RNA–Protein interactions for RNA: ENST00000465027.1

COPS6-205, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 1 (best)

Gene COPS6, Length 1,171 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-205ENST00000465027 NISCHQ9Y2I1 1504 aa42.07■■■■■ 4.33
COPS6-205ENST00000465027 ABCC9O60706 1549 aa38.63■■■■□ 3.77
COPS6-205ENST00000465027 CCDC180Q9P1Z9 1646 aa37.9■■■■□ 3.66
COPS6-205ENST00000465027 DNAJC5BQ9UF47 199 aa36.79■■■■□ 3.48
COPS6-205ENST00000465027 RB1CC1Q8TDY2 1594 aa36.37■■■■□ 3.41
COPS6-205ENST00000465027 NACADO15069 1562 aa35.98■■■■□ 3.35
COPS6-205ENST00000465027 PABPN1Q86U42 306 aaKnown RBP eCLIP35.92■■■■□ 3.34
COPS6-205ENST00000465027 DCAF8L2P0C7V8 631 aa35.86■■■■□ 3.33
COPS6-205ENST00000465027 UNC13AQ9UPW8 1703 aa35.63■■■■□ 3.29
COPS6-205ENST00000465027 BICRAQ9NZM4 1560 aa35.44■■■■□ 3.26
COPS6-205ENST00000465027 MYO15BQ96JP2 1530 aa35.23■■■■□ 3.23
COPS6-205ENST00000465027 CC2D2AQ9P2K1 1620 aa34.81■■■■□ 3.16
COPS6-205ENST00000465027 CECR2Q9BXF3 1484 aa34.79■■■■□ 3.16
COPS6-205ENST00000465027 ZCCHC6Q5VYS8 1495 aaKnown RBP34.75■■■■□ 3.15
COPS6-205ENST00000465027 SHROOM4Q9ULL8 1493 aa34.7■■■■□ 3.15
COPS6-205ENST00000465027 SCRIBQ14160 1630 aa34.66■■■■□ 3.14
COPS6-205ENST00000465027 DCAF1Q9Y4B6 1507 aa34.61■■■■□ 3.13
COPS6-205ENST00000465027 EIF4G1Q04637 1599 aaKnown RBP34.57■■■■□ 3.13
COPS6-205ENST00000465027 DNAJC5Q9H3Z4 198 aa34.05■■■■□ 3.04
COPS6-205ENST00000465027 CUX2O14529 1486 aa33.37■■■□□ 2.93
COPS6-205ENST00000465027 ERCC6Q03468 1493 aa33.31■■■□□ 2.92
COPS6-205ENST00000465027 NCAPD3P42695 1498 aa33.25■■■□□ 2.91
COPS6-205ENST00000465027 ATAD2BQ9ULI0 1458 aa33.12■■■□□ 2.89
COPS6-205ENST00000465027 NESP48681 1621 aa33.05■■■□□ 2.88
COPS6-205ENST00000465027 SMARCA4P51532 1647 aa32.95■■■□□ 2.86
COPS6-205ENST00000465027 HMGXB3Q12766 1538 aa32.93■■■□□ 2.86
COPS6-205ENST00000465027 SMARCA2P51531 1590 aa32.92■■■□□ 2.86
COPS6-205ENST00000465027 BAZ1BQ9UIG0 1483 aaKnown RBP32.76■■■□□ 2.84
COPS6-205ENST00000465027 THOC2Q8NI27 1593 aaKnown RBP32.74■■■□□ 2.83
COPS6-205ENST00000465027 BAZ1AQ9NRL2 1556 aaPredicted RBP32.65■■■□□ 2.82
COPS6-205ENST00000465027 PEG3Q9GZU2 1588 aa32.56■■■□□ 2.8
COPS6-205ENST00000465027 LAMC3Q9Y6N6 1575 aa32.56■■■□□ 2.8
COPS6-205ENST00000465027 KIF21AQ7Z4S6 1674 aa32.54■■■□□ 2.8
COPS6-205ENST00000465027 MROH2BQ7Z745 1585 aa32.48■■■□□ 2.79
COPS6-205ENST00000465027 TRIM41Q8WV44 630 aa32.43■■■□□ 2.78
COPS6-205ENST00000465027 PDS5BQ9NTI5 1447 aa32.4■■■□□ 2.78
COPS6-205ENST00000465027 CADPSQ9ULU8 1353 aa32.23■■■□□ 2.75
COPS6-205ENST00000465027 MRC2Q9UBG0 1479 aa32.21■■■□□ 2.75
COPS6-205ENST00000465027 WDR62O43379 1518 aa32.13■■■□□ 2.73
COPS6-205ENST00000465027 WIZO95785 1651 aa32.06■■■□□ 2.72
COPS6-205ENST00000465027 CEP164Q9UPV0 1460 aa31.96■■■□□ 2.71
COPS6-205ENST00000465027 FANCD2Q9BXW9 1451 aa31.9■■■□□ 2.7
COPS6-205ENST00000465027 OSCARQ8IYS5 282 aa31.79■■■□□ 2.68
COPS6-205ENST00000465027 CFTRP13569 1480 aa31.75■■■□□ 2.67
COPS6-205ENST00000465027 URB2Q14146 1524 aaKnown RBP31.72■■■□□ 2.67
COPS6-205ENST00000465027 RSF1Q96T23 1441 aaPredicted RBP31.58■■■□□ 2.65
COPS6-205ENST00000465027 TOP2AP11388 1531 aaKnown RBP31.55■■■□□ 2.64
COPS6-205ENST00000465027 RIMBP3CA6NJZ7 1639 aa31.49■■■□□ 2.63
COPS6-205ENST00000465027 RIMBP3BA6NNM3 1639 aa31.49■■■□□ 2.63
COPS6-205ENST00000465027 RIMBP3Q9UFD9 1639 aa31.49■■■□□ 2.63
COPS6-205ENST00000465027 ZNF608Q9ULD9 1512 aaPredicted RBP31.44■■■□□ 2.62
COPS6-205ENST00000465027 PRDM2Q13029 1718 aa31.33■■■□□ 2.61
COPS6-205ENST00000465027 ARHGEF11O15085 1522 aa31.33■■■□□ 2.61
COPS6-205ENST00000465027 IFT140Q96RY7 1462 aa31.33■■■□□ 2.61
COPS6-205ENST00000465027 CCDC88BA6NC98 1476 aa31.25■■■□□ 2.59
COPS6-205ENST00000465027 TOPBP1Q92547 1522 aa31.24■■■□□ 2.59
COPS6-205ENST00000465027 EIF4G3O43432 1585 aaKnown RBP31.18■■■□□ 2.58
COPS6-205ENST00000465027 CYB5RLQ6IPT4 315 aa31.17■■■□□ 2.58
COPS6-205ENST00000465027 AQRO60306 1485 aaKnown RBP eCLIP31.08■■■□□ 2.57
COPS6-205ENST00000465027 CHD1O14646 1710 aa31.07■■■□□ 2.56
COPS6-205ENST00000465027 DNMBPQ6XZF7 1577 aa31.05■■■□□ 2.56
COPS6-205ENST00000465027 ARAP1Q96P48 1450 aa31.01■■■□□ 2.56
COPS6-205ENST00000465027 ABCC8Q09428 1581 aa31■■■□□ 2.55
COPS6-205ENST00000465027 TARBP1Q13395 1621 aaKnown RBP31■■■□□ 2.55
COPS6-205ENST00000465027 TRHP20396 242 aaPredicted RBP30.99■■■□□ 2.55
COPS6-205ENST00000465027 FBLN2P98095 1184 aa30.98■■■□□ 2.55
COPS6-205ENST00000465027 POLA1P09884 1462 aaPredicted RBP30.89■■■□□ 2.54
COPS6-205ENST00000465027 RAD54L2Q9Y4B4 1467 aa30.86■■■□□ 2.53
COPS6-205ENST00000465027 TDRD9Q8NDG6 1382 aaKnown RBP30.8■■■□□ 2.52
COPS6-205ENST00000465027 SOGA1O94964 1423 aa30.73■■■□□ 2.51
COPS6-205ENST00000465027 SNAPC4Q5SXM2 1469 aa30.72■■■□□ 2.51
COPS6-205ENST00000465027 CLASP1Q7Z460 1538 aa30.68■■■□□ 2.5
COPS6-205ENST00000465027 FGD5Q6ZNL6 1462 aa30.63■■■□□ 2.49
COPS6-205ENST00000465027 CHMP7Q8WUX9 453 aaPredicted RBP30.6■■■□□ 2.49
COPS6-205ENST00000465027 SYNJ1O43426 1573 aa30.55■■■□□ 2.48
COPS6-205ENST00000465027 CUX1P39880 1505 aa30.54■■■□□ 2.48
COPS6-205ENST00000465027 MAGI1Q96QZ7 1491 aaPredicted RBP30.52■■■□□ 2.48
COPS6-205ENST00000465027 WDR97A6NE52 1622 aa30.5■■■□□ 2.47
COPS6-205ENST00000465027 GRIN2BQ13224 1484 aa30.5■■■□□ 2.47
COPS6-205ENST00000465027 SYNJ2O15056 1496 aa30.46■■■□□ 2.47
COPS6-205ENST00000465027 AEBP2Q6ZN18 517 aaPredicted RBP30.44■■■□□ 2.46
COPS6-205ENST00000465027 GAPVD1Q14C86 1478 aa30.39■■■□□ 2.46
COPS6-205ENST00000465027 PBRM1Q86U86 1689 aa30.36■■■□□ 2.45
COPS6-205ENST00000465027 ERCC6L2Q5T890 1561 aa30.27■■■□□ 2.44
COPS6-205ENST00000465027 ABCA5Q8WWZ7 1642 aa30.22■■■□□ 2.43
COPS6-205ENST00000465027 ABCA10Q8WWZ4 1543 aa30.2■■■□□ 2.42
COPS6-205ENST00000465027 GRIN2AQ12879 1464 aa30.12■■■□□ 2.41
COPS6-205ENST00000465027 CEP170Q5SW79 1584 aa30.09■■■□□ 2.41
COPS6-205ENST00000465027 ADAMTS12P58397 1594 aa30.05■■■□□ 2.4
COPS6-205ENST00000465027 NUP160Q12769 1436 aa30.04■■■□□ 2.4
COPS6-205ENST00000465027 WRNQ14191 1432 aaPredicted RBP eCLIP29.96■■■□□ 2.39
COPS6-205ENST00000465027 SHROOM2Q13796 1616 aa29.95■■■□□ 2.38
COPS6-205ENST00000465027 FHAD1B1AJZ9 1412 aa29.91■■■□□ 2.38
COPS6-205ENST00000465027 KIF13AQ9H1H9 1805 aa29.89■■■□□ 2.38
COPS6-205ENST00000465027 SUPT5HO00267 1087 aaKnown RBP29.87■■■□□ 2.37
COPS6-205ENST00000465027 TOP2BQ02880 1626 aa29.83■■■□□ 2.37
COPS6-205ENST00000465027 BIVM-ERCC5R4GMW8 1640 aa29.83■■■□□ 2.37
COPS6-205ENST00000465027 PRG4Q92954 1404 aaPredicted RBP29.83■■■□□ 2.37
COPS6-205ENST00000465027 ERICH3Q5RHP9 1530 aa29.78■■■□□ 2.36
COPS6-205ENST00000465027 JPH4Q96JJ6 628 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms