RNA–Protein interactions for RNA: ENST00000572445.1

PRPF8-204, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-204ENST00000572445 CHIC1Q5VXU3 224 aa17.71■□□□□ 0.43
PRPF8-204ENST00000572445 AEBP2Q6ZN18 517 aaPredicted RBP17.42■□□□□ 0.38
PRPF8-204ENST00000572445 PHF23Q9BUL5 403 aaPredicted RBP15.77■□□□□ 0.12
PRPF8-204ENST00000572445 NISCHQ9Y2I1 1504 aa15.63■□□□□ 0.09
PRPF8-204ENST00000572445 PLPPR3Q6T4P5 718 aa14.68□□□□□ -0.06
PRPF8-204ENST00000572445 SENP3Q9H4L4 574 aaPredicted RBP14.46□□□□□ -0.09
PRPF8-204ENST00000572445 ABCC9O60706 1549 aa14.25□□□□□ -0.13
PRPF8-204ENST00000572445 CCDC180Q9P1Z9 1646 aa14.08□□□□□ -0.15
PRPF8-204ENST00000572445 EHMT2Q96KQ7 1210 aa13.92□□□□□ -0.18
PRPF8-204ENST00000572445 ADRA2BP18089 450 aa13.91□□□□□ -0.18
PRPF8-204ENST00000572445 KCNA4P22459 653 aa13.84□□□□□ -0.19
PRPF8-204ENST00000572445 PPP6R1Q9UPN7 881 aa13.65□□□□□ -0.22
PRPF8-204ENST00000572445 FOXD1Q16676 465 aa13.44□□□□□ -0.26
PRPF8-204ENST00000572445 RB1CC1Q8TDY2 1594 aa13.43□□□□□ -0.26
PRPF8-204ENST00000572445 DCAF8L2P0C7V8 631 aa13.37□□□□□ -0.27
PRPF8-204ENST00000572445 CSRNP3Q8WYN3 585 aa13.36□□□□□ -0.27
PRPF8-204ENST00000572445 DNAJC5BQ9UF47 199 aa13.3□□□□□ -0.28
PRPF8-204ENST00000572445 UNC13AQ9UPW8 1703 aa13.27□□□□□ -0.28
PRPF8-204ENST00000572445 NACADO15069 1562 aa13.26□□□□□ -0.29
PRPF8-204ENST00000572445 PABPN1Q86U42 306 aaKnown RBP eCLIP13.24□□□□□ -0.29
PRPF8-204ENST00000572445 SLC4A1APQ9BWU0 796 aaKnown RBP13.24□□□□□ -0.29
PRPF8-204ENST00000572445 PPP4R3CPQ6ZMV5 832 aa13.1□□□□□ -0.31
PRPF8-204ENST00000572445 BICRAQ9NZM4 1560 aa13.05□□□□□ -0.32
PRPF8-204ENST00000572445 SCRIBQ14160 1630 aa13□□□□□ -0.33
PRPF8-204ENST00000572445 ZCCHC6Q5VYS8 1495 aaKnown RBP12.96□□□□□ -0.34
PRPF8-204ENST00000572445 MYO15BQ96JP2 1530 aa12.92□□□□□ -0.34
PRPF8-204ENST00000572445 NCBP3Q53F19 620 aaKnown RBP12.87□□□□□ -0.35
PRPF8-204ENST00000572445 NPM3O75607 178 aaKnown RBP12.86□□□□□ -0.35
PRPF8-204ENST00000572445 PIAS4Q8N2W9 510 aaPredicted RBP12.83□□□□□ -0.36
PRPF8-204ENST00000572445 CC2D2AQ9P2K1 1620 aa12.83□□□□□ -0.36
PRPF8-204ENST00000572445 ZBTB22O15209 634 aa12.82□□□□□ -0.36
PRPF8-204ENST00000572445 DCAF1Q9Y4B6 1507 aa12.78□□□□□ -0.36
PRPF8-204ENST00000572445 CECR2Q9BXF3 1484 aa12.77□□□□□ -0.37
PRPF8-204ENST00000572445 EIF4G1Q04637 1599 aaKnown RBP12.75□□□□□ -0.37
PRPF8-204ENST00000572445 SHROOM4Q9ULL8 1493 aa12.7□□□□□ -0.38
PRPF8-204ENST00000572445 SLC24A1O60721 1099 aa12.55□□□□□ -0.4
PRPF8-204ENST00000572445 CNKSR2Q8WXI2 1034 aa12.49□□□□□ -0.41
PRPF8-204ENST00000572445 RTN4Q9NQC3 1192 aaKnown RBP12.48□□□□□ -0.41
PRPF8-204ENST00000572445 FOXD4L1Q9NU39 408 aa12.4□□□□□ -0.42
PRPF8-204ENST00000572445 AMER1Q5JTC6 1135 aaPredicted RBP12.31□□□□□ -0.44
PRPF8-204ENST00000572445 ERCC6Q03468 1493 aa12.31□□□□□ -0.44
PRPF8-204ENST00000572445 SMARCA4P51532 1647 aa12.28□□□□□ -0.44
PRPF8-204ENST00000572445 SCAF1Q9H7N4 1312 aaKnown RBP12.25□□□□□ -0.45
PRPF8-204ENST00000572445 NESP48681 1621 aa12.22□□□□□ -0.45
PRPF8-204ENST00000572445 ATAD2BQ9ULI0 1458 aa12.22□□□□□ -0.45
PRPF8-204ENST00000572445 SMARCA2P51531 1590 aa12.19□□□□□ -0.46
PRPF8-204ENST00000572445 NCAPD3P42695 1498 aa12.18□□□□□ -0.46
PRPF8-204ENST00000572445 HMGXB3Q12766 1538 aa12.17□□□□□ -0.46
PRPF8-204ENST00000572445 BAZ1BQ9UIG0 1483 aaKnown RBP12.17□□□□□ -0.46
PRPF8-204ENST00000572445 MAPK8IP2Q13387 824 aaPredicted RBP12.17□□□□□ -0.46
PRPF8-204ENST00000572445 DNAJC5Q9H3Z4 198 aa12.16□□□□□ -0.46
PRPF8-204ENST00000572445 CUX2O14529 1486 aa12.15□□□□□ -0.46
PRPF8-204ENST00000572445 BAZ1AQ9NRL2 1556 aaPredicted RBP12.15□□□□□ -0.46
PRPF8-204ENST00000572445 KIF21AQ7Z4S6 1674 aa12.12□□□□□ -0.47
PRPF8-204ENST00000572445 MROH2BQ7Z745 1585 aa12.11□□□□□ -0.47
PRPF8-204ENST00000572445 THOC2Q8NI27 1593 aaKnown RBP12.08□□□□□ -0.48
PRPF8-204ENST00000572445 RNF216Q9NWF9 866 aaPredicted RBP12.04□□□□□ -0.48
PRPF8-204ENST00000572445 WIZO95785 1651 aa12.03□□□□□ -0.48
PRPF8-204ENST00000572445 PEG3Q9GZU2 1588 aa12.02□□□□□ -0.49
PRPF8-204ENST00000572445 LAMC3Q9Y6N6 1575 aa12.01□□□□□ -0.49
PRPF8-204ENST00000572445 FKBP8Q14318 412 aa11.99□□□□□ -0.49
PRPF8-204ENST00000572445 SLC4A2P04920 1241 aa11.98□□□□□ -0.49
PRPF8-204ENST00000572445 MSH5O43196 834 aa11.91□□□□□ -0.5
PRPF8-204ENST00000572445 PDS5BQ9NTI5 1447 aa11.91□□□□□ -0.5
PRPF8-204ENST00000572445 MRC2Q9UBG0 1479 aa11.89□□□□□ -0.51
PRPF8-204ENST00000572445 CADPSQ9ULU8 1353 aa11.85□□□□□ -0.51
PRPF8-204ENST00000572445 TRIM41Q8WV44 630 aa11.85□□□□□ -0.51
PRPF8-204ENST00000572445 CEP164Q9UPV0 1460 aa11.84□□□□□ -0.51
PRPF8-204ENST00000572445 WDR62O43379 1518 aa11.84□□□□□ -0.51
PRPF8-204ENST00000572445 FANCD2Q9BXW9 1451 aa11.82□□□□□ -0.52
PRPF8-204ENST00000572445 ATXN8OSP0DMR3 200 aa11.81□□□□□ -0.52
PRPF8-204ENST00000572445 HOXD11P31277 338 aaPredicted RBP11.8□□□□□ -0.52
PRPF8-204ENST00000572445 TOP2AP11388 1531 aaKnown RBP11.8□□□□□ -0.52
PRPF8-204ENST00000572445 MYCNP04198 464 aaPredicted RBP11.77□□□□□ -0.53
PRPF8-204ENST00000572445 PRDM2Q13029 1718 aa11.77□□□□□ -0.53
PRPF8-204ENST00000572445 RSF1Q96T23 1441 aaPredicted RBP11.77□□□□□ -0.53
PRPF8-204ENST00000572445 URB2Q14146 1524 aaKnown RBP11.73□□□□□ -0.53
PRPF8-204ENST00000572445 DMRT2Q9Y5R5 561 aa11.73□□□□□ -0.53
PRPF8-204ENST00000572445 CFTRP13569 1480 aa11.7□□□□□ -0.54
PRPF8-204ENST00000572445 CCDC88BA6NC98 1476 aa11.63□□□□□ -0.55
PRPF8-204ENST00000572445 ZNF608Q9ULD9 1512 aaPredicted RBP11.62□□□□□ -0.55
PRPF8-204ENST00000572445 EIF4G3O43432 1585 aaKnown RBP11.6□□□□□ -0.55
PRPF8-204ENST00000572445 CHD1O14646 1710 aa11.59□□□□□ -0.55
PRPF8-204ENST00000572445 RIMBP3CA6NJZ7 1639 aa11.58□□□□□ -0.56
PRPF8-204ENST00000572445 RIMBP3BA6NNM3 1639 aa11.58□□□□□ -0.56
PRPF8-204ENST00000572445 RIMBP3Q9UFD9 1639 aa11.58□□□□□ -0.56
PRPF8-204ENST00000572445 TOPBP1Q92547 1522 aa11.58□□□□□ -0.56
PRPF8-204ENST00000572445 OSCARQ8IYS5 282 aa11.57□□□□□ -0.56
PRPF8-204ENST00000572445 ATF5Q9Y2D1 282 aaPredicted RBP11.57□□□□□ -0.56
PRPF8-204ENST00000572445 IFT140Q96RY7 1462 aa11.55□□□□□ -0.56
PRPF8-204ENST00000572445 DNMBPQ6XZF7 1577 aa11.54□□□□□ -0.56
PRPF8-204ENST00000572445 ARHGEF11O15085 1522 aa11.5□□□□□ -0.57
PRPF8-204ENST00000572445 FBLN2P98095 1184 aa11.49□□□□□ -0.57
PRPF8-204ENST00000572445 AQRO60306 1485 aaKnown RBP eCLIP11.49□□□□□ -0.574e-9■■■□□ 17
PRPF8-204ENST00000572445 TARBP1Q13395 1621 aaKnown RBP11.48□□□□□ -0.57
PRPF8-204ENST00000572445 RAD54L2Q9Y4B4 1467 aa11.47□□□□□ -0.57
PRPF8-204ENST00000572445 POLA1P09884 1462 aaPredicted RBP11.46□□□□□ -0.57
PRPF8-204ENST00000572445 ABCC8Q09428 1581 aa11.42□□□□□ -0.58
PRPF8-204ENST00000572445 FGD5Q6ZNL6 1462 aa11.42□□□□□ -0.58
PRPF8-204ENST00000572445 SNAPC4Q5SXM2 1469 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms