RNA–Protein interactions for RNA: ENST00000419210.1

COPS6-203, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 218 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-203ENST00000419210 NISCHQ9Y2I1 1504 aa46.28■■■■■ 5
COPS6-203ENST00000419210 ABCC9O60706 1549 aa42.84■■■■■ 4.45
COPS6-203ENST00000419210 CCDC180Q9P1Z9 1646 aa42.03■■■■■ 4.32
COPS6-203ENST00000419210 DNAJC5BQ9UF47 199 aa40.82■■■■■ 4.13
COPS6-203ENST00000419210 RB1CC1Q8TDY2 1594 aa40.42■■■■■ 4.06
COPS6-203ENST00000419210 NACADO15069 1562 aa39.89■■■■□ 3.98
COPS6-203ENST00000419210 PABPN1Q86U42 306 aaKnown RBP eCLIP39.66■■■■□ 3.94
COPS6-203ENST00000419210 UNC13AQ9UPW8 1703 aa39.54■■■■□ 3.92
COPS6-203ENST00000419210 DCAF8L2P0C7V8 631 aa39.46■■■■□ 3.91
COPS6-203ENST00000419210 BICRAQ9NZM4 1560 aa39.21■■■■□ 3.87
COPS6-203ENST00000419210 MYO15BQ96JP2 1530 aa38.99■■■■□ 3.83
COPS6-203ENST00000419210 CC2D2AQ9P2K1 1620 aa38.67■■■■□ 3.78
COPS6-203ENST00000419210 CECR2Q9BXF3 1484 aa38.67■■■■□ 3.78
COPS6-203ENST00000419210 SHROOM4Q9ULL8 1493 aa38.62■■■■□ 3.77
COPS6-203ENST00000419210 EIF4G1Q04637 1599 aaKnown RBP38.36■■■■□ 3.73
COPS6-203ENST00000419210 SCRIBQ14160 1630 aa38.23■■■■□ 3.71
COPS6-203ENST00000419210 DNAJC5Q9H3Z4 198 aa38.19■■■■□ 3.7
COPS6-203ENST00000419210 ZCCHC6Q5VYS8 1495 aaKnown RBP38.18■■■■□ 3.7
COPS6-203ENST00000419210 DCAF1Q9Y4B6 1507 aa38.17■■■■□ 3.7
COPS6-203ENST00000419210 CUX2O14529 1486 aa37.3■■■■□ 3.56
COPS6-203ENST00000419210 ERCC6Q03468 1493 aa37.11■■■■□ 3.53
COPS6-203ENST00000419210 NCAPD3P42695 1498 aa36.76■■■■□ 3.48
COPS6-203ENST00000419210 ATAD2BQ9ULI0 1458 aa36.55■■■■□ 3.44
COPS6-203ENST00000419210 NESP48681 1621 aa36.52■■■■□ 3.44
COPS6-203ENST00000419210 HMGXB3Q12766 1538 aa36.49■■■■□ 3.43
COPS6-203ENST00000419210 SMARCA2P51531 1590 aa36.46■■■■□ 3.43
COPS6-203ENST00000419210 THOC2Q8NI27 1593 aaKnown RBP36.4■■■■□ 3.42
COPS6-203ENST00000419210 SMARCA4P51532 1647 aa36.35■■■■□ 3.41
COPS6-203ENST00000419210 TRIM41Q8WV44 630 aa36.25■■■■□ 3.39
COPS6-203ENST00000419210 BAZ1BQ9UIG0 1483 aaKnown RBP36.21■■■■□ 3.39
COPS6-203ENST00000419210 LAMC3Q9Y6N6 1575 aa36.18■■■■□ 3.38
COPS6-203ENST00000419210 KIF21AQ7Z4S6 1674 aa36.12■■■■□ 3.37
COPS6-203ENST00000419210 BAZ1AQ9NRL2 1556 aaPredicted RBP36.03■■■■□ 3.36
COPS6-203ENST00000419210 PEG3Q9GZU2 1588 aa35.96■■■■□ 3.35
COPS6-203ENST00000419210 PDS5BQ9NTI5 1447 aa35.95■■■■□ 3.35
COPS6-203ENST00000419210 MRC2Q9UBG0 1479 aa35.72■■■■□ 3.31
COPS6-203ENST00000419210 WDR62O43379 1518 aa35.67■■■■□ 3.3
COPS6-203ENST00000419210 MROH2BQ7Z745 1585 aa35.64■■■■□ 3.3
COPS6-203ENST00000419210 CADPSQ9ULU8 1353 aa35.6■■■■□ 3.29
COPS6-203ENST00000419210 CEP164Q9UPV0 1460 aa35.42■■■■□ 3.26
COPS6-203ENST00000419210 OSCARQ8IYS5 282 aa35.37■■■■□ 3.25
COPS6-203ENST00000419210 FANCD2Q9BXW9 1451 aa35.26■■■■□ 3.23
COPS6-203ENST00000419210 WIZO95785 1651 aa35.23■■■■□ 3.23
COPS6-203ENST00000419210 RIMBP3CA6NJZ7 1639 aa35.12■■■■□ 3.21
COPS6-203ENST00000419210 RIMBP3BA6NNM3 1639 aa35.12■■■■□ 3.21
COPS6-203ENST00000419210 RIMBP3Q9UFD9 1639 aa35.12■■■■□ 3.21
COPS6-203ENST00000419210 CFTRP13569 1480 aa35.03■■■■□ 3.2
COPS6-203ENST00000419210 URB2Q14146 1524 aaKnown RBP35.01■■■■□ 3.2
COPS6-203ENST00000419210 ARHGEF11O15085 1522 aa34.89■■■■□ 3.18
COPS6-203ENST00000419210 PRDM2Q13029 1718 aa34.78■■■■□ 3.16
COPS6-203ENST00000419210 TOP2AP11388 1531 aaKnown RBP34.72■■■■□ 3.15
COPS6-203ENST00000419210 ZNF608Q9ULD9 1512 aaPredicted RBP34.72■■■■□ 3.15
COPS6-203ENST00000419210 IFT140Q96RY7 1462 aa34.71■■■■□ 3.15
COPS6-203ENST00000419210 CYB5RLQ6IPT4 315 aa34.63■■■■□ 3.13
COPS6-203ENST00000419210 TRHP20396 242 aaPredicted RBP34.6■■■■□ 3.13
COPS6-203ENST00000419210 EIF4G3O43432 1585 aaKnown RBP34.58■■■■□ 3.13
COPS6-203ENST00000419210 RSF1Q96T23 1441 aaPredicted RBP34.54■■■■□ 3.12
COPS6-203ENST00000419210 CHD1O14646 1710 aa34.52■■■■□ 3.12
COPS6-203ENST00000419210 TOPBP1Q92547 1522 aa34.49■■■■□ 3.11
COPS6-203ENST00000419210 ARAP1Q96P48 1450 aa34.46■■■■□ 3.11
COPS6-203ENST00000419210 ABCC8Q09428 1581 aa34.36■■■■□ 3.09
COPS6-203ENST00000419210 DNMBPQ6XZF7 1577 aa34.32■■■■□ 3.09
COPS6-203ENST00000419210 FBLN2P98095 1184 aa34.28■■■■□ 3.08
COPS6-203ENST00000419210 AEBP2Q6ZN18 517 aaPredicted RBP34.28■■■■□ 3.08
COPS6-203ENST00000419210 AQRO60306 1485 aaKnown RBP eCLIP34.27■■■■□ 3.08
COPS6-203ENST00000419210 CCDC88BA6NC98 1476 aa34.27■■■■□ 3.08
COPS6-203ENST00000419210 TARBP1Q13395 1621 aaKnown RBP34.26■■■■□ 3.08
COPS6-203ENST00000419210 POLA1P09884 1462 aaPredicted RBP34.07■■■■□ 3.05
COPS6-203ENST00000419210 CLASP1Q7Z460 1538 aa34.02■■■■□ 3.04
COPS6-203ENST00000419210 SYNJ1O43426 1573 aa33.97■■■■□ 3.03
COPS6-203ENST00000419210 SNAPC4Q5SXM2 1469 aa33.96■■■■□ 3.03
COPS6-203ENST00000419210 RAD54L2Q9Y4B4 1467 aa33.95■■■■□ 3.02
COPS6-203ENST00000419210 TDRD9Q8NDG6 1382 aaKnown RBP33.92■■■■□ 3.02
COPS6-203ENST00000419210 WDR97A6NE52 1622 aa33.9■■■■□ 3.02
COPS6-203ENST00000419210 SOGA1O94964 1423 aa33.87■■■■□ 3.01
COPS6-203ENST00000419210 CHMP7Q8WUX9 453 aaPredicted RBP33.85■■■■□ 3.01
COPS6-203ENST00000419210 MAGI1Q96QZ7 1491 aaPredicted RBP33.82■■■■□ 3.01
COPS6-203ENST00000419210 FGD5Q6ZNL6 1462 aa33.76■■■□□ 2.99
COPS6-203ENST00000419210 SYNJ2O15056 1496 aa33.72■■■□□ 2.99
COPS6-203ENST00000419210 GRIN2BQ13224 1484 aa33.72■■■□□ 2.99
COPS6-203ENST00000419210 GAPVD1Q14C86 1478 aa33.71■■■□□ 2.99
COPS6-203ENST00000419210 PBRM1Q86U86 1689 aa33.64■■■□□ 2.98
COPS6-203ENST00000419210 CUX1P39880 1505 aa33.56■■■□□ 2.96
COPS6-203ENST00000419210 ERCC6L2Q5T890 1561 aa33.41■■■□□ 2.94
COPS6-203ENST00000419210 ABCA5Q8WWZ7 1642 aa33.38■■■□□ 2.93
COPS6-203ENST00000419210 CEP170Q5SW79 1584 aa33.3■■■□□ 2.92
COPS6-203ENST00000419210 GRIN2AQ12879 1464 aa33.3■■■□□ 2.92
COPS6-203ENST00000419210 ABCA10Q8WWZ4 1543 aa33.29■■■□□ 2.92
COPS6-203ENST00000419210 KIF13AQ9H1H9 1805 aa33.29■■■□□ 2.92
COPS6-203ENST00000419210 ADAMTS12P58397 1594 aa33.21■■■□□ 2.91
COPS6-203ENST00000419210 SHROOM2Q13796 1616 aa33.19■■■□□ 2.9
COPS6-203ENST00000419210 NUP160Q12769 1436 aa33.18■■■□□ 2.9
COPS6-203ENST00000419210 FHAD1B1AJZ9 1412 aa33.01■■■□□ 2.87
COPS6-203ENST00000419210 WRNQ14191 1432 aaPredicted RBP eCLIP32.99■■■□□ 2.87
COPS6-203ENST00000419210 PRG4Q92954 1404 aaPredicted RBP32.95■■■□□ 2.87
COPS6-203ENST00000419210 ABCC10Q5T3U5 1492 aa32.93■■■□□ 2.86
COPS6-203ENST00000419210 FAM69CQ0P6D2 419 aa32.93■■■□□ 2.86
COPS6-203ENST00000419210 KDM6BO15054 1643 aa32.88■■■□□ 2.85
COPS6-203ENST00000419210 DIP2BQ9P265 1576 aa32.88■■■□□ 2.85
COPS6-203ENST00000419210 ERICH3Q5RHP9 1530 aa32.88■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms