RNA–Protein interactions for RNA: ENST00000575942.1

PAM16-213, Transcript of presequence translocase associated motor 16, humanhuman

TSL 3

Gene PAM16, Length 806 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAM16-213ENST00000575942 NISCHQ9Y2I1 1504 aa33.74■■■□□ 2.99
PAM16-213ENST00000575942 CCDC180Q9P1Z9 1646 aa30.31■■■□□ 2.44
PAM16-213ENST00000575942 ABCC9O60706 1549 aa30.17■■■□□ 2.42
PAM16-213ENST00000575942 RB1CC1Q8TDY2 1594 aa28.79■■■□□ 2.2
PAM16-213ENST00000575942 NACADO15069 1562 aa28.61■■■□□ 2.17
PAM16-213ENST00000575942 DCAF8L2P0C7V8 631 aa28.43■■■□□ 2.14
PAM16-213ENST00000575942 MYO15BQ96JP2 1530 aa28.24■■■□□ 2.11
PAM16-213ENST00000575942 DNAJC5BQ9UF47 199 aa28.16■■■□□ 2.1
PAM16-213ENST00000575942 UNC13AQ9UPW8 1703 aa28.15■■■□□ 2.1
PAM16-213ENST00000575942 PABPN1Q86U42 306 aaKnown RBP eCLIP28.06■■■□□ 2.08
PAM16-213ENST00000575942 ZCCHC6Q5VYS8 1495 aaKnown RBP27.99■■■□□ 2.07
PAM16-213ENST00000575942 DCAF1Q9Y4B6 1507 aa27.91■■■□□ 2.06
PAM16-213ENST00000575942 BICRAQ9NZM4 1560 aa27.9■■■□□ 2.06
PAM16-213ENST00000575942 SHROOM4Q9ULL8 1493 aa27.59■■■□□ 2.01
PAM16-213ENST00000575942 SCRIBQ14160 1630 aa27.57■■■□□ 2
PAM16-213ENST00000575942 CC2D2AQ9P2K1 1620 aa27.27■■□□□ 1.96
PAM16-213ENST00000575942 EIF4G1Q04637 1599 aaKnown RBP27.24■■□□□ 1.95
PAM16-213ENST00000575942 CECR2Q9BXF3 1484 aa27.18■■□□□ 1.94
PAM16-213ENST00000575942 AEBP2Q6ZN18 517 aaPredicted RBP26.87■■□□□ 1.89
PAM16-213ENST00000575942 NCAPD3P42695 1498 aa26.38■■□□□ 1.81
PAM16-213ENST00000575942 SMARCA4P51532 1647 aa26.32■■□□□ 1.8
PAM16-213ENST00000575942 ATAD2BQ9ULI0 1458 aa26.31■■□□□ 1.8
PAM16-213ENST00000575942 SMARCA2P51531 1590 aa26.28■■□□□ 1.8
PAM16-213ENST00000575942 HMGXB3Q12766 1538 aa26.23■■□□□ 1.79
PAM16-213ENST00000575942 BAZ1AQ9NRL2 1556 aaPredicted RBP26.22■■□□□ 1.79
PAM16-213ENST00000575942 BAZ1BQ9UIG0 1483 aaKnown RBP26.08■■□□□ 1.77
PAM16-213ENST00000575942 PEG3Q9GZU2 1588 aa26.07■■□□□ 1.76
PAM16-213ENST00000575942 ERCC6Q03468 1493 aa26.07■■□□□ 1.76
PAM16-213ENST00000575942 CUX2O14529 1486 aa26■■□□□ 1.75
PAM16-213ENST00000575942 MROH2BQ7Z745 1585 aa25.99■■□□□ 1.75
PAM16-213ENST00000575942 NESP48681 1621 aa25.92■■□□□ 1.74
PAM16-213ENST00000575942 DNAJC5Q9H3Z4 198 aa25.85■■□□□ 1.73
PAM16-213ENST00000575942 LAMC3Q9Y6N6 1575 aa25.82■■□□□ 1.72
PAM16-213ENST00000575942 CHIC1Q5VXU3 224 aa25.78■■□□□ 1.72
PAM16-213ENST00000575942 WIZO95785 1651 aa25.7■■□□□ 1.7
PAM16-213ENST00000575942 THOC2Q8NI27 1593 aaKnown RBP25.69■■□□□ 1.7
PAM16-213ENST00000575942 PDS5BQ9NTI5 1447 aa25.65■■□□□ 1.7
PAM16-213ENST00000575942 KIF21AQ7Z4S6 1674 aa25.64■■□□□ 1.7
PAM16-213ENST00000575942 CADPSQ9ULU8 1353 aa25.58■■□□□ 1.69
PAM16-213ENST00000575942 RSF1Q96T23 1441 aaPredicted RBP25.47■■□□□ 1.67
PAM16-213ENST00000575942 MRC2Q9UBG0 1479 aa25.41■■□□□ 1.66
PAM16-213ENST00000575942 TOP2AP11388 1531 aaKnown RBP25.39■■□□□ 1.66
PAM16-213ENST00000575942 WDR62O43379 1518 aa25.34■■□□□ 1.65
PAM16-213ENST00000575942 CEP164Q9UPV0 1460 aa25.34■■□□□ 1.65
PAM16-213ENST00000575942 CFTRP13569 1480 aa25.31■■□□□ 1.64
PAM16-213ENST00000575942 FANCD2Q9BXW9 1451 aa25.3■■□□□ 1.64
PAM16-213ENST00000575942 PRDM2Q13029 1718 aa25.15■■□□□ 1.62
PAM16-213ENST00000575942 CCDC88BA6NC98 1476 aa25.08■■□□□ 1.6
PAM16-213ENST00000575942 URB2Q14146 1524 aaKnown RBP25.07■■□□□ 1.6
PAM16-213ENST00000575942 TOPBP1Q92547 1522 aa24.83■■□□□ 1.57
PAM16-213ENST00000575942 ABCC8Q09428 1581 aa24.82■■□□□ 1.56
PAM16-213ENST00000575942 IFT140Q96RY7 1462 aa24.82■■□□□ 1.56
PAM16-213ENST00000575942 OSCARQ8IYS5 282 aa24.8■■□□□ 1.56
PAM16-213ENST00000575942 DNMBPQ6XZF7 1577 aa24.76■■□□□ 1.55
PAM16-213ENST00000575942 TRIM41Q8WV44 630 aa24.76■■□□□ 1.55
PAM16-213ENST00000575942 ZNF608Q9ULD9 1512 aaPredicted RBP24.74■■□□□ 1.55
PAM16-213ENST00000575942 EIF4G3O43432 1585 aaKnown RBP24.65■■□□□ 1.54
PAM16-213ENST00000575942 TARBP1Q13395 1621 aaKnown RBP24.61■■□□□ 1.53
PAM16-213ENST00000575942 POLA1P09884 1462 aaPredicted RBP24.58■■□□□ 1.52
PAM16-213ENST00000575942 AQRO60306 1485 aaKnown RBP eCLIP24.52■■□□□ 1.521e-6■■■■□ 26.2
PAM16-213ENST00000575942 RIMBP3CA6NJZ7 1639 aa24.49■■□□□ 1.51
PAM16-213ENST00000575942 RIMBP3BA6NNM3 1639 aa24.49■■□□□ 1.51
PAM16-213ENST00000575942 RIMBP3Q9UFD9 1639 aa24.49■■□□□ 1.51
PAM16-213ENST00000575942 CHD1O14646 1710 aa24.47■■□□□ 1.51
PAM16-213ENST00000575942 RAD54L2Q9Y4B4 1467 aa24.46■■□□□ 1.51
PAM16-213ENST00000575942 SOGA1O94964 1423 aa24.46■■□□□ 1.51
PAM16-213ENST00000575942 FGD5Q6ZNL6 1462 aa24.44■■□□□ 1.5
PAM16-213ENST00000575942 ARHGEF11O15085 1522 aa24.41■■□□□ 1.5
PAM16-213ENST00000575942 CUX1P39880 1505 aa24.41■■□□□ 1.5
PAM16-213ENST00000575942 WDR97A6NE52 1622 aa24.41■■□□□ 1.5
PAM16-213ENST00000575942 SUPT5HO00267 1087 aaKnown RBP24.4■■□□□ 1.5
PAM16-213ENST00000575942 TDRD9Q8NDG6 1382 aaKnown RBP24.38■■□□□ 1.49
PAM16-213ENST00000575942 FBLN2P98095 1184 aa24.37■■□□□ 1.49
PAM16-213ENST00000575942 SNAPC4Q5SXM2 1469 aa24.3■■□□□ 1.48
PAM16-213ENST00000575942 MAGI1Q96QZ7 1491 aaPredicted RBP24.26■■□□□ 1.47
PAM16-213ENST00000575942 GRIN2BQ13224 1484 aa24.26■■□□□ 1.47
PAM16-213ENST00000575942 CHMP7Q8WUX9 453 aaPredicted RBP24.21■■□□□ 1.47
PAM16-213ENST00000575942 PBRM1Q86U86 1689 aa24.21■■□□□ 1.47
PAM16-213ENST00000575942 CYB5RLQ6IPT4 315 aa24.2■■□□□ 1.46
PAM16-213ENST00000575942 SYNJ1O43426 1573 aa24.19■■□□□ 1.46
PAM16-213ENST00000575942 GAPVD1Q14C86 1478 aa24.18■■□□□ 1.46
PAM16-213ENST00000575942 ABCA10Q8WWZ4 1543 aa24.17■■□□□ 1.46
PAM16-213ENST00000575942 SYNJ2O15056 1496 aa24.17■■□□□ 1.46
PAM16-213ENST00000575942 CLASP1Q7Z460 1538 aa24.16■■□□□ 1.46
PAM16-213ENST00000575942 ARAP1Q96P48 1450 aa24.16■■□□□ 1.46
PAM16-213ENST00000575942 ABCA5Q8WWZ7 1642 aa24.13■■□□□ 1.45
PAM16-213ENST00000575942 BIVM-ERCC5R4GMW8 1640 aa24.09■■□□□ 1.45
PAM16-213ENST00000575942 WRNQ14191 1432 aaPredicted RBP eCLIP24.09■■□□□ 1.45
PAM16-213ENST00000575942 TOP2BQ02880 1626 aa24.07■■□□□ 1.44
PAM16-213ENST00000575942 ADAMTS12P58397 1594 aa23.95■■□□□ 1.43
PAM16-213ENST00000575942 GRIN2AQ12879 1464 aa23.94■■□□□ 1.42
PAM16-213ENST00000575942 TRHP20396 242 aaPredicted RBP23.93■■□□□ 1.42
PAM16-213ENST00000575942 ERICH3Q5RHP9 1530 aa23.89■■□□□ 1.41
PAM16-213ENST00000575942 FHAD1B1AJZ9 1412 aa23.88■■□□□ 1.41
PAM16-213ENST00000575942 NUP160Q12769 1436 aa23.85■■□□□ 1.41
PAM16-213ENST00000575942 CEP170Q5SW79 1584 aa23.85■■□□□ 1.41
PAM16-213ENST00000575942 ERCC6L2Q5T890 1561 aa23.76■■□□□ 1.39
PAM16-213ENST00000575942 SHROOM2Q13796 1616 aa23.76■■□□□ 1.39
PAM16-213ENST00000575942 PRG4Q92954 1404 aaPredicted RBP23.61■■□□□ 1.37
PAM16-213ENST00000575942 RUSC2Q8N2Y8 1516 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms