RNA–Protein interactions for RNA: ENST00000511615.5

SUB1-209, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-209ENST00000511615 NISCHQ9Y2I1 1504 aa20.76■□□□□ 0.91
SUB1-209ENST00000511615 AEBP2Q6ZN18 517 aaPredicted RBP18.75■□□□□ 0.59
SUB1-209ENST00000511615 CCDC180Q9P1Z9 1646 aa18.12■□□□□ 0.49
SUB1-209ENST00000511615 CHIC1Q5VXU3 224 aa17.75■□□□□ 0.43
SUB1-209ENST00000511615 ZCCHC6Q5VYS8 1495 aaKnown RBP17.39■□□□□ 0.37
SUB1-209ENST00000511615 DCAF1Q9Y4B6 1507 aa17.25■□□□□ 0.35
SUB1-209ENST00000511615 ABCC9O60706 1549 aa17.23■□□□□ 0.35
SUB1-209ENST00000511615 MYO15BQ96JP2 1530 aa17.15■□□□□ 0.34
SUB1-209ENST00000511615 DCAF8L2P0C7V8 631 aa17.09■□□□□ 0.33
SUB1-209ENST00000511615 NACADO15069 1562 aa16.99■□□□□ 0.31
SUB1-209ENST00000511615 RB1CC1Q8TDY2 1594 aa16.82■□□□□ 0.28
SUB1-209ENST00000511615 SHROOM4Q9ULL8 1493 aa16.63■□□□□ 0.25
SUB1-209ENST00000511615 SCRIBQ14160 1630 aa16.53■□□□□ 0.24
SUB1-209ENST00000511615 UNC13AQ9UPW8 1703 aa16.34■□□□□ 0.21
SUB1-209ENST00000511615 BICRAQ9NZM4 1560 aa16.33■□□□□ 0.2
SUB1-209ENST00000511615 SUPT5HO00267 1087 aaKnown RBP16.3■□□□□ 0.2
SUB1-209ENST00000511615 PABPN1Q86U42 306 aaKnown RBP eCLIP16.26■□□□□ 0.19
SUB1-209ENST00000511615 CECR2Q9BXF3 1484 aa16.11■□□□□ 0.17
SUB1-209ENST00000511615 RSF1Q96T23 1441 aaPredicted RBP16.06■□□□□ 0.16
SUB1-209ENST00000511615 BAZ1AQ9NRL2 1556 aaPredicted RBP16.02■□□□□ 0.16
SUB1-209ENST00000511615 MROH2BQ7Z745 1585 aa15.98■□□□□ 0.15
SUB1-209ENST00000511615 SMARCA4P51532 1647 aa15.92■□□□□ 0.14
SUB1-209ENST00000511615 PEG3Q9GZU2 1588 aa15.84■□□□□ 0.13
SUB1-209ENST00000511615 SENP3Q9H4L4 574 aaPredicted RBP15.84■□□□□ 0.13
SUB1-209ENST00000511615 EIF4G1Q04637 1599 aaKnown RBP15.83■□□□□ 0.12
SUB1-209ENST00000511615 ATAD2BQ9ULI0 1458 aa15.79■□□□□ 0.12
SUB1-209ENST00000511615 WIZO95785 1651 aa15.77■□□□□ 0.11
SUB1-209ENST00000511615 SMARCA2P51531 1590 aa15.75■□□□□ 0.11
SUB1-209ENST00000511615 NCAPD3P42695 1498 aa15.75■□□□□ 0.11
SUB1-209ENST00000511615 PHF23Q9BUL5 403 aaPredicted RBP15.71■□□□□ 0.11
SUB1-209ENST00000511615 TOP2AP11388 1531 aaKnown RBP15.67■□□□□ 0.1
SUB1-209ENST00000511615 HMGXB3Q12766 1538 aa15.62■□□□□ 0.09
SUB1-209ENST00000511615 BAZ1BQ9UIG0 1483 aaKnown RBP15.62■□□□□ 0.09
SUB1-209ENST00000511615 CC2D2AQ9P2K1 1620 aa15.61■□□□□ 0.09
SUB1-209ENST00000511615 CCDC88BA6NC98 1476 aa15.55■□□□□ 0.08
SUB1-209ENST00000511615 DNAJC5BQ9UF47 199 aa15.47■□□□□ 0.07
SUB1-209ENST00000511615 TRIM41Q8WV44 630 aa15.32■□□□□ 0.04
SUB1-209ENST00000511615 CFTRP13569 1480 aa15.31■□□□□ 0.04
SUB1-209ENST00000511615 CADPSQ9ULU8 1353 aa15.3■□□□□ 0.04
SUB1-209ENST00000511615 LOC105371045A0A1W2PR82 267 aa15.25■□□□□ 0.03
SUB1-209ENST00000511615 LAMC3Q9Y6N6 1575 aa15.14■□□□□ 0.01
SUB1-209ENST00000511615 PCGF6Q9BYE7 350 aa15.11■□□□□ 0.01
SUB1-209ENST00000511615 HRCP23327 699 aa15.09■□□□□ 0.01
SUB1-209ENST00000511615 NESP48681 1621 aa15.09■□□□□ 0.01
SUB1-209ENST00000511615 WRNQ14191 1432 aaPredicted RBP eCLIP15.08■□□□□ 0
SUB1-209ENST00000511615 PDS5BQ9NTI5 1447 aa15.08■□□□□ 0
SUB1-209ENST00000511615 FANCD2Q9BXW9 1451 aa15.05■□□□□ 0
SUB1-209ENST00000511615 ABCC8Q09428 1581 aa15.04■□□□□ -0
SUB1-209ENST00000511615 FAM9AQ8IZU1 332 aaPredicted RBP15.03■□□□□ -0
SUB1-209ENST00000511615 PRDM2Q13029 1718 aa15.03■□□□□ -0
SUB1-209ENST00000511615 TRIM26Q12899 539 aaPredicted RBP15.02□□□□□ -0.01
SUB1-209ENST00000511615 CEP164Q9UPV0 1460 aa14.96□□□□□ -0.02
SUB1-209ENST00000511615 TOP2BQ02880 1626 aa14.96□□□□□ -0.02
SUB1-209ENST00000511615 CUX1P39880 1505 aa14.95□□□□□ -0.02
SUB1-209ENST00000511615 SYNJ1O43426 1573 aa14.94□□□□□ -0.02
SUB1-209ENST00000511615 BIVM-ERCC5R4GMW8 1640 aa14.91□□□□□ -0.02
SUB1-209ENST00000511615 DNMBPQ6XZF7 1577 aa14.87□□□□□ -0.03
SUB1-209ENST00000511615 URB2Q14146 1524 aaKnown RBP14.87□□□□□ -0.03
SUB1-209ENST00000511615 TOPBP1Q92547 1522 aa14.87□□□□□ -0.03
SUB1-209ENST00000511615 FOXD1Q16676 465 aa14.86□□□□□ -0.03
SUB1-209ENST00000511615 EEA1Q15075 1411 aa14.85□□□□□ -0.03
SUB1-209ENST00000511615 MRC2Q9UBG0 1479 aa14.84□□□□□ -0.03
SUB1-209ENST00000511615 KIF21AQ7Z4S6 1674 aa14.82□□□□□ -0.04
SUB1-209ENST00000511615 SOGA1O94964 1423 aa14.81□□□□□ -0.04
SUB1-209ENST00000511615 FGD5Q6ZNL6 1462 aa14.8□□□□□ -0.04
SUB1-209ENST00000511615 ERCC6Q03468 1493 aa14.79□□□□□ -0.04
SUB1-209ENST00000511615 POLA1P09884 1462 aaPredicted RBP14.78□□□□□ -0.04
SUB1-209ENST00000511615 EHMT2Q96KQ7 1210 aa14.78□□□□□ -0.04
SUB1-209ENST00000511615 CSRNP3Q8WYN3 585 aa14.77□□□□□ -0.04
SUB1-209ENST00000511615 WDR62O43379 1518 aa14.77□□□□□ -0.04
SUB1-209ENST00000511615 ZEB1P37275 1124 aaPredicted RBP14.76□□□□□ -0.05
SUB1-209ENST00000511615 RUSC2Q8N2Y8 1516 aa14.75□□□□□ -0.05
SUB1-209ENST00000511615 ABCA10Q8WWZ4 1543 aa14.74□□□□□ -0.05
SUB1-209ENST00000511615 KIF27Q86VH2 1401 aa14.74□□□□□ -0.05
SUB1-209ENST00000511615 CUX2O14529 1486 aa14.71□□□□□ -0.06
SUB1-209ENST00000511615 RAD54L2Q9Y4B4 1467 aa14.71□□□□□ -0.06
SUB1-209ENST00000511615 THOC2Q8NI27 1593 aaKnown RBP14.7□□□□□ -0.06
SUB1-209ENST00000511615 TNIKQ9UKE5 1360 aa14.7□□□□□ -0.06
SUB1-209ENST00000511615 IGF1RP08069 1367 aa14.69□□□□□ -0.06
SUB1-209ENST00000511615 IFT140Q96RY7 1462 aa14.66□□□□□ -0.06
SUB1-209ENST00000511615 TARBP1Q13395 1621 aaKnown RBP14.65□□□□□ -0.06
SUB1-209ENST00000511615 GOLGA3Q08378 1498 aa14.63□□□□□ -0.07
SUB1-209ENST00000511615 PRXQ9BXM0 1461 aa14.63□□□□□ -0.07
SUB1-209ENST00000511615 CEP162Q5TB80 1403 aa14.62□□□□□ -0.07
SUB1-209ENST00000511615 TDRD9Q8NDG6 1382 aaKnown RBP14.61□□□□□ -0.07
SUB1-209ENST00000511615 UBTFP17480 764 aaKnown RBP14.61□□□□□ -0.07
SUB1-209ENST00000511615 PPARGC1BQ86YN6 1023 aaKnown RBP14.59□□□□□ -0.07
SUB1-209ENST00000511615 GAPVD1Q14C86 1478 aa14.58□□□□□ -0.08
SUB1-209ENST00000511615 WDR97A6NE52 1622 aa14.58□□□□□ -0.08
SUB1-209ENST00000511615 CARMIL1Q5VZK9 1371 aa14.56□□□□□ -0.08
SUB1-209ENST00000511615 KIF21BO75037 1637 aa14.55□□□□□ -0.08
SUB1-209ENST00000511615 ABCA5Q8WWZ7 1642 aa14.55□□□□□ -0.08
SUB1-209ENST00000511615 ERICH3Q5RHP9 1530 aa14.55□□□□□ -0.08
SUB1-209ENST00000511615 AQRO60306 1485 aaKnown RBP eCLIP14.53□□□□□ -0.085e-10■■■■■ 39.2
SUB1-209ENST00000511615 ZNF608Q9ULD9 1512 aaPredicted RBP14.53□□□□□ -0.08
SUB1-209ENST00000511615 GRIN2BQ13224 1484 aa14.51□□□□□ -0.09
SUB1-209ENST00000511615 RAPGEF2Q9Y4G8 1499 aa14.51□□□□□ -0.09
SUB1-209ENST00000511615 DNAJC5Q9H3Z4 198 aa14.47□□□□□ -0.09
SUB1-209ENST00000511615 FHAD1B1AJZ9 1412 aa14.46□□□□□ -0.09
SUB1-209ENST00000511615 CUL7Q14999 1698 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms