RNA–Protein interactions for RNA: ENST00000468499.5

COPS6-206, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 745 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-206ENST00000468499 NISCHQ9Y2I1 1504 aa45.61■■■■■ 4.89
COPS6-206ENST00000468499 ABCC9O60706 1549 aa41.58■■■■■ 4.25
COPS6-206ENST00000468499 CCDC180Q9P1Z9 1646 aa41.15■■■■■ 4.18
COPS6-206ENST00000468499 DNAJC5BQ9UF47 199 aa39.52■■■■□ 3.92
COPS6-206ENST00000468499 RB1CC1Q8TDY2 1594 aa39.31■■■■□ 3.88
COPS6-206ENST00000468499 NACADO15069 1562 aa38.94■■■■□ 3.82
COPS6-206ENST00000468499 UNC13AQ9UPW8 1703 aa38.66■■■■□ 3.78
COPS6-206ENST00000468499 PABPN1Q86U42 306 aaKnown RBP eCLIP38.58■■■■□ 3.77
COPS6-206ENST00000468499 DCAF8L2P0C7V8 631 aa38.44■■■■□ 3.74
COPS6-206ENST00000468499 BICRAQ9NZM4 1560 aa38.38■■■■□ 3.73
COPS6-206ENST00000468499 MYO15BQ96JP2 1530 aa38.28■■■■□ 3.72
COPS6-206ENST00000468499 ZCCHC6Q5VYS8 1495 aaKnown RBP37.73■■■■□ 3.63
COPS6-206ENST00000468499 DCAF1Q9Y4B6 1507 aa37.62■■■■□ 3.61
COPS6-206ENST00000468499 SHROOM4Q9ULL8 1493 aa37.62■■■■□ 3.61
COPS6-206ENST00000468499 CC2D2AQ9P2K1 1620 aa37.58■■■■□ 3.61
COPS6-206ENST00000468499 SCRIBQ14160 1630 aa37.47■■■■□ 3.59
COPS6-206ENST00000468499 CECR2Q9BXF3 1484 aa37.47■■■■□ 3.59
COPS6-206ENST00000468499 EIF4G1Q04637 1599 aaKnown RBP37.38■■■■□ 3.57
COPS6-206ENST00000468499 DNAJC5Q9H3Z4 198 aa36.47■■■■□ 3.43
COPS6-206ENST00000468499 NCAPD3P42695 1498 aa35.98■■■■□ 3.35
COPS6-206ENST00000468499 CUX2O14529 1486 aa35.97■■■■□ 3.35
COPS6-206ENST00000468499 ATAD2BQ9ULI0 1458 aa35.82■■■■□ 3.32
COPS6-206ENST00000468499 ERCC6Q03468 1493 aa35.8■■■■□ 3.32
COPS6-206ENST00000468499 SMARCA4P51532 1647 aa35.71■■■■□ 3.31
COPS6-206ENST00000468499 HMGXB3Q12766 1538 aa35.69■■■■□ 3.3
COPS6-206ENST00000468499 NESP48681 1621 aa35.66■■■■□ 3.3
COPS6-206ENST00000468499 SMARCA2P51531 1590 aa35.63■■■■□ 3.29
COPS6-206ENST00000468499 THOC2Q8NI27 1593 aaKnown RBP35.43■■■■□ 3.26
COPS6-206ENST00000468499 BAZ1BQ9UIG0 1483 aaKnown RBP35.39■■■■□ 3.26
COPS6-206ENST00000468499 PEG3Q9GZU2 1588 aa35.38■■■■□ 3.25
COPS6-206ENST00000468499 BAZ1AQ9NRL2 1556 aaPredicted RBP35.38■■■■□ 3.25
COPS6-206ENST00000468499 LAMC3Q9Y6N6 1575 aa35.23■■■■□ 3.23
COPS6-206ENST00000468499 KIF21AQ7Z4S6 1674 aa35.21■■■■□ 3.23
COPS6-206ENST00000468499 MROH2BQ7Z745 1585 aa35.19■■■■□ 3.22
COPS6-206ENST00000468499 PDS5BQ9NTI5 1447 aa34.94■■■■□ 3.18
COPS6-206ENST00000468499 CADPSQ9ULU8 1353 aa34.81■■■■□ 3.16
COPS6-206ENST00000468499 WDR62O43379 1518 aa34.77■■■■□ 3.16
COPS6-206ENST00000468499 MRC2Q9UBG0 1479 aa34.77■■■■□ 3.16
COPS6-206ENST00000468499 WIZO95785 1651 aa34.76■■■■□ 3.15
COPS6-206ENST00000468499 TRIM41Q8WV44 630 aa34.61■■■■□ 3.13
COPS6-206ENST00000468499 CEP164Q9UPV0 1460 aa34.5■■■■□ 3.11
COPS6-206ENST00000468499 FANCD2Q9BXW9 1451 aa34.45■■■■□ 3.1
COPS6-206ENST00000468499 CFTRP13569 1480 aa34.38■■■■□ 3.09
COPS6-206ENST00000468499 URB2Q14146 1524 aaKnown RBP34.29■■■■□ 3.08
COPS6-206ENST00000468499 RSF1Q96T23 1441 aaPredicted RBP34.23■■■■□ 3.07
COPS6-206ENST00000468499 TOP2AP11388 1531 aaKnown RBP34.22■■■■□ 3.07
COPS6-206ENST00000468499 OSCARQ8IYS5 282 aa34.13■■■■□ 3.05
COPS6-206ENST00000468499 PRDM2Q13029 1718 aa34.07■■■■□ 3.04
COPS6-206ENST00000468499 RIMBP3CA6NJZ7 1639 aa33.97■■■■□ 3.03
COPS6-206ENST00000468499 RIMBP3BA6NNM3 1639 aa33.97■■■■□ 3.03
COPS6-206ENST00000468499 RIMBP3Q9UFD9 1639 aa33.97■■■■□ 3.03
COPS6-206ENST00000468499 ZNF608Q9ULD9 1512 aaPredicted RBP33.95■■■■□ 3.03
COPS6-206ENST00000468499 CCDC88BA6NC98 1476 aa33.83■■■■□ 3.01
COPS6-206ENST00000468499 IFT140Q96RY7 1462 aa33.82■■■■□ 3.01
COPS6-206ENST00000468499 TOPBP1Q92547 1522 aa33.79■■■■□ 3
COPS6-206ENST00000468499 ARHGEF11O15085 1522 aa33.77■■■■□ 3
COPS6-206ENST00000468499 EIF4G3O43432 1585 aaKnown RBP33.73■■■□□ 2.99
COPS6-206ENST00000468499 DNMBPQ6XZF7 1577 aa33.61■■■□□ 2.97
COPS6-206ENST00000468499 TARBP1Q13395 1621 aaKnown RBP33.6■■■□□ 2.97
COPS6-206ENST00000468499 CHD1O14646 1710 aa33.59■■■□□ 2.97
COPS6-206ENST00000468499 ABCC8Q09428 1581 aa33.53■■■□□ 2.96
COPS6-206ENST00000468499 AQRO60306 1485 aaKnown RBP eCLIP33.51■■■□□ 2.963e-14■■■■■ 70.9
COPS6-206ENST00000468499 ARAP1Q96P48 1450 aa33.44■■■□□ 2.94
COPS6-206ENST00000468499 POLA1P09884 1462 aaPredicted RBP33.42■■■□□ 2.94
COPS6-206ENST00000468499 CYB5RLQ6IPT4 315 aa33.4■■■□□ 2.94
COPS6-206ENST00000468499 RAD54L2Q9Y4B4 1467 aa33.31■■■□□ 2.92
COPS6-206ENST00000468499 CLASP1Q7Z460 1538 aa33.2■■■□□ 2.91
COPS6-206ENST00000468499 FBLN2P98095 1184 aa33.2■■■□□ 2.91
COPS6-206ENST00000468499 TDRD9Q8NDG6 1382 aaKnown RBP33.2■■■□□ 2.9
COPS6-206ENST00000468499 SNAPC4Q5SXM2 1469 aa33.16■■■□□ 2.9
COPS6-206ENST00000468499 SOGA1O94964 1423 aa33.15■■■□□ 2.9
COPS6-206ENST00000468499 FGD5Q6ZNL6 1462 aa33.13■■■□□ 2.89
COPS6-206ENST00000468499 WDR97A6NE52 1622 aa33.1■■■□□ 2.89
COPS6-206ENST00000468499 TRHP20396 242 aaPredicted RBP33.09■■■□□ 2.89
COPS6-206ENST00000468499 CUX1P39880 1505 aa33.07■■■□□ 2.89
COPS6-206ENST00000468499 SYNJ1O43426 1573 aa33■■■□□ 2.87
COPS6-206ENST00000468499 MAGI1Q96QZ7 1491 aaPredicted RBP32.99■■■□□ 2.87
COPS6-206ENST00000468499 GRIN2BQ13224 1484 aa32.93■■■□□ 2.86
COPS6-206ENST00000468499 SYNJ2O15056 1496 aa32.91■■■□□ 2.86
COPS6-206ENST00000468499 PBRM1Q86U86 1689 aa32.91■■■□□ 2.86
COPS6-206ENST00000468499 CHMP7Q8WUX9 453 aaPredicted RBP32.88■■■□□ 2.85
COPS6-206ENST00000468499 ABCA5Q8WWZ7 1642 aa32.8■■■□□ 2.84
COPS6-206ENST00000468499 GAPVD1Q14C86 1478 aa32.77■■■□□ 2.84
COPS6-206ENST00000468499 ABCA10Q8WWZ4 1543 aa32.72■■■□□ 2.83
COPS6-206ENST00000468499 ERCC6L2Q5T890 1561 aa32.7■■■□□ 2.83
COPS6-206ENST00000468499 CEP170Q5SW79 1584 aa32.57■■■□□ 2.8
COPS6-206ENST00000468499 GRIN2AQ12879 1464 aa32.56■■■□□ 2.8
COPS6-206ENST00000468499 ADAMTS12P58397 1594 aa32.56■■■□□ 2.8
COPS6-206ENST00000468499 NUP160Q12769 1436 aa32.51■■■□□ 2.79
COPS6-206ENST00000468499 SHROOM2Q13796 1616 aa32.48■■■□□ 2.79
COPS6-206ENST00000468499 BIVM-ERCC5R4GMW8 1640 aa32.43■■■□□ 2.78
COPS6-206ENST00000468499 AEBP2Q6ZN18 517 aaPredicted RBP32.39■■■□□ 2.78
COPS6-206ENST00000468499 TOP2BQ02880 1626 aa32.38■■■□□ 2.77
COPS6-206ENST00000468499 WRNQ14191 1432 aaPredicted RBP eCLIP32.38■■■□□ 2.77
COPS6-206ENST00000468499 KIF13AQ9H1H9 1805 aa32.34■■■□□ 2.77
COPS6-206ENST00000468499 FHAD1B1AJZ9 1412 aa32.32■■■□□ 2.76
COPS6-206ENST00000468499 ERICH3Q5RHP9 1530 aa32.26■■■□□ 2.76
COPS6-206ENST00000468499 SUPT5HO00267 1087 aaKnown RBP32.19■■■□□ 2.74
COPS6-206ENST00000468499 PRG4Q92954 1404 aaPredicted RBP32.16■■■□□ 2.74
COPS6-206ENST00000468499 RUSC2Q8N2Y8 1516 aa32.13■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms