Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 PKD1-240ENST00000570253 603 ntTSL 518.39■□□□□ 0.531e-7■■□□□ 13.6
PRPF8Q6P2Q9 PKD1-232ENST00000566905 559 ntTSL 316.19■□□□□ 0.181e-7■■□□□ 13.6
PRPF8Q6P2Q9 PKD1-239ENST00000570193 596 ntTSL 513.07□□□□□ -0.321e-7■■□□□ 13.6
PRPF8Q6P2Q9 COBLL1-222ENST00000493921 507 ntTSL 36.22□□□□□ -1.414e-10■■□□□ 13.6
PRPF8Q6P2Q9 COBLL1-216ENST00000480873 714 ntTSL 33.1□□□□□ -1.914e-10■■□□□ 13.6
PRPF8Q6P2Q9 BRF1-210ENST00000547374 3809 ntTSL 510.63□□□□□ -0.712e-6■■□□□ 13.6
PRPF8Q6P2Q9 BRF1-222ENST00000635152 2876 ntTSL 210.16□□□□□ -0.782e-6■■□□□ 13.6
PRPF8Q6P2Q9 ZNF692-217ENST00000495731 461 ntTSL 323.35■■□□□ 1.332e-13■■□□□ 13.6
PRPF8Q6P2Q9 ZNF692-226ENST00000533647 548 ntTSL 318.99■□□□□ 0.632e-13■■□□□ 13.6
PRPF8Q6P2Q9 ZNF692-219ENST00000496231 656 ntTSL 317.28■□□□□ 0.362e-13■■□□□ 13.6
PRPF8Q6P2Q9 ZNF692-214ENST00000483223 901 ntTSL 315.21■□□□□ 0.022e-9■■□□□ 13.6
PRPF8Q6P2Q9 ZNF692-222ENST00000528141 576 ntTSL 414.29□□□□□ -0.122e-13■■□□□ 13.6
PRPF8Q6P2Q9 PCBP4-207ENST00000468324 704 ntTSL 311.69□□□□□ -0.547e-7■■□□□ 13.6
PRPF8Q6P2Q9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.23e-7■■□□□ 13.6
PRPF8Q6P2Q9 FLOT2-206ENST00000580805 2679 ntTSL 512.78□□□□□ -0.363e-7■■□□□ 13.6
PRPF8Q6P2Q9 FLOT2-204ENST00000577789 2503 ntTSL 512.74□□□□□ -0.373e-7■■□□□ 13.6
PRPF8Q6P2Q9 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.31□□□□□ -0.443e-7■■□□□ 13.6
PRPF8Q6P2Q9 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.643e-7■■□□□ 13.6
PRPF8Q6P2Q9 FLOT2-211ENST00000586827 1069 ntTSL 510.7□□□□□ -0.73e-7■■□□□ 13.6
PRPF8Q6P2Q9 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 12e-7■■□□□ 13.6
PRPF8Q6P2Q9 PANK2-202ENST00000336066 1843 ntTSL 1 (best)19.98■□□□□ 0.792e-7■■□□□ 13.6
PRPF8Q6P2Q9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.312e-7■■□□□ 13.6
PRPF8Q6P2Q9 PANK2-205ENST00000495692 967 ntTSL 316.69■□□□□ 0.262e-7■■□□□ 13.6
PRPF8Q6P2Q9 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC9.83□□□□□ -0.842e-7■■□□□ 13.6
PRPF8Q6P2Q9 FUS-207ENST00000487974 643 ntTSL 213.61□□□□□ -0.232e-6■■□□□ 13.6
PRPF8Q6P2Q9 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.372e-7■■□□□ 13.6
PRPF8Q6P2Q9 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.482e-7■■□□□ 13.6
PRPF8Q6P2Q9 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.512e-7■■□□□ 13.6
PRPF8Q6P2Q9 FARP1-229ENST00000600190 566 ntTSL 316.36■□□□□ 0.217e-7■■□□□ 13.6
PRPF8Q6P2Q9 NEPRO-224ENST00000496340 520 ntTSL 49.25□□□□□ -0.932e-7■■□□□ 13.6
PRPF8Q6P2Q9 NDRG1-223ENST00000522665 411 ntTSL 212.19□□□□□ -0.461e-8■■□□□ 13.6
PRPF8Q6P2Q9 NDRG1-217ENST00000521414 2349 ntTSL 210.4□□□□□ -0.741e-8■■□□□ 13.6
PRPF8Q6P2Q9 NDRG1-212ENST00000519278 3983 ntTSL 27.85□□□□□ -1.151e-8■■□□□ 13.6
PRPF8Q6P2Q9 CKB-203ENST00000553610 542 ntTSL 314.72□□□□□ -0.051e-7■■□□□ 13.6
PRPF8Q6P2Q9 CKB-210ENST00000554989 625 ntTSL 213.24□□□□□ -0.291e-7■■□□□ 13.6
PRPF8Q6P2Q9 SUB1-205ENST00000504789 570 ntTSL 416.68■□□□□ 0.262e-6■■□□□ 13.6
PRPF8Q6P2Q9 SUB1-213ENST00000515355 771 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.872e-6■■□□□ 13.6
PRPF8Q6P2Q9 SUB1-201ENST00000265073 3507 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.232e-6■■□□□ 13.6
PRPF8Q6P2Q9 SUB1-209ENST00000511615 1658 ntTSL 1 (best)7.26□□□□□ -1.252e-6■■□□□ 13.6
PRPF8Q6P2Q9 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.822e-6■■□□□ 13.6
PRPF8Q6P2Q9 SUB1-204ENST00000504016 509 ntTSL 30.33□□□□□ -2.362e-6■■□□□ 13.6
PRPF8Q6P2Q9 VDAC3-203ENST00000518563 719 ntTSL 221.78■■□□□ 1.082e-17■■□□□ 13.5
PRPF8Q6P2Q9 VDAC3-204ENST00000519072 1123 ntTSL 1 (best)12.07□□□□□ -0.482e-17■■□□□ 13.5
PRPF8Q6P2Q9 VDAC3-207ENST00000521348 784 ntTSL 511.91□□□□□ -0.52e-17■■□□□ 13.5
PRPF8Q6P2Q9 VDAC3-205ENST00000520115 580 ntTSL 49.93□□□□□ -0.822e-17■■□□□ 13.5
PRPF8Q6P2Q9 VDAC3-209ENST00000522069 625 ntTSL 59.19□□□□□ -0.942e-17■■□□□ 13.5
PRPF8Q6P2Q9 VDAC3-202ENST00000518495 531 ntTSL 32.54□□□□□ -22e-17■■□□□ 13.5
PRPF8Q6P2Q9 HDAC1-210ENST00000490081 1047 ntTSL 310.39□□□□□ -0.753e-11■■□□□ 13.5
PRPF8Q6P2Q9 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.317e-7■■□□□ 13.5
PRPF8Q6P2Q9 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.017e-7■■□□□ 13.5
PRPF8Q6P2Q9 MYSM1-206ENST00000489282 698 ntTSL 214.48□□□□□ -0.098e-7■■□□□ 13.5
PRPF8Q6P2Q9 MYSM1-205ENST00000483003 378 ntTSL 1 (best)13.67□□□□□ -0.228e-7■■□□□ 13.5
PRPF8Q6P2Q9 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.41■□□□□ 0.228e-7■■□□□ 13.5
PRPF8Q6P2Q9 MFSD10-204ENST00000507272 1575 ntTSL 513.06□□□□□ -0.328e-7■■□□□ 13.5
PRPF8Q6P2Q9 SUGP2-209ENST00000597280 814 ntTSL 312.08□□□□□ -0.482e-8■■□□□ 13.5
PRPF8Q6P2Q9 SUGP2-204ENST00000593795 747 ntTSL 511.85□□□□□ -0.512e-8■■□□□ 13.5
PRPF8Q6P2Q9 ARHGAP1-205ENST00000527588 2344 ntTSL 511.19□□□□□ -0.624e-11■■□□□ 13.5
PRPF8Q6P2Q9 ARHGAP1-203ENST00000525488 890 ntTSL 59.25□□□□□ -0.934e-11■■□□□ 13.5
PRPF8Q6P2Q9 PRPF8-204ENST00000572445 648 ntTSL 25.61□□□□□ -1.515e-7■■□□□ 13.5
PRPF8Q6P2Q9 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.45e-8■■□□□ 13.5
PRPF8Q6P2Q9 CPNE1-214ENST00000435747 400 ntTSL 39.87□□□□□ -0.835e-8■■□□□ 13.5
PRPF8Q6P2Q9 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.885e-8■■□□□ 13.5
PRPF8Q6P2Q9 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.275e-8■■□□□ 13.5
PRPF8Q6P2Q9 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.881e-9■■□□□ 13.5
PRPF8Q6P2Q9 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.16■□□□□ 0.824e-8■■□□□ 13.5
PRPF8Q6P2Q9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.354e-8■■□□□ 13.5
PRPF8Q6P2Q9 PCK2-215ENST00000561050 1856 ntTSL 215.39■□□□□ 0.054e-8■■□□□ 13.5
PRPF8Q6P2Q9 PCK2-206ENST00000558674 2189 ntTSL 213.65□□□□□ -0.224e-8■■□□□ 13.5
PRPF8Q6P2Q9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC12.99□□□□□ -0.334e-8■■□□□ 13.5
PRPF8Q6P2Q9 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC11.52□□□□□ -0.574e-8■■□□□ 13.5
PRPF8Q6P2Q9 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC10.83□□□□□ -0.684e-8■■□□□ 13.5
PRPF8Q6P2Q9 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC10.77□□□□□ -0.694e-8■■□□□ 13.5
PRPF8Q6P2Q9 SLC39A14-211ENST00000522881 560 ntTSL 510.35□□□□□ -0.759e-70■■□□□ 13.5
PRPF8Q6P2Q9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.31■□□□□ 0.361e-11■■□□□ 13.5
PRPF8Q6P2Q9 EIF4E2-212ENST00000478878 268 ntTSL 50.42□□□□□ -2.342e-6■■□□□ 13.5
PRPF8Q6P2Q9 PTOV1-211ENST00000598632 1073 ntTSL 217.63■□□□□ 0.413e-6■■□□□ 13.5
PRPF8Q6P2Q9 PTOV1-217ENST00000601501 564 ntTSL 213.58□□□□□ -0.243e-6■■□□□ 13.5
PRPF8Q6P2Q9 PTOV1-215ENST00000600793 426 ntTSL 510.7□□□□□ -0.73e-6■■□□□ 13.5
PRPF8Q6P2Q9 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.27□□□□□ -0.451e-6■■□□□ 13.5
PRPF8Q6P2Q9 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.681e-6■■□□□ 13.5
PRPF8Q6P2Q9 TFR2-206ENST00000465294 2763 ntTSL 210.33□□□□□ -0.761e-6■■□□□ 13.5
PRPF8Q6P2Q9 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.831e-6■■□□□ 13.5
PRPF8Q6P2Q9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.322e-6■■□□□ 13.5
PRPF8Q6P2Q9 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.112e-6■■□□□ 13.5
PRPF8Q6P2Q9 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.252e-6■■□□□ 13.5
PRPF8Q6P2Q9 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.42e-6■■□□□ 13.5
PRPF8Q6P2Q9 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.432e-6■■□□□ 13.5
PRPF8Q6P2Q9 HPCAL1-203ENST00000419810 4781 ntTSL 1 (best)10.41□□□□□ -0.742e-6■■□□□ 13.5
PRPF8Q6P2Q9 SEMA3B-201ENST00000416295 1088 ntTSL 515.09■□□□□ 0.011e-14■■□□□ 13.5
PRPF8Q6P2Q9 GRB7-214ENST00000584853 570 ntTSL 414.13□□□□□ -0.157e-10■■□□□ 13.5
PRPF8Q6P2Q9 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.362e-9■■□□□ 13.5
PRPF8Q6P2Q9 NUCB1-211ENST00000485798 938 ntTSL 312.88□□□□□ -0.353e-6■■□□□ 13.5
PRPF8Q6P2Q9 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.483e-6■■□□□ 13.5
PRPF8Q6P2Q9 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.673e-6■■□□□ 13.5
PRPF8Q6P2Q9 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC11.1□□□□□ -0.634e-8■■□□□ 13.5
PRPF8Q6P2Q9 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC10.51□□□□□ -0.734e-8■■□□□ 13.5
PRPF8Q6P2Q9 BCL2L1-205ENST00000422920 1157 ntTSL 221.95■■□□□ 1.12e-8■■□□□ 13.5
PRPF8Q6P2Q9 BCL2L1-209ENST00000456404 914 ntTSL 215.12■□□□□ 0.012e-8■■□□□ 13.5
PRPF8Q6P2Q9 BCL2L1-207ENST00000439267 781 ntTSL 210.85□□□□□ -0.672e-8■■□□□ 13.5
PRPF8Q6P2Q9 BCL2L1-204ENST00000420488 820 ntTSL 29.29□□□□□ -0.922e-8■■□□□ 13.5
Retrieved 100 of 73,762 protein–RNA pairs in 1431.8 ms