RNA–Protein interactions for RNA: ENST00000378896.7

MCM8-204, Transcript of minichromosome maintenance 8 homologous recombination repair factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MCM8, Length 3,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM8-204ENST00000378896 NISCHQ9Y2I1 1504 aa17.38■□□□□ 0.37
MCM8-204ENST00000378896 HRCP23327 699 aa15.52■□□□□ 0.07
MCM8-204ENST00000378896 PPARGC1BQ86YN6 1023 aaKnown RBP15.34■□□□□ 0.05
MCM8-204ENST00000378896 SHROOM4Q9ULL8 1493 aa15.28■□□□□ 0.04
MCM8-204ENST00000378896 SUPT5HO00267 1087 aaKnown RBP15.21■□□□□ 0.02
MCM8-204ENST00000378896 PELP1Q8IZL8 1130 aaKnown RBP15.19■□□□□ 0.02
MCM8-204ENST00000378896 PCGF6Q9BYE7 350 aa15.14■□□□□ 0.01
MCM8-204ENST00000378896 MYO15BQ96JP2 1530 aa14.93□□□□□ -0.02
MCM8-204ENST00000378896 SCAF1Q9H7N4 1312 aaKnown RBP14.9□□□□□ -0.02
MCM8-204ENST00000378896 CHIC1Q5VXU3 224 aa14.77□□□□□ -0.04
MCM8-204ENST00000378896 DCAF8L2P0C7V8 631 aa14.76□□□□□ -0.05
MCM8-204ENST00000378896 ZCCHC6Q5VYS8 1495 aaKnown RBP14.71□□□□□ -0.05
MCM8-204ENST00000378896 MYT1Q01538 1121 aa14.6□□□□□ -0.07
MCM8-204ENST00000378896 CCDC180Q9P1Z9 1646 aa14.54□□□□□ -0.08
MCM8-204ENST00000378896 DCAF1Q9Y4B6 1507 aa14.51□□□□□ -0.09
MCM8-204ENST00000378896 LOC105371045A0A1W2PR82 267 aa14.49□□□□□ -0.09
MCM8-204ENST00000378896 TRIM26Q12899 539 aaPredicted RBP14.48□□□□□ -0.09
MCM8-204ENST00000378896 NEUROD1Q13562 356 aa14.4□□□□□ -0.1
MCM8-204ENST00000378896 ACIN1Q9UKV3 1341 aaKnown RBP14.38□□□□□ -0.11
MCM8-204ENST00000378896 ZEB1P37275 1124 aaPredicted RBP14.35□□□□□ -0.11
MCM8-204ENST00000378896 GTF3C3Q9Y5Q9 886 aa14.32□□□□□ -0.12
MCM8-204ENST00000378896 TRIM41Q8WV44 630 aa14.13□□□□□ -0.15
MCM8-204ENST00000378896 FAM9AQ8IZU1 332 aaPredicted RBP14.08□□□□□ -0.16
MCM8-204ENST00000378896 CENPBP07199 599 aaPredicted RBP14.06□□□□□ -0.16
MCM8-204ENST00000378896 DIEXFQ68CQ4 756 aaKnown RBP14□□□□□ -0.17
MCM8-204ENST00000378896 EHMT2Q96KQ7 1210 aa14□□□□□ -0.17
MCM8-204ENST00000378896 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.95□□□□□ -0.18
MCM8-204ENST00000378896 ABCC9O60706 1549 aa13.92□□□□□ -0.18
MCM8-204ENST00000378896 RSF1Q96T23 1441 aaPredicted RBP13.9□□□□□ -0.18
MCM8-204ENST00000378896 YTHDC1Q96MU7 727 aaKnown RBP13.88□□□□□ -0.19
MCM8-204ENST00000378896 BCL11AQ9H165 835 aa13.88□□□□□ -0.19
MCM8-204ENST00000378896 CCER1Q8TC90 406 aaPredicted RBP13.85□□□□□ -0.19
MCM8-204ENST00000378896 SCRIBQ14160 1630 aa13.82□□□□□ -0.2
MCM8-204ENST00000378896 RB1CC1Q8TDY2 1594 aa13.77□□□□□ -0.2
MCM8-204ENST00000378896 TTBK1Q5TCY1 1321 aaPredicted RBP13.74□□□□□ -0.21
MCM8-204ENST00000378896 ANP32EQ9BTT0 268 aa13.68□□□□□ -0.22
MCM8-204ENST00000378896 MIER1Q8N108 512 aa13.67□□□□□ -0.22
MCM8-204ENST00000378896 ZNF316A6NFI3 1004 aaPredicted RBP13.63□□□□□ -0.23
MCM8-204ENST00000378896 CSRNP3Q8WYN3 585 aa13.62□□□□□ -0.23
MCM8-204ENST00000378896 TSHZ2Q9NRE2 1034 aa13.58□□□□□ -0.24
MCM8-204ENST00000378896 CECR2Q9BXF3 1484 aa13.56□□□□□ -0.24
MCM8-204ENST00000378896 SUPT16HQ9Y5B9 1047 aaKnown RBP13.55□□□□□ -0.24
MCM8-204ENST00000378896 MROH2BQ7Z745 1585 aa13.52□□□□□ -0.24
MCM8-204ENST00000378896 PRKCSHP14314 528 aaPredicted RBP13.51□□□□□ -0.25
MCM8-204ENST00000378896 UBTFP17480 764 aaKnown RBP13.48□□□□□ -0.25
MCM8-204ENST00000378896 NACADO15069 1562 aa13.47□□□□□ -0.25
MCM8-204ENST00000378896 WIZO95785 1651 aa13.44□□□□□ -0.26
MCM8-204ENST00000378896 CEP162Q5TB80 1403 aa13.41□□□□□ -0.26
MCM8-204ENST00000378896 WRNQ14191 1432 aaPredicted RBP eCLIP13.4□□□□□ -0.26
MCM8-204ENST00000378896 BAZ1AQ9NRL2 1556 aaPredicted RBP13.37□□□□□ -0.27
MCM8-204ENST00000378896 TNIKQ9UKE5 1360 aa13.37□□□□□ -0.27
MCM8-204ENST00000378896 APLP2Q06481 763 aa13.35□□□□□ -0.27
MCM8-204ENST00000378896 HNRNPUL2Q1KMD3 747 aaKnown RBP13.33□□□□□ -0.28
MCM8-204ENST00000378896 CCDC88BA6NC98 1476 aa13.32□□□□□ -0.28
MCM8-204ENST00000378896 EEA1Q15075 1411 aa13.32□□□□□ -0.28
MCM8-204ENST00000378896 ABCC8Q09428 1581 aa13.31□□□□□ -0.28
MCM8-204ENST00000378896 CLSPNQ9HAW4 1339 aa13.29□□□□□ -0.28
MCM8-204ENST00000378896 SOGA1O94964 1423 aa13.29□□□□□ -0.28
MCM8-204ENST00000378896 BCANQ96GW7 911 aa13.29□□□□□ -0.28
MCM8-204ENST00000378896 TOP2AP11388 1531 aaKnown RBP13.25□□□□□ -0.29
MCM8-204ENST00000378896 GOLGA3Q08378 1498 aa13.25□□□□□ -0.29
MCM8-204ENST00000378896 EIF4G1Q04637 1599 aaKnown RBP13.24□□□□□ -0.29
MCM8-204ENST00000378896 RBM19Q9Y4C8 960 aaKnown RBP13.22□□□□□ -0.29
MCM8-204ENST00000378896 MSH5O43196 834 aa13.19□□□□□ -0.3
MCM8-204ENST00000378896 RANGAP1P46060 587 aaPredicted RBP13.18□□□□□ -0.3
MCM8-204ENST00000378896 SMARCA2P51531 1590 aa13.16□□□□□ -0.3
MCM8-204ENST00000378896 KCNH8Q96L42 1107 aa13.16□□□□□ -0.3
MCM8-204ENST00000378896 RUSC2Q8N2Y8 1516 aa13.16□□□□□ -0.3
MCM8-204ENST00000378896 CLIP1P30622 1438 aa13.15□□□□□ -0.3
MCM8-204ENST00000378896 SMARCA4P51532 1647 aa13.15□□□□□ -0.3
MCM8-204ENST00000378896 FKBP8Q14318 412 aa13.14□□□□□ -0.31
MCM8-204ENST00000378896 CEP164Q9UPV0 1460 aa13.13□□□□□ -0.31
MCM8-204ENST00000378896 AEBP2Q6ZN18 517 aaPredicted RBP13.1□□□□□ -0.31
MCM8-204ENST00000378896 ITGAEP38570 1179 aa13.09□□□□□ -0.31
MCM8-204ENST00000378896 VPS8Q8N3P4 1428 aa13.08□□□□□ -0.32
MCM8-204ENST00000378896 ANO8Q9HCE9 1232 aaPredicted RBP13.06□□□□□ -0.32
MCM8-204ENST00000378896 PABPN1Q86U42 306 aaKnown RBP eCLIP13.02□□□□□ -0.33
MCM8-204ENST00000378896 ERICH6Q7L0X2 663 aa13.01□□□□□ -0.33
MCM8-204ENST00000378896 KIF21BO75037 1637 aa12.99□□□□□ -0.33
MCM8-204ENST00000378896 BAZ1BQ9UIG0 1483 aaKnown RBP12.98□□□□□ -0.33
MCM8-204ENST00000378896 DEKP35659 375 aaKnown RBP12.96□□□□□ -0.33
MCM8-204ENST00000378896 RAPGEF2Q9Y4G8 1499 aa12.94□□□□□ -0.34
MCM8-204ENST00000378896 DHX57Q6P158 1386 aaKnown RBP12.92□□□□□ -0.34
MCM8-204ENST00000378896 SYNJ1O43426 1573 aa12.92□□□□□ -0.34
MCM8-204ENST00000378896 FANCIQ9NVI1 1328 aa12.9□□□□□ -0.34
MCM8-204ENST00000378896 SALL2Q9Y467 1007 aaPredicted RBP12.9□□□□□ -0.34
MCM8-204ENST00000378896 NEFLP07196 543 aa12.9□□□□□ -0.35
MCM8-204ENST00000378896 TRIM52Q96A61 297 aa12.88□□□□□ -0.35
MCM8-204ENST00000378896 CCDC136Q96JN2 1154 aa12.85□□□□□ -0.35
MCM8-204ENST00000378896 KANK4Q5T7N3 995 aaPredicted RBP12.84□□□□□ -0.35
MCM8-204ENST00000378896 UNC13AQ9UPW8 1703 aa12.81□□□□□ -0.36
MCM8-204ENST00000378896 IRX6P78412 446 aaPredicted RBP12.81□□□□□ -0.36
MCM8-204ENST00000378896 DDX10Q13206 875 aaKnown RBP12.81□□□□□ -0.36
MCM8-204ENST00000378896 CCNB3Q8WWL7 1395 aa12.8□□□□□ -0.36
MCM8-204ENST00000378896 ATAD2BQ9ULI0 1458 aa12.8□□□□□ -0.36
MCM8-204ENST00000378896 PEG3Q9GZU2 1588 aa12.79□□□□□ -0.36
MCM8-204ENST00000378896 NBR1Q14596 966 aa12.79□□□□□ -0.36
MCM8-204ENST00000378896 CDK11AQ9UQ88 783 aaPredicted RBP12.77□□□□□ -0.36
MCM8-204ENST00000378896 MYT1LQ9UL68 1186 aa12.76□□□□□ -0.37
MCM8-204ENST00000378896 RRBP1Q9P2E9 1410 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms