q14028 1251 aaPredicted RBP18.99■□□□□ 0.63
SCAF4-201ENST00000286835 CLSPNQ9HAW4 1339 aa18.95■□□□□ 0.62
SCAF4-201ENST00000286835 ARID3CA6NKF2 412 aa18.95■□□□□ 0.62
SCAF4-201ENST00000286835 ANP32CO43423 234 aa18.95■□□□□ 0.62
SCAF4-201ENST00000286835 SMARCA2P51531 1590 aa18.94■□□□□ 0.62
SCAF4-201ENST00000286835 RAPGEF2Q9Y4G8 1499 aa18.93■□□□□ 0.62
SCAF4-201ENST00000286835 SIN3AQ96ST3 1273 aa18.92■□□□□ 0.62
SCAF4-201ENST00000286835 TSHZ2Q9NRE2 1034 aa18.92■□□□□ 0.62
SCAF4-201ENST00000286835 SMARCA4P51532 1647 aa18.89■□□□□ 0.61
SCAF4-201ENST00000286835 DHX57Q6P158 1386 aaKnown RBP18.88■□□□□ 0.61
SCAF4-201ENST00000286835 ANP32EQ9BTT0 268 aa18.87■□□□□ 0.61
SCAF4-201ENST00000286835 IRX6P78412 446 aaPredicted RBP18.85■□□□□ 0.61
SCAF4-201ENST00000286835 POLR3GLQ9BT43 218 aa18.79■□□□□ 0.6
SCAF4-201ENST00000286835 CCNB3Q8WWL7 1395 aa18.78■□□□□ 0.6
SCAF4-201ENST00000286835 HNRNPUQ00839 825 aaKnown RBP eCLIP18.76■□□□□ 0.59
SCAF4-201ENST00000286835 MYT1LQ9UL68 1186 aa18.75■□□□□ 0.59
SCAF4-201ENST00000286835 ATAD2BQ9ULI0 1458 aa18.73■□□□□ 0.59
SCAF4-201ENST00000286835 CDK11AQ9UQ88 783 aaPredicted RBP18.71■□□□□ 0.59
SCAF4-201ENST00000286835 RAB3GAP2Q9H2M9 1393 aa18.7■□□□□ 0.58
SCAF4-201ENST00000286835 EIF4G1Q04637 1599 aaKnown RBP18.69■□□□□ 0.58
SCAF4-201ENST00000286835 TONSLQ96HA7 1378 aa18.69■□□□□ 0.58
SCAF4-201ENST00000286835 SYNJ1O43426 1573 aa18.68■□□□□ 0.58
SCAF4-201ENST00000286835 KIF21BO75037 1637 aa18.68■□□□□ 0.58
SCAF4-201ENST00000286835 RBM19Q9Y4C8 960 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms