RNA–Protein interactions for RNA: ENST00000378883.5

MCM8-202, Transcript of minichromosome maintenance 8 homologous recombination repair factor, humanhuman

TSL 1 (best) BASIC

Gene MCM8, Length 3,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM8-202ENST00000378883 NISCHQ9Y2I1 1504 aa15.66■□□□□ 0.1
MCM8-202ENST00000378883 HRCP23327 699 aa15.08■□□□□ 0
MCM8-202ENST00000378883 PELP1Q8IZL8 1130 aaKnown RBP15.08■□□□□ 0
MCM8-202ENST00000378883 PPARGC1BQ86YN6 1023 aaKnown RBP14.72□□□□□ -0.05
MCM8-202ENST00000378883 MYT1Q01538 1121 aa14.6□□□□□ -0.07
MCM8-202ENST00000378883 PCGF6Q9BYE7 350 aa14.59□□□□□ -0.07
MCM8-202ENST00000378883 SCAF1Q9H7N4 1312 aaKnown RBP14.44□□□□□ -0.1
MCM8-202ENST00000378883 MYO15BQ96JP2 1530 aa14.3□□□□□ -0.12
MCM8-202ENST00000378883 SUPT5HO00267 1087 aaKnown RBP14.24□□□□□ -0.13
MCM8-202ENST00000378883 CHIC1Q5VXU3 224 aa14.15□□□□□ -0.14
MCM8-202ENST00000378883 SHROOM4Q9ULL8 1493 aa14.14□□□□□ -0.15
MCM8-202ENST00000378883 DCAF1Q9Y4B6 1507 aa14.12□□□□□ -0.15
MCM8-202ENST00000378883 DCAF8L2P0C7V8 631 aa14.08□□□□□ -0.16
MCM8-202ENST00000378883 ZEB1P37275 1124 aaPredicted RBP14.07□□□□□ -0.16
MCM8-202ENST00000378883 TRIM26Q12899 539 aaPredicted RBP14.06□□□□□ -0.16
MCM8-202ENST00000378883 ACIN1Q9UKV3 1341 aaKnown RBP14□□□□□ -0.17
MCM8-202ENST00000378883 CCDC180Q9P1Z9 1646 aa13.99□□□□□ -0.17
MCM8-202ENST00000378883 NEUROD1Q13562 356 aa13.92□□□□□ -0.18
MCM8-202ENST00000378883 GTF3C3Q9Y5Q9 886 aa13.89□□□□□ -0.19
MCM8-202ENST00000378883 LOC105371045A0A1W2PR82 267 aa13.85□□□□□ -0.19
MCM8-202ENST00000378883 TTBK1Q5TCY1 1321 aaPredicted RBP13.8□□□□□ -0.2
MCM8-202ENST00000378883 CENPBP07199 599 aaPredicted RBP13.78□□□□□ -0.2
MCM8-202ENST00000378883 BCL11AQ9H165 835 aa13.58□□□□□ -0.24
MCM8-202ENST00000378883 DIEXFQ68CQ4 756 aaKnown RBP13.57□□□□□ -0.24
MCM8-202ENST00000378883 FAM9AQ8IZU1 332 aaPredicted RBP13.46□□□□□ -0.25
MCM8-202ENST00000378883 EHMT2Q96KQ7 1210 aa13.44□□□□□ -0.26
MCM8-202ENST00000378883 CCER1Q8TC90 406 aaPredicted RBP13.4□□□□□ -0.26
MCM8-202ENST00000378883 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.4□□□□□ -0.26
MCM8-202ENST00000378883 ANP32EQ9BTT0 268 aa13.38□□□□□ -0.27
MCM8-202ENST00000378883 ZCCHC6Q5VYS8 1495 aaKnown RBP13.38□□□□□ -0.27
MCM8-202ENST00000378883 YTHDC1Q96MU7 727 aaKnown RBP13.37□□□□□ -0.27
MCM8-202ENST00000378883 TRIM41Q8WV44 630 aa13.33□□□□□ -0.27
MCM8-202ENST00000378883 PRKCSHP14314 528 aaPredicted RBP13.26□□□□□ -0.29
MCM8-202ENST00000378883 ZNF316A6NFI3 1004 aaPredicted RBP13.24□□□□□ -0.29
MCM8-202ENST00000378883 CSRNP3Q8WYN3 585 aa13.24□□□□□ -0.29
MCM8-202ENST00000378883 MIER1Q8N108 512 aa13.19□□□□□ -0.3
MCM8-202ENST00000378883 TSHZ2Q9NRE2 1034 aa13.18□□□□□ -0.3
MCM8-202ENST00000378883 SUPT16HQ9Y5B9 1047 aaKnown RBP13.15□□□□□ -0.3
MCM8-202ENST00000378883 CLSPNQ9HAW4 1339 aa13.14□□□□□ -0.31
MCM8-202ENST00000378883 ERICH6Q7L0X2 663 aa13.01□□□□□ -0.33
MCM8-202ENST00000378883 RBM19Q9Y4C8 960 aaKnown RBP12.84□□□□□ -0.35
MCM8-202ENST00000378883 APLP2Q06481 763 aa12.84□□□□□ -0.35
MCM8-202ENST00000378883 BCANQ96GW7 911 aa12.8□□□□□ -0.36
MCM8-202ENST00000378883 WRNQ14191 1432 aaPredicted RBP eCLIP12.79□□□□□ -0.36
MCM8-202ENST00000378883 ABCC9O60706 1549 aa12.77□□□□□ -0.37
MCM8-202ENST00000378883 MSH5O43196 834 aa12.75□□□□□ -0.37
MCM8-202ENST00000378883 RSF1Q96T23 1441 aaPredicted RBP12.75□□□□□ -0.37
MCM8-202ENST00000378883 RB1CC1Q8TDY2 1594 aa12.73□□□□□ -0.37
MCM8-202ENST00000378883 FKBP8Q14318 412 aa12.73□□□□□ -0.37
MCM8-202ENST00000378883 ANO8Q9HCE9 1232 aaPredicted RBP12.7□□□□□ -0.38
MCM8-202ENST00000378883 MYT1LQ9UL68 1186 aa12.68□□□□□ -0.38
MCM8-202ENST00000378883 HNRNPUL2Q1KMD3 747 aaKnown RBP12.66□□□□□ -0.38
MCM8-202ENST00000378883 CEP162Q5TB80 1403 aa12.64□□□□□ -0.39
MCM8-202ENST00000378883 DEKP35659 375 aaKnown RBP12.64□□□□□ -0.39
MCM8-202ENST00000378883 FANCIQ9NVI1 1328 aa12.63□□□□□ -0.39
MCM8-202ENST00000378883 NEFLP07196 543 aa12.61□□□□□ -0.39
MCM8-202ENST00000378883 ITGAEP38570 1179 aa12.61□□□□□ -0.39
MCM8-202ENST00000378883 KCNH8Q96L42 1107 aa12.59□□□□□ -0.39
MCM8-202ENST00000378883 RANGAP1P46060 587 aaPredicted RBP12.58□□□□□ -0.4
MCM8-202ENST00000378883 SALL2Q9Y467 1007 aaPredicted RBP12.54□□□□□ -0.4
MCM8-202ENST00000378883 TNIKQ9UKE5 1360 aa12.53□□□□□ -0.4
MCM8-202ENST00000378883 ERICH6BQ5W0A0 696 aa12.52□□□□□ -0.4
MCM8-202ENST00000378883 CDK11AQ9UQ88 783 aaPredicted RBP12.48□□□□□ -0.41
MCM8-202ENST00000378883 UBE2Q2Q8WVN8 375 aa12.46□□□□□ -0.42
MCM8-202ENST00000378883 CCDC136Q96JN2 1154 aa12.45□□□□□ -0.42
MCM8-202ENST00000378883 UBTFP17480 764 aaKnown RBP12.44□□□□□ -0.42
MCM8-202ENST00000378883 DHX57Q6P158 1386 aaKnown RBP12.44□□□□□ -0.42
MCM8-202ENST00000378883 TRIM52Q96A61 297 aa12.39□□□□□ -0.43
MCM8-202ENST00000378883 NBR1Q14596 966 aa12.39□□□□□ -0.43
MCM8-202ENST00000378883 CCDC88BA6NC98 1476 aa12.37□□□□□ -0.43
MCM8-202ENST00000378883 ABCC8Q09428 1581 aa12.36□□□□□ -0.43
MCM8-202ENST00000378883 SOGA1O94964 1423 aa12.35□□□□□ -0.43
MCM8-202ENST00000378883 NOP58Q9Y2X3 529 aaKnown RBP12.35□□□□□ -0.43
MCM8-202ENST00000378883 IL27Q8NEV9 243 aa12.34□□□□□ -0.43
MCM8-202ENST00000378883 DDX10Q13206 875 aaKnown RBP12.34□□□□□ -0.43
MCM8-202ENST00000378883 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.34□□□□□ -0.43
MCM8-202ENST00000378883 EIF4G1Q04637 1599 aaKnown RBP12.33□□□□□ -0.44
MCM8-202ENST00000378883 SCRIBQ14160 1630 aa12.33□□□□□ -0.44
MCM8-202ENST00000378883 RTN4Q9NQC3 1192 aaKnown RBP12.31□□□□□ -0.44
MCM8-202ENST00000378883 GOLGA3Q08378 1498 aa12.31□□□□□ -0.44
MCM8-202ENST00000378883 EEA1Q15075 1411 aa12.3□□□□□ -0.44
MCM8-202ENST00000378883 CCER2I3L3R5 266 aa12.3□□□□□ -0.44
MCM8-202ENST00000378883 IRX6P78412 446 aaPredicted RBP12.3□□□□□ -0.44
MCM8-202ENST00000378883 PAK3O75914 559 aaPredicted RBP12.29□□□□□ -0.44
MCM8-202ENST00000378883 RTL5Q5HYW3 569 aaPredicted RBP12.28□□□□□ -0.44
MCM8-202ENST00000378883 MROH2BQ7Z745 1585 aa12.26□□□□□ -0.45
MCM8-202ENST00000378883 CLIP1P30622 1438 aa12.26□□□□□ -0.45
MCM8-202ENST00000378883 VPS8Q8N3P4 1428 aa12.26□□□□□ -0.45
MCM8-202ENST00000378883 RUSC2Q8N2Y8 1516 aa12.25□□□□□ -0.45
MCM8-202ENST00000378883 CECR2Q9BXF3 1484 aa12.25□□□□□ -0.45
MCM8-202ENST00000378883 PPP1R15AO75807 674 aaPredicted RBP12.25□□□□□ -0.45
MCM8-202ENST00000378883 ANP32CO43423 234 aa12.24□□□□□ -0.45
MCM8-202ENST00000378883 NACADO15069 1562 aa12.24□□□□□ -0.45
MCM8-202ENST00000378883 PPP4R2Q9NY27 417 aa12.24□□□□□ -0.45
MCM8-202ENST00000378883 WIZO95785 1651 aa12.24□□□□□ -0.45
MCM8-202ENST00000378883 HNRNPUQ00839 825 aaKnown RBP eCLIP12.17□□□□□ -0.46
MCM8-202ENST00000378883 PABPN1Q86U42 306 aaKnown RBP eCLIP12.16□□□□□ -0.46
MCM8-202ENST00000378883 IPO9Q96P70 1041 aaKnown RBP12.16□□□□□ -0.46
MCM8-202ENST00000378883 B4GALNT3Q6L9W6 998 aa12.16□□□□□ -0.46
MCM8-202ENST00000378883 BAZ1AQ9NRL2 1556 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms