RNA–Protein interactions for RNA: ENST00000522069.5

VDAC3-209, Transcript of voltage dependent anion channel 3, humanhuman

TSL 5

Gene VDAC3, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-209ENST00000522069 NISCHQ9Y2I1 1504 aa26.33■■□□□ 1.81
VDAC3-209ENST00000522069 CCDC180Q9P1Z9 1646 aa23.76■■□□□ 1.39
VDAC3-209ENST00000522069 ABCC9O60706 1549 aa23.61■■□□□ 1.37
VDAC3-209ENST00000522069 RB1CC1Q8TDY2 1594 aa22.6■■□□□ 1.21
VDAC3-209ENST00000522069 NACADO15069 1562 aa22.45■■□□□ 1.18
VDAC3-209ENST00000522069 MYO15BQ96JP2 1530 aa22.2■■□□□ 1.14
VDAC3-209ENST00000522069 DNAJC5BQ9UF47 199 aa22.1■■□□□ 1.13
VDAC3-209ENST00000522069 DCAF8L2P0C7V8 631 aa22.04■■□□□ 1.12
VDAC3-209ENST00000522069 UNC13AQ9UPW8 1703 aa22.03■■□□□ 1.12
VDAC3-209ENST00000522069 PABPN1Q86U42 306 aaKnown RBP eCLIP21.89■■□□□ 1.09
VDAC3-209ENST00000522069 BICRAQ9NZM4 1560 aa21.87■■□□□ 1.09
VDAC3-209ENST00000522069 DCAF1Q9Y4B6 1507 aa21.85■■□□□ 1.09
VDAC3-209ENST00000522069 ZCCHC6Q5VYS8 1495 aaKnown RBP21.83■■□□□ 1.09
VDAC3-209ENST00000522069 SHROOM4Q9ULL8 1493 aa21.78■■□□□ 1.08
VDAC3-209ENST00000522069 SCRIBQ14160 1630 aa21.49■■□□□ 1.03
VDAC3-209ENST00000522069 AEBP2Q6ZN18 517 aaPredicted RBP21.41■■□□□ 1.02
VDAC3-209ENST00000522069 CC2D2AQ9P2K1 1620 aa21.4■■□□□ 1.02
VDAC3-209ENST00000522069 EIF4G1Q04637 1599 aaKnown RBP21.36■■□□□ 1.01
VDAC3-209ENST00000522069 CECR2Q9BXF3 1484 aa21.34■■□□□ 1.01
VDAC3-209ENST00000522069 CHIC1Q5VXU3 224 aa20.74■□□□□ 0.91
VDAC3-209ENST00000522069 NCAPD3P42695 1498 aa20.69■□□□□ 0.9
VDAC3-209ENST00000522069 SMARCA2P51531 1590 aa20.59■□□□□ 0.89
VDAC3-209ENST00000522069 HMGXB3Q12766 1538 aa20.58■□□□□ 0.89
VDAC3-209ENST00000522069 ATAD2BQ9ULI0 1458 aa20.57■□□□□ 0.88
VDAC3-209ENST00000522069 SMARCA4P51532 1647 aa20.56■□□□□ 0.88
VDAC3-209ENST00000522069 CUX2O14529 1486 aa20.54■□□□□ 0.88
VDAC3-209ENST00000522069 BAZ1AQ9NRL2 1556 aaPredicted RBP20.49■□□□□ 0.87
VDAC3-209ENST00000522069 DNAJC5Q9H3Z4 198 aa20.47■□□□□ 0.87
VDAC3-209ENST00000522069 ERCC6Q03468 1493 aa20.47■□□□□ 0.87
VDAC3-209ENST00000522069 PEG3Q9GZU2 1588 aa20.43■□□□□ 0.86
VDAC3-209ENST00000522069 BAZ1BQ9UIG0 1483 aaKnown RBP20.39■□□□□ 0.85
VDAC3-209ENST00000522069 LAMC3Q9Y6N6 1575 aa20.27■□□□□ 0.84
VDAC3-209ENST00000522069 NESP48681 1621 aa20.25■□□□□ 0.83
VDAC3-209ENST00000522069 MROH2BQ7Z745 1585 aa20.22■□□□□ 0.83
VDAC3-209ENST00000522069 THOC2Q8NI27 1593 aaKnown RBP20.17■□□□□ 0.82
VDAC3-209ENST00000522069 PDS5BQ9NTI5 1447 aa20.12■□□□□ 0.81
VDAC3-209ENST00000522069 KIF21AQ7Z4S6 1674 aa20.07■□□□□ 0.8
VDAC3-209ENST00000522069 CADPSQ9ULU8 1353 aa20.02■□□□□ 0.8
VDAC3-209ENST00000522069 WIZO95785 1651 aa19.97■□□□□ 0.79
VDAC3-209ENST00000522069 MRC2Q9UBG0 1479 aa19.93■□□□□ 0.78
VDAC3-209ENST00000522069 WDR62O43379 1518 aa19.91■□□□□ 0.78
VDAC3-209ENST00000522069 CEP164Q9UPV0 1460 aa19.85■□□□□ 0.77
VDAC3-209ENST00000522069 TOP2AP11388 1531 aaKnown RBP19.81■□□□□ 0.76
VDAC3-209ENST00000522069 CFTRP13569 1480 aa19.8■□□□□ 0.76
VDAC3-209ENST00000522069 RSF1Q96T23 1441 aaPredicted RBP19.79■□□□□ 0.76
VDAC3-209ENST00000522069 FANCD2Q9BXW9 1451 aa19.79■□□□□ 0.76
VDAC3-209ENST00000522069 PRDM2Q13029 1718 aa19.68■□□□□ 0.74
VDAC3-209ENST00000522069 URB2Q14146 1524 aaKnown RBP19.6■□□□□ 0.73
VDAC3-209ENST00000522069 CCDC88BA6NC98 1476 aa19.49■□□□□ 0.71
VDAC3-209ENST00000522069 OSCARQ8IYS5 282 aa19.48■□□□□ 0.71
VDAC3-209ENST00000522069 IFT140Q96RY7 1462 aa19.47■□□□□ 0.71
VDAC3-209ENST00000522069 ABCC8Q09428 1581 aa19.46■□□□□ 0.71
VDAC3-209ENST00000522069 TRIM41Q8WV44 630 aa19.44■□□□□ 0.7
VDAC3-209ENST00000522069 TOPBP1Q92547 1522 aa19.41■□□□□ 0.7
VDAC3-209ENST00000522069 DNMBPQ6XZF7 1577 aa19.37■□□□□ 0.69
VDAC3-209ENST00000522069 ZNF608Q9ULD9 1512 aaPredicted RBP19.33■□□□□ 0.68
VDAC3-209ENST00000522069 EIF4G3O43432 1585 aaKnown RBP19.31■□□□□ 0.68
VDAC3-209ENST00000522069 RIMBP3CA6NJZ7 1639 aa19.25■□□□□ 0.67
VDAC3-209ENST00000522069 RIMBP3BA6NNM3 1639 aa19.25■□□□□ 0.67
VDAC3-209ENST00000522069 TARBP1Q13395 1621 aaKnown RBP19.25■□□□□ 0.67
VDAC3-209ENST00000522069 RIMBP3Q9UFD9 1639 aa19.25■□□□□ 0.67
VDAC3-209ENST00000522069 WDR97A6NE52 1622 aa19.21■□□□□ 0.67
VDAC3-209ENST00000522069 POLA1P09884 1462 aaPredicted RBP19.21■□□□□ 0.67
VDAC3-209ENST00000522069 ARHGEF11O15085 1522 aa19.2■□□□□ 0.66
VDAC3-209ENST00000522069 CHD1O14646 1710 aa19.15■□□□□ 0.66
VDAC3-209ENST00000522069 AQRO60306 1485 aaKnown RBP eCLIP19.14■□□□□ 0.657e-7■■■■□ 24.5
VDAC3-209ENST00000522069 SOGA1O94964 1423 aa19.08■□□□□ 0.65
VDAC3-209ENST00000522069 FGD5Q6ZNL6 1462 aa19.05■□□□□ 0.64
VDAC3-209ENST00000522069 RAD54L2Q9Y4B4 1467 aa19.05■□□□□ 0.64
VDAC3-209ENST00000522069 MAGI1Q96QZ7 1491 aaPredicted RBP19.03■□□□□ 0.64
VDAC3-209ENST00000522069 CUX1P39880 1505 aa19.02■□□□□ 0.64
VDAC3-209ENST00000522069 TDRD9Q8NDG6 1382 aaKnown RBP19■□□□□ 0.63
VDAC3-209ENST00000522069 SNAPC4Q5SXM2 1469 aa19■□□□□ 0.63
VDAC3-209ENST00000522069 GRIN2BQ13224 1484 aa18.99■□□□□ 0.63
VDAC3-209ENST00000522069 SYNJ1O43426 1573 aa18.98■□□□□ 0.63
VDAC3-209ENST00000522069 ARAP1Q96P48 1450 aa18.98■□□□□ 0.63
VDAC3-209ENST00000522069 FBLN2P98095 1184 aa18.98■□□□□ 0.63
VDAC3-209ENST00000522069 CLASP1Q7Z460 1538 aa18.96■□□□□ 0.63
VDAC3-209ENST00000522069 CYB5RLQ6IPT4 315 aa18.95■□□□□ 0.62
VDAC3-209ENST00000522069 SYNJ2O15056 1496 aa18.94■□□□□ 0.62
VDAC3-209ENST00000522069 CHMP7Q8WUX9 453 aaPredicted RBP18.91■□□□□ 0.62
VDAC3-209ENST00000522069 PBRM1Q86U86 1689 aa18.91■□□□□ 0.62
VDAC3-209ENST00000522069 ABCA10Q8WWZ4 1543 aa18.9■□□□□ 0.62
VDAC3-209ENST00000522069 GAPVD1Q14C86 1478 aa18.89■□□□□ 0.61
VDAC3-209ENST00000522069 ABCA5Q8WWZ7 1642 aa18.87■□□□□ 0.61
VDAC3-209ENST00000522069 WRNQ14191 1432 aaPredicted RBP eCLIP18.8■□□□□ 0.6
VDAC3-209ENST00000522069 BIVM-ERCC5R4GMW8 1640 aa18.78■□□□□ 0.6
VDAC3-209ENST00000522069 TRHP20396 242 aaPredicted RBP18.77■□□□□ 0.6
VDAC3-209ENST00000522069 TOP2BQ02880 1626 aa18.77■□□□□ 0.6
VDAC3-209ENST00000522069 GRIN2AQ12879 1464 aa18.73■□□□□ 0.59
VDAC3-209ENST00000522069 SUPT5HO00267 1087 aaKnown RBP18.73■□□□□ 0.59
VDAC3-209ENST00000522069 ADAMTS12P58397 1594 aa18.72■□□□□ 0.59
VDAC3-209ENST00000522069 ERICH3Q5RHP9 1530 aa18.69■□□□□ 0.58
VDAC3-209ENST00000522069 NUP160Q12769 1436 aa18.68■□□□□ 0.58
VDAC3-209ENST00000522069 FHAD1B1AJZ9 1412 aa18.67■□□□□ 0.58
VDAC3-209ENST00000522069 CEP170Q5SW79 1584 aa18.64■□□□□ 0.57
VDAC3-209ENST00000522069 SHROOM2Q13796 1616 aa18.63■□□□□ 0.57
VDAC3-209ENST00000522069 ERCC6L2Q5T890 1561 aa18.55■□□□□ 0.56
VDAC3-209ENST00000522069 RUSC2Q8N2Y8 1516 aa18.47■□□□□ 0.55
VDAC3-209ENST00000522069 PRG4Q92954 1404 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms