RNA–Protein interactions for RNA: ENST00000504789.5

SUB1-205, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 4

Gene SUB1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-205ENST00000504789 NISCHQ9Y2I1 1504 aa48.34■■■■■ 5.33
SUB1-205ENST00000504789 CCDC180Q9P1Z9 1646 aa43.17■■■■■ 4.5
SUB1-205ENST00000504789 ABCC9O60706 1549 aa42.74■■■■■ 4.43
SUB1-205ENST00000504789 RB1CC1Q8TDY2 1594 aa40.89■■■■■ 4.14
SUB1-205ENST00000504789 NACADO15069 1562 aa40.74■■■■■ 4.11
SUB1-205ENST00000504789 DCAF8L2P0C7V8 631 aa40.61■■■■■ 4.09
SUB1-205ENST00000504789 MYO15BQ96JP2 1530 aa40.34■■■■■ 4.05
SUB1-205ENST00000504789 ZCCHC6Q5VYS8 1495 aaKnown RBP40.15■■■■■ 4.02
SUB1-205ENST00000504789 DCAF1Q9Y4B6 1507 aa39.98■■■■□ 3.99
SUB1-205ENST00000504789 UNC13AQ9UPW8 1703 aa39.92■■■■□ 3.98
SUB1-205ENST00000504789 PABPN1Q86U42 306 aaKnown RBP eCLIP39.87■■■■□ 3.97
SUB1-205ENST00000504789 DNAJC5BQ9UF47 199 aa39.71■■■■□ 3.95
SUB1-205ENST00000504789 BICRAQ9NZM4 1560 aa39.67■■■■□ 3.94
SUB1-205ENST00000504789 SCRIBQ14160 1630 aa39.34■■■■□ 3.89
SUB1-205ENST00000504789 SHROOM4Q9ULL8 1493 aa39.22■■■■□ 3.87
SUB1-205ENST00000504789 EIF4G1Q04637 1599 aaKnown RBP38.67■■■■□ 3.78
SUB1-205ENST00000504789 CC2D2AQ9P2K1 1620 aa38.63■■■■□ 3.78
SUB1-205ENST00000504789 CECR2Q9BXF3 1484 aa38.47■■■■□ 3.75
SUB1-205ENST00000504789 NCAPD3P42695 1498 aa37.61■■■■□ 3.61
SUB1-205ENST00000504789 SMARCA4P51532 1647 aa37.6■■■■□ 3.61
SUB1-205ENST00000504789 ATAD2BQ9ULI0 1458 aa37.55■■■■□ 3.6
SUB1-205ENST00000504789 BAZ1AQ9NRL2 1556 aaPredicted RBP37.5■■■■□ 3.59
SUB1-205ENST00000504789 SMARCA2P51531 1590 aa37.46■■■■□ 3.59
SUB1-205ENST00000504789 HMGXB3Q12766 1538 aa37.35■■■■□ 3.57
SUB1-205ENST00000504789 PEG3Q9GZU2 1588 aa37.25■■■■□ 3.55
SUB1-205ENST00000504789 MROH2BQ7Z745 1585 aa37.24■■■■□ 3.55
SUB1-205ENST00000504789 BAZ1BQ9UIG0 1483 aaKnown RBP37.2■■■■□ 3.54
SUB1-205ENST00000504789 ERCC6Q03468 1493 aa36.88■■■■□ 3.49
SUB1-205ENST00000504789 NESP48681 1621 aa36.83■■■■□ 3.49
SUB1-205ENST00000504789 WIZO95785 1651 aa36.8■■■■□ 3.48
SUB1-205ENST00000504789 LAMC3Q9Y6N6 1575 aa36.68■■■■□ 3.46
SUB1-205ENST00000504789 CUX2O14529 1486 aa36.68■■■■□ 3.46
SUB1-205ENST00000504789 RSF1Q96T23 1441 aaPredicted RBP36.64■■■■□ 3.46
SUB1-205ENST00000504789 CADPSQ9ULU8 1353 aa36.49■■■■□ 3.43
SUB1-205ENST00000504789 PDS5BQ9NTI5 1447 aa36.47■■■■□ 3.43
SUB1-205ENST00000504789 TOP2AP11388 1531 aaKnown RBP36.39■■■■□ 3.42
SUB1-205ENST00000504789 THOC2Q8NI27 1593 aaKnown RBP36.37■■■■□ 3.41
SUB1-205ENST00000504789 KIF21AQ7Z4S6 1674 aa36.35■■■■□ 3.41
SUB1-205ENST00000504789 DNAJC5Q9H3Z4 198 aa36.16■■■■□ 3.38
SUB1-205ENST00000504789 CFTRP13569 1480 aa36.16■■■■□ 3.38
SUB1-205ENST00000504789 MRC2Q9UBG0 1479 aa36.1■■■■□ 3.37
SUB1-205ENST00000504789 FANCD2Q9BXW9 1451 aa36.05■■■■□ 3.36
SUB1-205ENST00000504789 CEP164Q9UPV0 1460 aa36.05■■■■□ 3.36
SUB1-205ENST00000504789 WDR62O43379 1518 aa36■■■■□ 3.35
SUB1-205ENST00000504789 CCDC88BA6NC98 1476 aa35.98■■■■□ 3.35
SUB1-205ENST00000504789 PRDM2Q13029 1718 aa35.78■■■■□ 3.32
SUB1-205ENST00000504789 URB2Q14146 1524 aaKnown RBP35.72■■■■□ 3.31
SUB1-205ENST00000504789 TOPBP1Q92547 1522 aa35.42■■■■□ 3.26
SUB1-205ENST00000504789 ABCC8Q09428 1581 aa35.4■■■■□ 3.26
SUB1-205ENST00000504789 SUPT5HO00267 1087 aaKnown RBP35.34■■■■□ 3.25
SUB1-205ENST00000504789 IFT140Q96RY7 1462 aa35.32■■■■□ 3.24
SUB1-205ENST00000504789 DNMBPQ6XZF7 1577 aa35.32■■■■□ 3.24
SUB1-205ENST00000504789 ZNF608Q9ULD9 1512 aaPredicted RBP35.2■■■■□ 3.23
SUB1-205ENST00000504789 OSCARQ8IYS5 282 aa35.09■■■■□ 3.21
SUB1-205ENST00000504789 POLA1P09884 1462 aaPredicted RBP35.09■■■■□ 3.21
SUB1-205ENST00000504789 TARBP1Q13395 1621 aaKnown RBP35.06■■■■□ 3.2
SUB1-205ENST00000504789 EIF4G3O43432 1585 aaKnown RBP35.02■■■■□ 3.2
SUB1-205ENST00000504789 CUX1P39880 1505 aa34.96■■■■□ 3.19
SUB1-205ENST00000504789 SOGA1O94964 1423 aa34.95■■■■□ 3.19
SUB1-205ENST00000504789 AQRO60306 1485 aaKnown RBP eCLIP34.95■■■■□ 3.19
SUB1-205ENST00000504789 RAD54L2Q9Y4B4 1467 aa34.94■■■■□ 3.18
SUB1-205ENST00000504789 FGD5Q6ZNL6 1462 aa34.92■■■■□ 3.18
SUB1-205ENST00000504789 TDRD9Q8NDG6 1382 aaKnown RBP34.81■■■■□ 3.16
SUB1-205ENST00000504789 WDR97A6NE52 1622 aa34.77■■■■□ 3.16
SUB1-205ENST00000504789 TRIM41Q8WV44 630 aa34.73■■■■□ 3.15
SUB1-205ENST00000504789 CHD1O14646 1710 aa34.65■■■■□ 3.14
SUB1-205ENST00000504789 FBLN2P98095 1184 aa34.63■■■■□ 3.13
SUB1-205ENST00000504789 SNAPC4Q5SXM2 1469 aa34.6■■■■□ 3.13
SUB1-205ENST00000504789 GRIN2BQ13224 1484 aa34.59■■■■□ 3.13
SUB1-205ENST00000504789 ABCA10Q8WWZ4 1543 aa34.57■■■■□ 3.12
SUB1-205ENST00000504789 WRNQ14191 1432 aaPredicted RBP eCLIP34.56■■■■□ 3.12
SUB1-205ENST00000504789 MAGI1Q96QZ7 1491 aaPredicted RBP34.55■■■■□ 3.12
SUB1-205ENST00000504789 RIMBP3CA6NJZ7 1639 aa34.54■■■■□ 3.12
SUB1-205ENST00000504789 RIMBP3BA6NNM3 1639 aa34.54■■■■□ 3.12
SUB1-205ENST00000504789 RIMBP3Q9UFD9 1639 aa34.54■■■■□ 3.12
SUB1-205ENST00000504789 GAPVD1Q14C86 1478 aa34.52■■■■□ 3.12
SUB1-205ENST00000504789 TOP2BQ02880 1626 aa34.52■■■■□ 3.12
SUB1-205ENST00000504789 BIVM-ERCC5R4GMW8 1640 aa34.52■■■■□ 3.12
SUB1-205ENST00000504789 ARHGEF11O15085 1522 aa34.5■■■■□ 3.11
SUB1-205ENST00000504789 SYNJ1O43426 1573 aa34.48■■■■□ 3.11
SUB1-205ENST00000504789 CHMP7Q8WUX9 453 aaPredicted RBP34.47■■■■□ 3.11
SUB1-205ENST00000504789 ABCA5Q8WWZ7 1642 aa34.46■■■■□ 3.11
SUB1-205ENST00000504789 PBRM1Q86U86 1689 aa34.44■■■■□ 3.1
SUB1-205ENST00000504789 SYNJ2O15056 1496 aa34.42■■■■□ 3.1
SUB1-205ENST00000504789 CLASP1Q7Z460 1538 aa34.3■■■■□ 3.08
SUB1-205ENST00000504789 CYB5RLQ6IPT4 315 aa34.23■■■■□ 3.07
SUB1-205ENST00000504789 ARAP1Q96P48 1450 aa34.18■■■■□ 3.06
SUB1-205ENST00000504789 ADAMTS12P58397 1594 aa34.16■■■■□ 3.06
SUB1-205ENST00000504789 ERICH3Q5RHP9 1530 aa34.14■■■■□ 3.06
SUB1-205ENST00000504789 GRIN2AQ12879 1464 aa34.14■■■■□ 3.06
SUB1-205ENST00000504789 FHAD1B1AJZ9 1412 aa34.11■■■■□ 3.05
SUB1-205ENST00000504789 NUP160Q12769 1436 aa34.02■■■■□ 3.04
SUB1-205ENST00000504789 CEP170Q5SW79 1584 aa33.98■■■■□ 3.03
SUB1-205ENST00000504789 KIF27Q86VH2 1401 aa33.88■■■■□ 3.01
SUB1-205ENST00000504789 IGF1RP08069 1367 aa33.83■■■■□ 3.01
SUB1-205ENST00000504789 SHROOM2Q13796 1616 aa33.79■■■■□ 3
SUB1-205ENST00000504789 ERCC6L2Q5T890 1561 aa33.79■■■■□ 3
SUB1-205ENST00000504789 CUL7Q14999 1698 aa33.71■■■□□ 2.99
SUB1-205ENST00000504789 TRHP20396 242 aaPredicted RBP33.7■■■□□ 2.99
SUB1-205ENST00000504789 JPH4Q96JJ6 628 aa33.69■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms